RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 RGPD5Q99666 1765 aa25.3■■□□□ 1.64
SH3TC1-208ENST00000504223 FAM182BQ5T319 152 aa25.29■■□□□ 1.64
SH3TC1-208ENST00000504223 THRAP3Q9Y2W1 955 aaKnown RBP25.29■■□□□ 1.64
SH3TC1-208ENST00000504223 SOX12O15370 315 aa25.27■■□□□ 1.64
SH3TC1-208ENST00000504223 TMF1P82094 1093 aa25.27■■□□□ 1.64
SH3TC1-208ENST00000504223 DEFB132Q7Z7B7 95 aa25.27■■□□□ 1.64
SH3TC1-208ENST00000504223 MYOM1P52179 1685 aa25.26■■□□□ 1.63
SH3TC1-208ENST00000504223 SF3B2Q13435 895 aaKnown RBP25.26■■□□□ 1.63
SH3TC1-208ENST00000504223 ABCC6O95255 1503 aa25.26■■□□□ 1.63
SH3TC1-208ENST00000504223 SRCAPQ6ZRS2 3230 aa25.25■■□□□ 1.63
SH3TC1-208ENST00000504223 OVOS2A0A0J9YW53 1432 aa25.24■■□□□ 1.63
SH3TC1-208ENST00000504223 OVOS2Q6IE36 1432 aa25.24■■□□□ 1.63
SH3TC1-208ENST00000504223 WDR17Q8IZU2 1322 aa25.24■■□□□ 1.63
SH3TC1-208ENST00000504223 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
SH3TC1-208ENST00000504223 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
SH3TC1-208ENST00000504223 LTN1O94822 1766 aa25.22■■□□□ 1.63
SH3TC1-208ENST00000504223 RGPD1P0DJD0 1748 aa25.22■■□□□ 1.63
SH3TC1-208ENST00000504223 TOM1L2Q6ZVM7 507 aa25.2■■□□□ 1.62
SH3TC1-208ENST00000504223 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
SH3TC1-208ENST00000504223 FAM196AQ6ZSG2 479 aa25.19■■□□□ 1.62
SH3TC1-208ENST00000504223 TNS1Q9HBL0 1735 aaKnown RBP25.19■■□□□ 1.62
SH3TC1-208ENST00000504223 DISP2A7MBM2 1401 aa25.19■■□□□ 1.62
SH3TC1-208ENST00000504223 LRRC37A3O60309 1634 aa25.17■■□□□ 1.62
SH3TC1-208ENST00000504223 BAG6P46379 1132 aa25.17■■□□□ 1.62
SH3TC1-208ENST00000504223 WNK3Q9BYP7 1800 aa25.16■■□□□ 1.62
SH3TC1-208ENST00000504223 CARD10Q9BWT7 1032 aa25.16■■□□□ 1.62
SH3TC1-208ENST00000504223 HSPA5P11021 654 aaKnown RBP25.15■■□□□ 1.62
SH3TC1-208ENST00000504223 TRIM37O94972 964 aa25.13■■□□□ 1.61
SH3TC1-208ENST00000504223 CSB-PGBD3P0DP91 1061 aa25.13■■□□□ 1.61
SH3TC1-208ENST00000504223 EN1Q05925 392 aaPredicted RBP25.13■■□□□ 1.61
SH3TC1-208ENST00000504223 CDCA8Q53HL2 280 aa25.13■■□□□ 1.61
SH3TC1-208ENST00000504223 ERBB3P21860 1342 aa25.12■■□□□ 1.61
SH3TC1-208ENST00000504223 PEAK1Q9H792 1746 aa25.12■■□□□ 1.61
SH3TC1-208ENST00000504223 KIF20BQ96Q89 1820 aa25.12■■□□□ 1.61
SH3TC1-208ENST00000504223 FBLN1P23142 703 aa25.11■■□□□ 1.61
SH3TC1-208ENST00000504223 EIF4G2P78344 907 aaKnown RBP eCLIP25.11■■□□□ 1.61
SH3TC1-208ENST00000504223 CARD14Q9BXL6 1004 aa25.11■■□□□ 1.61
SH3TC1-208ENST00000504223 CCDC7Q96M83 1385 aa25.1■■□□□ 1.61
SH3TC1-208ENST00000504223 DDB1Q16531 1140 aa25.1■■□□□ 1.61
SH3TC1-208ENST00000504223 CDCA7Q9BWT1 371 aaPredicted RBP25.1■■□□□ 1.61
SH3TC1-208ENST00000504223 OVOS2A0A0G2JMS6 1433 aa25.1■■□□□ 1.61
SH3TC1-208ENST00000504223 FYB1O15117 783 aa25.09■■□□□ 1.61
SH3TC1-208ENST00000504223 COG3Q96JB2 828 aa25.09■■□□□ 1.61
SH3TC1-208ENST00000504223 CAMKK2Q96RR4 588 aa25.07■■□□□ 1.6
SH3TC1-208ENST00000504223 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
SH3TC1-208ENST00000504223 C11orf95C9JLR9 678 aaPredicted RBP25.06■■□□□ 1.6
SH3TC1-208ENST00000504223 ANKRD24Q8TF21 1146 aa25.06■■□□□ 1.6
SH3TC1-208ENST00000504223 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
SH3TC1-208ENST00000504223 APBA3O96018 575 aa25.05■■□□□ 1.6
SH3TC1-208ENST00000504223 EZH2Q15910 746 aaKnown RBP25.05■■□□□ 1.6
SH3TC1-208ENST00000504223 IP6K1Q92551 441 aa25.05■■□□□ 1.6
SH3TC1-208ENST00000504223 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
SH3TC1-208ENST00000504223 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
SH3TC1-208ENST00000504223 PARD3Q8TEW0 1356 aa25.04■■□□□ 1.6
SH3TC1-208ENST00000504223 BCL9O00512 1426 aa25.03■■□□□ 1.6
SH3TC1-208ENST00000504223 NLRP2Q9NX02 1062 aa25.03■■□□□ 1.6
SH3TC1-208ENST00000504223 POLR3GLQ9BT43 218 aa25.02■■□□□ 1.6
SH3TC1-208ENST00000504223 TNS2Q63HR2 1409 aa25.02■■□□□ 1.6
SH3TC1-208ENST00000504223 RGPD2P0DJD1 1756 aa25■■□□□ 1.59
SH3TC1-208ENST00000504223 EXOC5O00471 708 aa24.99■■□□□ 1.59
SH3TC1-208ENST00000504223 HOXC9P31274 260 aa24.99■■□□□ 1.59
SH3TC1-208ENST00000504223 RRS1Q15050 365 aaKnown RBP24.99■■□□□ 1.59
SH3TC1-208ENST00000504223 RREB1Q92766 1687 aa24.99■■□□□ 1.59
SH3TC1-208ENST00000504223 SBF2Q86WG5 1849 aa24.98■■□□□ 1.59
SH3TC1-208ENST00000504223 RTL1A6NKG5 1358 aa24.98■■□□□ 1.59
SH3TC1-208ENST00000504223 FAM208AQ9UK61 1670 aaKnown RBP24.97■■□□□ 1.59
SH3TC1-208ENST00000504223 PSDA5PKW4 1024 aaPredicted RBP24.97■■□□□ 1.59
SH3TC1-208ENST00000504223 IL2RBP14784 551 aa24.97■■□□□ 1.59
SH3TC1-208ENST00000504223 PTF1AQ7RTS3 328 aa24.96■■□□□ 1.59
SH3TC1-208ENST00000504223 AMPHP49418 695 aa24.95■■□□□ 1.58
SH3TC1-208ENST00000504223 LTV1Q96GA3 475 aaPredicted RBP24.95■■□□□ 1.58
SH3TC1-208ENST00000504223 BCL11BQ9C0K0 894 aaPredicted RBP24.95■■□□□ 1.58
SH3TC1-208ENST00000504223 NUP188Q5SRE5 1749 aa24.93■■□□□ 1.58
SH3TC1-208ENST00000504223 RGPD3A6NKT7 1758 aaPredicted RBP24.93■■□□□ 1.58
SH3TC1-208ENST00000504223 RGPD4Q7Z3J3 1758 aa24.93■■□□□ 1.58
SH3TC1-208ENST00000504223 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
SH3TC1-208ENST00000504223 R3HDM1Q15032 1099 aaKnown RBP24.92■■□□□ 1.58
SH3TC1-208ENST00000504223 PLSCR1O15162 318 aa24.9■■□□□ 1.58
SH3TC1-208ENST00000504223 PANK3Q9H999 370 aa24.9■■□□□ 1.58
SH3TC1-208ENST00000504223 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.58
SH3TC1-208ENST00000504223 LRP5O75197 1615 aa24.89■■□□□ 1.57
SH3TC1-208ENST00000504223 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.57
SH3TC1-208ENST00000504223 CGNL1Q0VF96 1302 aa24.88■■□□□ 1.57
SH3TC1-208ENST00000504223 EMILIN1Q9Y6C2 1016 aa24.88■■□□□ 1.57
SH3TC1-208ENST00000504223 KIF7Q2M1P5 1343 aa24.87■■□□□ 1.57
SH3TC1-208ENST00000504223 HSP90AB2PQ58FF8 381 aa24.87■■□□□ 1.57
SH3TC1-208ENST00000504223 INSRP06213 1382 aa24.87■■□□□ 1.57
SH3TC1-208ENST00000504223 NHSQ6T4R5 1651 aa24.87■■□□□ 1.57
SH3TC1-208ENST00000504223 FLT4P35916 1363 aa24.86■■□□□ 1.57
SH3TC1-208ENST00000504223 KCNQ2O43526 872 aa24.85■■□□□ 1.57
SH3TC1-208ENST00000504223 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
SH3TC1-208ENST00000504223 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
SH3TC1-208ENST00000504223 SHANK3Q9BYB0 1731 aa24.84■■□□□ 1.57
SH3TC1-208ENST00000504223 MEGF6O75095 1541 aa24.84■■□□□ 1.57
SH3TC1-208ENST00000504223 SMG6Q86US8 1419 aaKnown RBP24.84■■□□□ 1.57
SH3TC1-208ENST00000504223 PROM2Q8N271 834 aa24.83■■□□□ 1.57
SH3TC1-208ENST00000504223 NBPF14Q5TI25 921 aa24.82■■□□□ 1.56
SH3TC1-208ENST00000504223 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
SH3TC1-208ENST00000504223 ACSBG1Q96GR2 724 aa24.81■■□□□ 1.56
SH3TC1-208ENST00000504223 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms