RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
SNX25-202ENST00000504273 UBE2Q2Q8WVN8 375 aa9.18□□□□□ -0.94
SNX25-202ENST00000504273 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
SNX25-202ENST00000504273 CDC42BPGQ6DT37 1551 aa9.18□□□□□ -0.94
SNX25-202ENST00000504273 CCDC27Q2M243 656 aa9.18□□□□□ -0.94
SNX25-202ENST00000504273 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
SNX25-202ENST00000504273 POGKQ9P215 609 aa9.18□□□□□ -0.94
SNX25-202ENST00000504273 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
SNX25-202ENST00000504273 CPSF1Q10570 1443 aaKnown RBP9.17□□□□□ -0.94
SNX25-202ENST00000504273 PRELPP51888 382 aa9.17□□□□□ -0.94
SNX25-202ENST00000504273 NEUROD2Q15784 382 aa9.17□□□□□ -0.94
SNX25-202ENST00000504273 BACH2Q9BYV9 841 aa9.17□□□□□ -0.94
SNX25-202ENST00000504273 PPP1R1BQ9UD71 204 aaPredicted RBP9.17□□□□□ -0.94
SNX25-202ENST00000504273 ATP7BP35670 1465 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 FBLN1P23142 703 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 PDE4AP27815 886 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
SNX25-202ENST00000504273 NCBP3Q53F19 620 aaKnown RBP9.16□□□□□ -0.94
SNX25-202ENST00000504273 C14orf37Q86TY3 774 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 WDR63Q8IWG1 891 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 TNNQ9UQP3 1299 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 TBX22Q9Y458 520 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 TECPR2O15040 1411 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 SPON1Q9HCB6 807 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
SNX25-202ENST00000504273 MARF1Q9Y4F3 1742 aaKnown RBP9.15□□□□□ -0.94
SNX25-202ENST00000504273 MS4A1P11836 297 aa9.15□□□□□ -0.94
SNX25-202ENST00000504273 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
SNX25-202ENST00000504273 STAG3Q9UJ98 1225 aa9.15□□□□□ -0.94
SNX25-202ENST00000504273 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
SNX25-202ENST00000504273 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
SNX25-202ENST00000504273 PLEKHG1Q9ULL1 1385 aa9.15□□□□□ -0.94
SNX25-202ENST00000504273 TOPAZ1Q8N9V7 1692 aa9.15□□□□□ -0.95
SNX25-202ENST00000504273 IGHDP01880 384 aa9.15□□□□□ -0.95
SNX25-202ENST00000504273 R3HDM1Q15032 1099 aaKnown RBP9.15□□□□□ -0.95
SNX25-202ENST00000504273 CFAP53Q96M91 514 aa9.15□□□□□ -0.95
SNX25-202ENST00000504273 NRKQ7Z2Y5 1582 aa9.14□□□□□ -0.95
SNX25-202ENST00000504273 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
SNX25-202ENST00000504273 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNX25-202ENST00000504273 ITSN1Q15811 1721 aa9.14□□□□□ -0.95
SNX25-202ENST00000504273 VIRMAQ69YN4 1812 aaKnown RBP9.14□□□□□ -0.95
SNX25-202ENST00000504273 ONECUT3O60422 494 aaPredicted RBP9.13□□□□□ -0.95
SNX25-202ENST00000504273 RLBP1P12271 317 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 PANK1Q8TE04 598 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 DLG5Q8TDM6 1919 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 ADAMTS2O95450 1211 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
SNX25-202ENST00000504273 POLKQ9UBT6 870 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
SNX25-202ENST00000504273 TMPOP42166 694 aaKnown RBP9.13□□□□□ -0.95
SNX25-202ENST00000504273 PDE3AQ14432 1141 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 PPIP5K1Q6PFW1 1433 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 PRR36Q9H6K5 1346 aa9.13□□□□□ -0.95
SNX25-202ENST00000504273 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.12□□□□□ -0.95
SNX25-202ENST00000504273 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 BRWD3Q6RI45 1802 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 NBPF14Q5TI25 921 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 IPO9Q96P70 1041 aaKnown RBP9.12□□□□□ -0.95
SNX25-202ENST00000504273 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
SNX25-202ENST00000504273 KCNQ2O43526 872 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 KRT27Q7Z3Y8 459 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
SNX25-202ENST00000504273 MST1RQ04912 1400 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNX25-202ENST00000504273 PODXL2Q9NZ53 605 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 AATKQ6ZMQ8 1374 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 EDC4Q6P2E9 1401 aaKnown RBP9.11□□□□□ -0.95
SNX25-202ENST00000504273 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.11□□□□□ -0.95
SNX25-202ENST00000504273 TSR2Q969E8 191 aaKnown RBP9.11□□□□□ -0.95
SNX25-202ENST00000504273 COG6Q9Y2V7 657 aa9.11□□□□□ -0.95
SNX25-202ENST00000504273 GLI3P10071 1580 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
SNX25-202ENST00000504273 NME9Q86XW9 330 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 U2SURPO15042 1029 aaKnown RBP9.1□□□□□ -0.95
SNX25-202ENST00000504273 C8orf34Q49A92 452 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 UNC5CLQ8IV45 518 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 NOP58Q9Y2X3 529 aaKnown RBP9.1□□□□□ -0.95
SNX25-202ENST00000504273 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
SNX25-202ENST00000504273 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 PEAK1Q9H792 1746 aa9.1□□□□□ -0.95
SNX25-202ENST00000504273 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
SNX25-202ENST00000504273 DIAPH1O60610 1272 aaKnown RBP9.09□□□□□ -0.95
SNX25-202ENST00000504273 NBR1Q14596 966 aa9.09□□□□□ -0.95
SNX25-202ENST00000504273 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
SNX25-202ENST00000504273 PCDHB15Q9Y5E8 787 aa9.09□□□□□ -0.95
SNX25-202ENST00000504273 EMILIN1Q9Y6C2 1016 aa9.09□□□□□ -0.95
SNX25-202ENST00000504273 IL13P35225 146 aa9.08□□□□□ -0.96
SNX25-202ENST00000504273 SEPT12Q8IYM1 358 aa9.08□□□□□ -0.96
SNX25-202ENST00000504273 PHACTR3Q96KR7 559 aa9.08□□□□□ -0.96
SNX25-202ENST00000504273 HSPA6P17066 643 aa9.08□□□□□ -0.96
SNX25-202ENST00000504273 EXOSC9Q06265 439 aaKnown RBP9.08□□□□□ -0.96
SNX25-202ENST00000504273 FRAT1Q92837 279 aaPredicted RBP9.08□□□□□ -0.96
SNX25-202ENST00000504273 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
SNX25-202ENST00000504273 IL16Q14005 1332 aa9.07□□□□□ -0.96
SNX25-202ENST00000504273 SLIT2O94813 1529 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms