RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 BMP2P12643 396 aa9.59□□□□□ -0.87
SUB1-204ENST00000504016 ZBTB33Q86T24 672 aa9.59□□□□□ -0.87
SUB1-204ENST00000504016 H3BM21 787 aa9.58□□□□□ -0.88
SUB1-204ENST00000504016 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
SUB1-204ENST00000504016 MEIOBQ8N635 442 aa9.58□□□□□ -0.88
SUB1-204ENST00000504016 STK17AQ9UEE5 414 aa9.58□□□□□ -0.88
SUB1-204ENST00000504016 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
SUB1-204ENST00000504016 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
SUB1-204ENST00000504016 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
SUB1-204ENST00000504016 GMPRP36959 345 aa9.56□□□□□ -0.88
SUB1-204ENST00000504016 PTK2Q05397 1052 aa9.56□□□□□ -0.88
SUB1-204ENST00000504016 TPRNQ4KMQ1 711 aa9.55□□□□□ -0.88
SUB1-204ENST00000504016 PPP1R26Q5T8A7 1209 aaPredicted RBP9.55□□□□□ -0.88
SUB1-204ENST00000504016 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
SUB1-204ENST00000504016 KCTD15Q96SI1 283 aaPredicted RBP9.55□□□□□ -0.88
SUB1-204ENST00000504016 TSEN34Q9BSV6 310 aaKnown RBP9.55□□□□□ -0.88
SUB1-204ENST00000504016 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
SUB1-204ENST00000504016 CDV3Q9UKY7 258 aaKnown RBP9.55□□□□□ -0.88
SUB1-204ENST00000504016 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
SUB1-204ENST00000504016 EPS8L1Q8TE68 723 aa9.53□□□□□ -0.88
SUB1-204ENST00000504016 ERBB4Q15303 1308 aa9.53□□□□□ -0.88
SUB1-204ENST00000504016 RFC5P40937 340 aa9.52□□□□□ -0.89
SUB1-204ENST00000504016 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
SUB1-204ENST00000504016 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.89
SUB1-204ENST00000504016 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
SUB1-204ENST00000504016 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
SUB1-204ENST00000504016 NEUROD2Q15784 382 aa9.51□□□□□ -0.89
SUB1-204ENST00000504016 ADAM32Q8TC27 787 aa9.51□□□□□ -0.89
SUB1-204ENST00000504016 HMX1Q9NP08 348 aaPredicted RBP9.51□□□□□ -0.89
SUB1-204ENST00000504016 CBLBQ13191 982 aa9.5□□□□□ -0.89
SUB1-204ENST00000504016 OCSTAMPQ9BR26 566 aa9.5□□□□□ -0.89
SUB1-204ENST00000504016 Q6ZVU0 165 aa9.49□□□□□ -0.89
SUB1-204ENST00000504016 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
SUB1-204ENST00000504016 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
SUB1-204ENST00000504016 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
SUB1-204ENST00000504016 FAM181BA6NEQ2 426 aa9.48□□□□□ -0.89
SUB1-204ENST00000504016 TTLL8A6PVC2 850 aa9.48□□□□□ -0.89
SUB1-204ENST00000504016 INTS6LQ5JSJ4 861 aaKnown RBP9.48□□□□□ -0.89
SUB1-204ENST00000504016 ZSCAN1Q8NBB4 408 aa9.48□□□□□ -0.89
SUB1-204ENST00000504016 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
SUB1-204ENST00000504016 NBPF20Q3BBV1 942 aa9.47□□□□□ -0.89
SUB1-204ENST00000504016 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
SUB1-204ENST00000504016 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
SUB1-204ENST00000504016 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
SUB1-204ENST00000504016 RAB15P59190 212 aa9.46□□□□□ -0.9
SUB1-204ENST00000504016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.46□□□□□ -0.9
SUB1-204ENST00000504016 SPINT1O43278 529 aa9.44□□□□□ -0.9
SUB1-204ENST00000504016 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
SUB1-204ENST00000504016 RELBQ01201 579 aa9.44□□□□□ -0.9
SUB1-204ENST00000504016 AGBL1Q96MI9 1066 aa9.44□□□□□ -0.9
SUB1-204ENST00000504016 TMPRSS4Q9NRS4 437 aa9.44□□□□□ -0.9
SUB1-204ENST00000504016 LORP23490 312 aaPredicted RBP9.42□□□□□ -0.9
SUB1-204ENST00000504016 PTSQ03393 145 aa9.42□□□□□ -0.9
SUB1-204ENST00000504016 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
SUB1-204ENST00000504016 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
SUB1-204ENST00000504016 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
SUB1-204ENST00000504016 INSM2Q96T92 566 aaPredicted RBP9.4□□□□□ -0.9
SUB1-204ENST00000504016 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
SUB1-204ENST00000504016 CTSOP43234 321 aaPredicted RBP9.39□□□□□ -0.91
SUB1-204ENST00000504016 POLMQ9NP87 494 aaPredicted RBP9.39□□□□□ -0.91
SUB1-204ENST00000504016 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
SUB1-204ENST00000504016 ESPNB1AK53 854 aa9.38□□□□□ -0.91
SUB1-204ENST00000504016 BRPF1P55201 1214 aaPredicted RBP9.38□□□□□ -0.91
SUB1-204ENST00000504016 ADH1AP07327 375 aa9.37□□□□□ -0.91
SUB1-204ENST00000504016 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
SUB1-204ENST00000504016 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
SUB1-204ENST00000504016 LILRA1O75019 489 aa9.36□□□□□ -0.91
SUB1-204ENST00000504016 SEPT12Q8IYM1 358 aa9.36□□□□□ -0.91
SUB1-204ENST00000504016 CCDC155Q8N6L0 562 aa9.36□□□□□ -0.91
SUB1-204ENST00000504016 TRIM52Q96A61 297 aa9.36□□□□□ -0.91
SUB1-204ENST00000504016 GJD4Q96KN9 370 aaPredicted RBP9.36□□□□□ -0.91
SUB1-204ENST00000504016 PTGIRP43119 386 aa9.35□□□□□ -0.91
SUB1-204ENST00000504016 FBXO45P0C2W1 286 aa9.34□□□□□ -0.91
SUB1-204ENST00000504016 GPR161Q8N6U8 529 aaKnown RBP9.34□□□□□ -0.91
SUB1-204ENST00000504016 RNF217Q8TC41 542 aa9.34□□□□□ -0.91
SUB1-204ENST00000504016 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
SUB1-204ENST00000504016 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
SUB1-204ENST00000504016 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
SUB1-204ENST00000504016 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
SUB1-204ENST00000504016 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
SUB1-204ENST00000504016 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
SUB1-204ENST00000504016 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
SUB1-204ENST00000504016 ITGA6P23229 1130 aa9.31□□□□□ -0.92
SUB1-204ENST00000504016 KDF1Q8NAX2 398 aaPredicted RBP9.31□□□□□ -0.92
SUB1-204ENST00000504016 CDC14CA4D256 554 aa9.3□□□□□ -0.92
SUB1-204ENST00000504016 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
SUB1-204ENST00000504016 VWA5B2Q8N398 1253 aa9.3□□□□□ -0.92
SUB1-204ENST00000504016 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SUB1-204ENST00000504016 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 KRT76Q01546 638 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 NR1H3Q13133 447 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 LYSMD3Q7Z3D4 306 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 CCDC125Q86Z20 511 aa9.29□□□□□ -0.92
SUB1-204ENST00000504016 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
SUB1-204ENST00000504016 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
SUB1-204ENST00000504016 ZNF592Q92610 1267 aa9.28□□□□□ -0.92
SUB1-204ENST00000504016 APBB1O00213 710 aa9.27□□□□□ -0.93
SUB1-204ENST00000504016 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms