RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 FBLN1P23142 703 aa15.18■□□□□ 0.02
VCAN-205ENST00000503923 EVA1CP58658 441 aa15.18■□□□□ 0.02
VCAN-205ENST00000503923 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
VCAN-205ENST00000503923 RRS1Q15050 365 aaKnown RBP15.18■□□□□ 0.02
VCAN-205ENST00000503923 VPS72Q15906 364 aa15.18■□□□□ 0.02
VCAN-205ENST00000503923 CC2D1BQ5T0F9 858 aaKnown RBP15.18■□□□□ 0.02
VCAN-205ENST00000503923 COL5A2P05997 1499 aaPredicted RBP15.17■□□□□ 0.02
VCAN-205ENST00000503923 RTL1A6NKG5 1358 aa15.17■□□□□ 0.02
VCAN-205ENST00000503923 AMPHP49418 695 aa15.17■□□□□ 0.02
VCAN-205ENST00000503923 IP6K1Q92551 441 aa15.17■□□□□ 0.02
VCAN-205ENST00000503923 STRN4Q9NRL3 753 aa15.17■□□□□ 0.02
VCAN-205ENST00000503923 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
VCAN-205ENST00000503923 KIF24Q5T7B8 1368 aa15.16■□□□□ 0.02
VCAN-205ENST00000503923 RXRBP28702 533 aa15.16■□□□□ 0.02
VCAN-205ENST00000503923 TNNT2P45379 298 aaPredicted RBP15.16■□□□□ 0.02
VCAN-205ENST00000503923 RBM6P78332 1123 aaKnown RBP15.16■□□□□ 0.02
VCAN-205ENST00000503923 CCDC9Q9Y3X0 531 aaKnown RBP15.16■□□□□ 0.02
VCAN-205ENST00000503923 BLMP54132 1417 aaPredicted RBP15.16■□□□□ 0.02
VCAN-205ENST00000503923 RGPD5Q99666 1765 aa15.16■□□□□ 0.02
VCAN-205ENST00000503923 MAP2P11137 1827 aaKnown RBP15.15■□□□□ 0.02
VCAN-205ENST00000503923 HOXC9P31274 260 aa15.15■□□□□ 0.02
VCAN-205ENST00000503923 GJD4Q96KN9 370 aaPredicted RBP15.15■□□□□ 0.02
VCAN-205ENST00000503923 EMILIN1Q9Y6C2 1016 aa15.14■□□□□ 0.01
VCAN-205ENST00000503923 FLT4P35916 1363 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
VCAN-205ENST00000503923 LARP1Q6PKG0 1096 aaKnown RBP15.13■□□□□ 0.01
VCAN-205ENST00000503923 POLKQ9UBT6 870 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 ERBB3P21860 1342 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 SPATA31A5Q5VU36 1347 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 SPATA31A7Q8IWB4 1347 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 WDR17Q8IZU2 1322 aa15.13■□□□□ 0.01
VCAN-205ENST00000503923 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
VCAN-205ENST00000503923 GLI3P10071 1580 aa15.12■□□□□ 0.01
VCAN-205ENST00000503923 CRB1P82279 1406 aa15.12■□□□□ 0.01
VCAN-205ENST00000503923 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
VCAN-205ENST00000503923 ANKRD24Q8TF21 1146 aa15.12■□□□□ 0.01
VCAN-205ENST00000503923 SPATA31A1Q5TZJ5 1347 aa15.12■□□□□ 0.01
VCAN-205ENST00000503923 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
VCAN-205ENST00000503923 TOM1L2Q6ZVM7 507 aa15.11■□□□□ 0.01
VCAN-205ENST00000503923 CDK12Q9NYV4 1490 aaPredicted RBP15.11■□□□□ 0.01
VCAN-205ENST00000503923 INSRP06213 1382 aa15.11■□□□□ 0.01
VCAN-205ENST00000503923 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
VCAN-205ENST00000503923 LTV1Q96GA3 475 aaPredicted RBP15.1■□□□□ 0.01
VCAN-205ENST00000503923 TCP11L2Q8N4U5 519 aa15.09■□□□□ 0.01
VCAN-205ENST00000503923 CARD10Q9BWT7 1032 aa15.09■□□□□ 0.01
VCAN-205ENST00000503923 USP35Q9P2H5 1018 aa15.09■□□□□ 0.01
VCAN-205ENST00000503923 THRAP3Q9Y2W1 955 aaKnown RBP15.09■□□□□ 0.01
VCAN-205ENST00000503923 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
VCAN-205ENST00000503923 NLRP2Q9NX02 1062 aa15.08■□□□□ 0
VCAN-205ENST00000503923 ONECUT3O60422 494 aaPredicted RBP15.07■□□□□ 0
VCAN-205ENST00000503923 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
VCAN-205ENST00000503923 BARGINQ6ZT62 677 aa15.07■□□□□ 0
VCAN-205ENST00000503923 RGS12O14924 1447 aa15.07■□□□□ 0
VCAN-205ENST00000503923 MTHFSP49914 203 aa15.06■□□□□ 0
VCAN-205ENST00000503923 ILDR2Q71H61 639 aa15.06■□□□□ 0
VCAN-205ENST00000503923 PARD3Q8TEW0 1356 aa15.06■□□□□ 0
VCAN-205ENST00000503923 A0A0G2JS52 829 aa15.04■□□□□ -0
VCAN-205ENST00000503923 MYT1Q01538 1121 aa15.04■□□□□ -0
VCAN-205ENST00000503923 RALBP1Q15311 655 aa15.04■□□□□ -0
VCAN-205ENST00000503923 SEPT12Q8IYM1 358 aa15.04■□□□□ -0
VCAN-205ENST00000503923 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
VCAN-205ENST00000503923 PPP2R1AP30153 589 aa15.03■□□□□ -0
VCAN-205ENST00000503923 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
VCAN-205ENST00000503923 CDCA7Q9BWT1 371 aaPredicted RBP15.03■□□□□ -0
VCAN-205ENST00000503923 WNK3Q9BYP7 1800 aa15.03■□□□□ -0
VCAN-205ENST00000503923 RGPD2P0DJD1 1756 aa15.03■□□□□ -0
VCAN-205ENST00000503923 NBPF6Q5VWK0 638 aa15.02■□□□□ -0
VCAN-205ENST00000503923 NBPF4Q96M43 638 aa15.02■□□□□ -0
VCAN-205ENST00000503923 DISP2A7MBM2 1401 aa15□□□□□ -0.01
VCAN-205ENST00000503923 IL2RBP14784 551 aa15□□□□□ -0.01
VCAN-205ENST00000503923 CFAP53Q96M91 514 aa15□□□□□ -0.01
VCAN-205ENST00000503923 EYA1Q99502 592 aa15□□□□□ -0.01
VCAN-205ENST00000503923 PARP4Q9UKK3 1724 aaKnown RBP15□□□□□ -0.01
VCAN-205ENST00000503923 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
VCAN-205ENST00000503923 DIAPH1O60610 1272 aaKnown RBP14.99□□□□□ -0.01
VCAN-205ENST00000503923 IL13P35225 146 aa14.99□□□□□ -0.01
VCAN-205ENST00000503923 USHBP1Q8N6Y0 703 aa14.99□□□□□ -0.01
VCAN-205ENST00000503923 NCAPD2Q15021 1401 aa14.99□□□□□ -0.01
VCAN-205ENST00000503923 DDB1Q16531 1140 aa14.98□□□□□ -0.01
VCAN-205ENST00000503923 KRT27Q7Z3Y8 459 aa14.98□□□□□ -0.01
VCAN-205ENST00000503923 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
VCAN-205ENST00000503923 IGSF1Q8N6C5 1336 aa14.97□□□□□ -0.01
VCAN-205ENST00000503923 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
VCAN-205ENST00000503923 COL3A1P02461 1466 aaPredicted RBP14.97□□□□□ -0.01
VCAN-205ENST00000503923 LRRC37A3O60309 1634 aa14.97□□□□□ -0.01
VCAN-205ENST00000503923 PDE3BQ13370 1112 aa14.97□□□□□ -0.01
VCAN-205ENST00000503923 RAPGEF4Q8WZA2 1011 aa14.97□□□□□ -0.01
VCAN-205ENST00000503923 EXOC5O00471 708 aa14.96□□□□□ -0.01
VCAN-205ENST00000503923 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
VCAN-205ENST00000503923 TNS2Q63HR2 1409 aa14.95□□□□□ -0.02
VCAN-205ENST00000503923 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
VCAN-205ENST00000503923 MEGF6O75095 1541 aa14.95□□□□□ -0.02
VCAN-205ENST00000503923 OVOS2A0A0G2JMS6 1433 aa14.94□□□□□ -0.02
VCAN-205ENST00000503923 ANP32CO43423 234 aa14.94□□□□□ -0.02
VCAN-205ENST00000503923 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
VCAN-205ENST00000503923 SULT6B1Q6IMI4 303 aa14.93□□□□□ -0.02
VCAN-205ENST00000503923 PLEKHG2Q9H7P9 1386 aa14.93□□□□□ -0.02
VCAN-205ENST00000503923 U2SURPO15042 1029 aaKnown RBP14.92□□□□□ -0.02
VCAN-205ENST00000503923 KDRP35968 1356 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms