RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 KIF24Q5T7B8 1368 aa18.91■□□□□ 0.62
DDR1-253ENST00000504651 SLIT2O94813 1529 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 FAM208AQ9UK61 1670 aaKnown RBP18.9■□□□□ 0.62
DDR1-253ENST00000504651 CAMTA1Q9Y6Y1 1673 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 FAM83GA6ND36 823 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 ANP32CO43423 234 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 NGLY1Q96IV0 654 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
DDR1-253ENST00000504651 BLMP54132 1417 aaPredicted RBP18.9■□□□□ 0.62
DDR1-253ENST00000504651 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
DDR1-253ENST00000504651 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
DDR1-253ENST00000504651 HOXC9P31274 260 aa18.88■□□□□ 0.61
DDR1-253ENST00000504651 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
DDR1-253ENST00000504651 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
DDR1-253ENST00000504651 AFF2P51816 1311 aa18.87■□□□□ 0.61
DDR1-253ENST00000504651 BTG4Q9NY30 223 aa18.87■□□□□ 0.61
DDR1-253ENST00000504651 MYBBP1AQ9BQG0 1328 aaKnown RBP18.86■□□□□ 0.61
DDR1-253ENST00000504651 DIEXFQ68CQ4 756 aaKnown RBP18.86■□□□□ 0.61
DDR1-253ENST00000504651 IP6K1Q92551 441 aa18.86■□□□□ 0.61
DDR1-253ENST00000504651 INSRP06213 1382 aa18.85■□□□□ 0.61
DDR1-253ENST00000504651 MTHFSP49914 203 aa18.85■□□□□ 0.61
DDR1-253ENST00000504651 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
DDR1-253ENST00000504651 USP21Q9UK80 565 aa18.84■□□□□ 0.61
DDR1-253ENST00000504651 AXIN2Q9Y2T1 843 aa18.84■□□□□ 0.61
DDR1-253ENST00000504651 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
DDR1-253ENST00000504651 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.61
DDR1-253ENST00000504651 FNBP4Q8N3X1 1017 aaPredicted RBP18.83■□□□□ 0.6
DDR1-253ENST00000504651 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
DDR1-253ENST00000504651 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
DDR1-253ENST00000504651 ERBB3P21860 1342 aa18.82■□□□□ 0.6
DDR1-253ENST00000504651 HSP90AB2PQ58FF8 381 aa18.82■□□□□ 0.6
DDR1-253ENST00000504651 ANKRD24Q8TF21 1146 aa18.82■□□□□ 0.6
DDR1-253ENST00000504651 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
DDR1-253ENST00000504651 EVA1CP58658 441 aa18.81■□□□□ 0.6
DDR1-253ENST00000504651 UNC5CLQ8IV45 518 aa18.81■□□□□ 0.6
DDR1-253ENST00000504651 LTV1Q96GA3 475 aaPredicted RBP18.81■□□□□ 0.6
DDR1-253ENST00000504651 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
DDR1-253ENST00000504651 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
DDR1-253ENST00000504651 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
DDR1-253ENST00000504651 ATRNO75882 1429 aa18.79■□□□□ 0.6
DDR1-253ENST00000504651 CRB1P82279 1406 aa18.79■□□□□ 0.6
DDR1-253ENST00000504651 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
DDR1-253ENST00000504651 ZNF772Q68DY9 489 aaPredicted RBP18.78■□□□□ 0.6
DDR1-253ENST00000504651 CCDC9Q9Y3X0 531 aaKnown RBP18.78■□□□□ 0.6
DDR1-253ENST00000504651 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.6
DDR1-253ENST00000504651 LARP1Q6PKG0 1096 aaKnown RBP18.77■□□□□ 0.6
DDR1-253ENST00000504651 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
DDR1-253ENST00000504651 GLI3P10071 1580 aa18.76■□□□□ 0.59
DDR1-253ENST00000504651 TRPC5Q9UL62 973 aaPredicted RBP18.76■□□□□ 0.59
DDR1-253ENST00000504651 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
DDR1-253ENST00000504651 VPS72Q15906 364 aa18.75■□□□□ 0.59
DDR1-253ENST00000504651 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
DDR1-253ENST00000504651 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
DDR1-253ENST00000504651 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
DDR1-253ENST00000504651 SPATA31A5Q5VU36 1347 aa18.73■□□□□ 0.59
DDR1-253ENST00000504651 SPATA31A7Q8IWB4 1347 aa18.73■□□□□ 0.59
DDR1-253ENST00000504651 IL13P35225 146 aa18.72■□□□□ 0.59
DDR1-253ENST00000504651 CARD10Q9BWT7 1032 aa18.72■□□□□ 0.59
DDR1-253ENST00000504651 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
DDR1-253ENST00000504651 USP35Q9P2H5 1018 aa18.72■□□□□ 0.59
DDR1-253ENST00000504651 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
DDR1-253ENST00000504651 NCAPD2Q15021 1401 aa18.71■□□□□ 0.59
DDR1-253ENST00000504651 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
DDR1-253ENST00000504651 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
DDR1-253ENST00000504651 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
DDR1-253ENST00000504651 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
DDR1-253ENST00000504651 GJD4Q96KN9 370 aaPredicted RBP18.7■□□□□ 0.58
DDR1-253ENST00000504651 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
DDR1-253ENST00000504651 EYA1Q99502 592 aa18.7■□□□□ 0.58
DDR1-253ENST00000504651 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
DDR1-253ENST00000504651 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
DDR1-253ENST00000504651 LRRC37A3O60309 1634 aa18.68■□□□□ 0.58
DDR1-253ENST00000504651 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
DDR1-253ENST00000504651 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
DDR1-253ENST00000504651 THRAP3Q9Y2W1 955 aaKnown RBP18.68■□□□□ 0.58
DDR1-253ENST00000504651 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
DDR1-253ENST00000504651 POTEAQ6S8J7 498 aa18.67■□□□□ 0.58
DDR1-253ENST00000504651 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
DDR1-253ENST00000504651 MEGF6O75095 1541 aa18.66■□□□□ 0.58
DDR1-253ENST00000504651 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
DDR1-253ENST00000504651 MIER1Q8N108 512 aa18.66■□□□□ 0.58
DDR1-253ENST00000504651 FAM98CQ17RN3 349 aaKnown RBP18.65■□□□□ 0.58
DDR1-253ENST00000504651 SULT6B1Q6IMI4 303 aa18.65■□□□□ 0.58
DDR1-253ENST00000504651 PKD1L3Q7Z443 1732 aa18.65■□□□□ 0.58
DDR1-253ENST00000504651 KDRP35968 1356 aa18.65■□□□□ 0.58
DDR1-253ENST00000504651 A0A0G2JS52 829 aa18.64■□□□□ 0.57
DDR1-253ENST00000504651 HMOX1P09601 288 aa18.64■□□□□ 0.57
DDR1-253ENST00000504651 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
DDR1-253ENST00000504651 RXRBP28702 533 aa18.64■□□□□ 0.57
DDR1-253ENST00000504651 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDR1-253ENST00000504651 MYT1Q01538 1121 aa18.64■□□□□ 0.57
DDR1-253ENST00000504651 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
DDR1-253ENST00000504651 BARGINQ6ZT62 677 aa18.64■□□□□ 0.57
DDR1-253ENST00000504651 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
DDR1-253ENST00000504651 IL2RBP14784 551 aa18.63■□□□□ 0.57
DDR1-253ENST00000504651 AEBP1Q8IUX7 1158 aa18.63■□□□□ 0.57
DDR1-253ENST00000504651 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
DDR1-253ENST00000504651 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
DDR1-253ENST00000504651 OVOS2A0A0G2JMS6 1433 aa18.62■□□□□ 0.57
DDR1-253ENST00000504651 RGS12O14924 1447 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms