RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 IP6K1Q92551 441 aa15.15■□□□□ 0.02
TRIO-206ENST00000504606 CPDO75976 1380 aa15.14■□□□□ 0.01
TRIO-206ENST00000504606 KIAA0232Q92628 1395 aa15.14■□□□□ 0.01
TRIO-206ENST00000504606 IL13P35225 146 aa15.14■□□□□ 0.01
TRIO-206ENST00000504606 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
TRIO-206ENST00000504606 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
TRIO-206ENST00000504606 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
TRIO-206ENST00000504606 HSPA1LP34931 641 aa15.13■□□□□ 0.01
TRIO-206ENST00000504606 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRIO-206ENST00000504606 JCADQ9P266 1359 aa15.12■□□□□ 0.01
TRIO-206ENST00000504606 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
TRIO-206ENST00000504606 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
TRIO-206ENST00000504606 LTV1Q96GA3 475 aaPredicted RBP15.12■□□□□ 0.01
TRIO-206ENST00000504606 PRDM11Q9NQV5 511 aa15.12■□□□□ 0.01
TRIO-206ENST00000504606 COL18A1P39060 1754 aa15.11■□□□□ 0.01
TRIO-206ENST00000504606 ABCC6O95255 1503 aa15.11■□□□□ 0.01
TRIO-206ENST00000504606 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
TRIO-206ENST00000504606 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
TRIO-206ENST00000504606 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
TRIO-206ENST00000504606 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
TRIO-206ENST00000504606 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
TRIO-206ENST00000504606 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
TRIO-206ENST00000504606 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
TRIO-206ENST00000504606 HMOX1P09601 288 aa15.08■□□□□ 0
TRIO-206ENST00000504606 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
TRIO-206ENST00000504606 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
TRIO-206ENST00000504606 LMO7Q8WWI1 1683 aa15.08■□□□□ 0
TRIO-206ENST00000504606 ADAMTS2O95450 1211 aa15.07■□□□□ 0
TRIO-206ENST00000504606 EYA1Q99502 592 aa15.07■□□□□ 0
TRIO-206ENST00000504606 COL14A1Q05707 1796 aaKnown RBP15.06■□□□□ 0
TRIO-206ENST00000504606 FAM83GA6ND36 823 aa15.06■□□□□ 0
TRIO-206ENST00000504606 SULT6B1Q6IMI4 303 aa15.06■□□□□ 0
TRIO-206ENST00000504606 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
TRIO-206ENST00000504606 ERBB3P21860 1342 aa15.06■□□□□ 0
TRIO-206ENST00000504606 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
TRIO-206ENST00000504606 IGSF1Q8N6C5 1336 aa15.06■□□□□ 0
TRIO-206ENST00000504606 CAMTA1Q9Y6Y1 1673 aa15.06■□□□□ 0
TRIO-206ENST00000504606 RGPD2P0DJD1 1756 aa15.06■□□□□ 0
TRIO-206ENST00000504606 SENP3-EIF4A1A0A087X0R7 540 aa15.05■□□□□ -0
TRIO-206ENST00000504606 FCHSD2O94868 740 aa15.05■□□□□ -0
TRIO-206ENST00000504606 CSB-PGBD3P0DP91 1061 aa15.05■□□□□ -0
TRIO-206ENST00000504606 RUNDC1Q96C34 613 aa15.05■□□□□ -0
TRIO-206ENST00000504606 RSPH6AQ9H0K4 717 aa15.05■□□□□ -0
TRIO-206ENST00000504606 FAM208AQ9UK61 1670 aaKnown RBP15.04■□□□□ -0
TRIO-206ENST00000504606 PRKAR2BP31323 418 aa15.04■□□□□ -0
TRIO-206ENST00000504606 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
TRIO-206ENST00000504606 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
TRIO-206ENST00000504606 NBPF4Q96M43 638 aa15.04■□□□□ -0
TRIO-206ENST00000504606 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
TRIO-206ENST00000504606 MAPK8IP3Q9UPT6 1336 aa15.03■□□□□ -0
TRIO-206ENST00000504606 NEFMP07197 916 aa15.03■□□□□ -0
TRIO-206ENST00000504606 USHBP1Q8N6Y0 703 aa15.03■□□□□ -0
TRIO-206ENST00000504606 PLEKHF1Q96S99 279 aa15.03■□□□□ -0
TRIO-206ENST00000504606 PLCH1Q4KWH8 1693 aa15.03■□□□□ -0
TRIO-206ENST00000504606 KDRP35968 1356 aa15.02■□□□□ -0
TRIO-206ENST00000504606 APAF1O14727 1248 aa15.02■□□□□ -0
TRIO-206ENST00000504606 EVA1CP58658 441 aa15.02■□□□□ -0
TRIO-206ENST00000504606 STRN4Q9NRL3 753 aa15.02■□□□□ -0
TRIO-206ENST00000504606 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
TRIO-206ENST00000504606 BTG4Q9NY30 223 aa15.02■□□□□ -0
TRIO-206ENST00000504606 WDR17Q8IZU2 1322 aa15.01□□□□□ -0.01
TRIO-206ENST00000504606 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
TRIO-206ENST00000504606 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
TRIO-206ENST00000504606 LRP6O75581 1613 aa15.01□□□□□ -0.01
TRIO-206ENST00000504606 TCP11L2Q8N4U5 519 aa15□□□□□ -0.01
TRIO-206ENST00000504606 NCAPD2Q15021 1401 aa15□□□□□ -0.01
TRIO-206ENST00000504606 TOM1L2Q6ZVM7 507 aa14.99□□□□□ -0.01
TRIO-206ENST00000504606 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
TRIO-206ENST00000504606 NRAPQ86VF7 1730 aa14.98□□□□□ -0.01
TRIO-206ENST00000504606 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
TRIO-206ENST00000504606 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
TRIO-206ENST00000504606 PHACTR3Q96KR7 559 aa14.98□□□□□ -0.01
TRIO-206ENST00000504606 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
TRIO-206ENST00000504606 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
TRIO-206ENST00000504606 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
TRIO-206ENST00000504606 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
TRIO-206ENST00000504606 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
TRIO-206ENST00000504606 SLIT2O94813 1529 aa14.97□□□□□ -0.01
TRIO-206ENST00000504606 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
TRIO-206ENST00000504606 CRB1P82279 1406 aa14.96□□□□□ -0.01
TRIO-206ENST00000504606 NFE2L2Q16236 605 aa14.95□□□□□ -0.02
TRIO-206ENST00000504606 NGEFQ8N5V2 710 aa14.95□□□□□ -0.02
TRIO-206ENST00000504606 CARD10Q9BWT7 1032 aa14.95□□□□□ -0.02
TRIO-206ENST00000504606 RIPK4P57078 832 aa14.94□□□□□ -0.02
TRIO-206ENST00000504606 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
TRIO-206ENST00000504606 TATP17735 454 aaPredicted RBP14.93□□□□□ -0.02
TRIO-206ENST00000504606 MTHFSDQ2M296 383 aaKnown RBP14.93□□□□□ -0.02
TRIO-206ENST00000504606 GAS2L2Q8NHY3 880 aa14.93□□□□□ -0.02
TRIO-206ENST00000504606 USP35Q9P2H5 1018 aa14.93□□□□□ -0.02
TRIO-206ENST00000504606 MEGF6O75095 1541 aa14.92□□□□□ -0.02
TRIO-206ENST00000504606 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
TRIO-206ENST00000504606 PLEKHO1Q53GL0 409 aaPredicted RBP14.92□□□□□ -0.02
TRIO-206ENST00000504606 UNC5CLQ8IV45 518 aa14.92□□□□□ -0.02
TRIO-206ENST00000504606 FNBP4Q8N3X1 1017 aaPredicted RBP14.92□□□□□ -0.02
TRIO-206ENST00000504606 DLG5Q8TDM6 1919 aa14.92□□□□□ -0.02
TRIO-206ENST00000504606 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
TRIO-206ENST00000504606 USP21Q9UK80 565 aa14.91□□□□□ -0.02
TRIO-206ENST00000504606 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
TRIO-206ENST00000504606 PARP4Q9UKK3 1724 aaKnown RBP14.91□□□□□ -0.02
TRIO-206ENST00000504606 BCL9LQ86UU0 1499 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms