RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SPATA31A6Q5VVP1 1343 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 CHGAP10645 457 aaKnown RBP5.78□□□□□ -1.48
USP46-205ENST00000504078 RXRBP28702 533 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 NOS1P29475 1434 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 KANK4Q5T7N3 995 aaPredicted RBP5.78□□□□□ -1.48
USP46-205ENST00000504078 ZNF772Q68DY9 489 aaPredicted RBP5.78□□□□□ -1.48
USP46-205ENST00000504078 CRISPLD2Q9H0B8 497 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 KIAA1468Q9P260 1216 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 CHIC2Q9UKJ5 165 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 KANK1Q14678 1352 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 PLEKHG1Q9ULL1 1385 aa5.78□□□□□ -1.48
USP46-205ENST00000504078 CDK12Q9NYV4 1490 aaPredicted RBP5.77□□□□□ -1.49
USP46-205ENST00000504078 XRN1Q8IZH2 1706 aaKnown RBP5.77□□□□□ -1.49
USP46-205ENST00000504078 UNC13BO14795 1591 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 ADAMTS13Q76LX8 1427 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 VPS8Q8N3P4 1428 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 PTPRUQ92729 1446 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 COL9A1P20849 921 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 FBXW7Q969H0 707 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.77□□□□□ -1.49
USP46-205ENST00000504078 TRPM2O94759 1503 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 NRXN3Q9Y4C0 1643 aa5.77□□□□□ -1.49
USP46-205ENST00000504078 ADAMTS2O95450 1211 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 FAM98CQ17RN3 349 aaKnown RBP5.76□□□□□ -1.49
USP46-205ENST00000504078 BRINP3Q76B58 766 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 LRCH3Q96II8 777 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 RYDENQ9NUL5 291 aaKnown RBP5.76□□□□□ -1.49
USP46-205ENST00000504078 PDZRN3Q9UPQ7 1066 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 HPS5Q9UPZ3 1129 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 PNPLA6Q8IY17 1366 aa5.76□□□□□ -1.49
USP46-205ENST00000504078 E9PCH4 1651 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 MST1RQ04912 1400 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 ATF3P18847 181 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 PDE4AP27815 886 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 MAP3K9P80192 1104 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 RSPH4AQ5TD94 716 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 PCDHGA10Q9Y5H3 936 aa5.75□□□□□ -1.49
USP46-205ENST00000504078 SRCAPQ6ZRS2 3230 aa5.74□□□□□ -1.49
USP46-205ENST00000504078 TJAP1Q5JTD0 557 aa5.74□□□□□ -1.49
USP46-205ENST00000504078 TYW1BQ6NUM6 668 aa5.74□□□□□ -1.49
USP46-205ENST00000504078 HS6ST3Q8IZP7 471 aa5.74□□□□□ -1.49
USP46-205ENST00000504078 ATAD2Q6PL18 1390 aa5.74□□□□□ -1.49
USP46-205ENST00000504078 ANKRD30AQ9BXX3 1397 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 PHF14O94880 888 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 PPP4CP60510 307 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 PPP1R18Q6NYC8 613 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 CADPS2Q86UW7 1296 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 SETD5Q9C0A6 1442 aa5.73□□□□□ -1.49
USP46-205ENST00000504078 TRIM6-TRIM34B2RNG4 842 aa5.72□□□□□ -1.49
USP46-205ENST00000504078 QTRT2Q9H974 415 aaKnown RBP5.72□□□□□ -1.49
USP46-205ENST00000504078 IL21Q9HBE4 155 aa5.72□□□□□ -1.49
USP46-205ENST00000504078 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.72□□□□□ -1.49
USP46-205ENST00000504078 SEPT9Q9UHD8 586 aaPredicted RBP5.72□□□□□ -1.49
USP46-205ENST00000504078 ADGRL3Q9HAR2 1447 aa5.72□□□□□ -1.49
USP46-205ENST00000504078 ADGRL2O95490 1459 aa5.71□□□□□ -1.49
USP46-205ENST00000504078 RPRD2Q5VT52 1461 aaKnown RBP5.71□□□□□ -1.49
USP46-205ENST00000504078 RBM6P78332 1123 aaKnown RBP5.71□□□□□ -1.5
USP46-205ENST00000504078 AMOTL2Q9Y2J4 779 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 ATRNO75882 1429 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 DCCP43146 1447 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 ANKRD50Q9ULJ7 1429 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 EP400Q96L91 3159 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 SPHKAPQ2M3C7 1700 aa5.71□□□□□ -1.5
USP46-205ENST00000504078 LRP5O75197 1615 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 IQGAP3Q86VI3 1631 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 METP08581 1390 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 NGLY1Q96IV0 654 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 USP21Q9UK80 565 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 GLI3P10071 1580 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 MARF1Q9Y4F3 1742 aaKnown RBP5.7□□□□□ -1.5
USP46-205ENST00000504078 C1orf167Q5SNV9 1468 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 CLTCL1P53675 1640 aa5.7□□□□□ -1.5
USP46-205ENST00000504078 BRWD3Q6RI45 1802 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 NCOA3Q9Y6Q9 1424 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 XPCQ01831 940 aaPredicted RBP5.69□□□□□ -1.5
USP46-205ENST00000504078 FAM50AQ14320 339 aaKnown RBP5.69□□□□□ -1.5
USP46-205ENST00000504078 C6orf132Q5T0Z8 1188 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 DEFB132Q7Z7B7 95 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 EPAS1Q99814 870 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 SLC52A1Q9NWF4 448 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 TBX22Q9Y458 520 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 COL22A1Q8NFW1 1626 aaPredicted RBP5.69□□□□□ -1.5
USP46-205ENST00000504078 NEXMIFQ5QGS0 1516 aa5.69□□□□□ -1.5
USP46-205ENST00000504078 LAMC1P11047 1609 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 LOC105371045A0A1W2PR82 267 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 GGCXP38435 758 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 TREML4Q6UXN2 200 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 MTRQ99707 1265 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 MYOM2P54296 1465 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 PLCH1Q4KWH8 1693 aa5.68□□□□□ -1.5
USP46-205ENST00000504078 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 RALGAPBQ86X10 1494 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 DGAT1O75907 488 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 PACS2Q86VP3 889 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 ORAI2Q96SN7 254 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 TMUB1Q9BVT8 246 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 ABCA3Q99758 1704 aa5.67□□□□□ -1.5
USP46-205ENST00000504078 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.67□□□□□ -1.5
USP46-205ENST00000504078 USP32Q8NFA0 1604 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms