RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 STK32BQ9NY57 414 aa23.22■■□□□ 1.31
PDLIM7-210ENST00000503827 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
PDLIM7-210ENST00000503827 TOM1L2Q6ZVM7 507 aa23.2■■□□□ 1.3
PDLIM7-210ENST00000503827 AATKQ6ZMQ8 1374 aa23.18■■□□□ 1.3
PDLIM7-210ENST00000503827 BCL9O00512 1426 aa23.17■■□□□ 1.3
PDLIM7-210ENST00000503827 SLC15A2Q16348 729 aa23.17■■□□□ 1.3
PDLIM7-210ENST00000503827 TXNRD1Q16881 649 aa23.17■■□□□ 1.3
PDLIM7-210ENST00000503827 MTFR1LQ9H019 292 aa23.17■■□□□ 1.3
PDLIM7-210ENST00000503827 BRD4O60885 1362 aaPredicted RBP23.16■■□□□ 1.3
PDLIM7-210ENST00000503827 MARCH10Q8NA82 808 aaPredicted RBP23.16■■□□□ 1.3
PDLIM7-210ENST00000503827 CDCA7Q9BWT1 371 aaPredicted RBP23.16■■□□□ 1.3
PDLIM7-210ENST00000503827 PPIP5K1Q6PFW1 1433 aa23.15■■□□□ 1.3
PDLIM7-210ENST00000503827 COL18A1P39060 1754 aa23.14■■□□□ 1.3
PDLIM7-210ENST00000503827 NLRP6P59044 892 aa23.14■■□□□ 1.29
PDLIM7-210ENST00000503827 IFFO2Q5TF58 517 aa23.14■■□□□ 1.29
PDLIM7-210ENST00000503827 SLIT3O75094 1523 aa23.13■■□□□ 1.29
PDLIM7-210ENST00000503827 WDR17Q8IZU2 1322 aa23.12■■□□□ 1.29
PDLIM7-210ENST00000503827 SRPK2P78362 688 aaKnown RBP23.12■■□□□ 1.29
PDLIM7-210ENST00000503827 SGIP1Q9BQI5 828 aa23.12■■□□□ 1.29
PDLIM7-210ENST00000503827 ARXQ96QS3 562 aa23.11■■□□□ 1.29
PDLIM7-210ENST00000503827 RGPD5Q99666 1765 aa23.11■■□□□ 1.29
PDLIM7-210ENST00000503827 KIAA1210Q9ULL0 1709 aa23.1■■□□□ 1.29
PDLIM7-210ENST00000503827 UTRNP46939 3433 aa23.09■■□□□ 1.29
PDLIM7-210ENST00000503827 AXIN2Q9Y2T1 843 aa23.08■■□□□ 1.29
PDLIM7-210ENST00000503827 RAB3GAP2Q9H2M9 1393 aa23.08■■□□□ 1.29
PDLIM7-210ENST00000503827 MAP3K5Q99683 1374 aa23.07■■□□□ 1.28
PDLIM7-210ENST00000503827 EXOC5O00471 708 aa23.07■■□□□ 1.28
PDLIM7-210ENST00000503827 USP6P35125 1406 aa23.07■■□□□ 1.28
PDLIM7-210ENST00000503827 CARD10Q9BWT7 1032 aa23.06■■□□□ 1.28
PDLIM7-210ENST00000503827 CABP2Q9NPB3 220 aa23.06■■□□□ 1.28
PDLIM7-210ENST00000503827 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 CSB-PGBD3P0DP91 1061 aa23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 GPR162Q16538 588 aa23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 PIK3C2AO00443 1686 aa23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 NHSQ6T4R5 1651 aa23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 CPSF1Q10570 1443 aaKnown RBP23.05■■□□□ 1.28
PDLIM7-210ENST00000503827 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
PDLIM7-210ENST00000503827 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
PDLIM7-210ENST00000503827 PAPPAQ13219 1627 aa23.01■■□□□ 1.27
PDLIM7-210ENST00000503827 KCNH5Q8NCM2 988 aa23.01■■□□□ 1.27
PDLIM7-210ENST00000503827 CENPJQ9HC77 1338 aaPredicted RBP23.01■■□□□ 1.27
PDLIM7-210ENST00000503827 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
PDLIM7-210ENST00000503827 CCDC7Q96M83 1385 aa23■■□□□ 1.27
PDLIM7-210ENST00000503827 TNS2Q63HR2 1409 aa22.99■■□□□ 1.27
PDLIM7-210ENST00000503827 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
PDLIM7-210ENST00000503827 TRPM1Q7Z4N2 1603 aa22.99■■□□□ 1.27
PDLIM7-210ENST00000503827 BTAF1O14981 1849 aa22.98■■□□□ 1.27
PDLIM7-210ENST00000503827 NBPF1Q3BBV0 1214 aa22.97■■□□□ 1.27
PDLIM7-210ENST00000503827 ACSBG1Q96GR2 724 aa22.97■■□□□ 1.27
PDLIM7-210ENST00000503827 SOX12O15370 315 aa22.96■■□□□ 1.27
PDLIM7-210ENST00000503827 KLHL34Q8N239 644 aa22.96■■□□□ 1.27
PDLIM7-210ENST00000503827 QSER1Q2KHR3 1735 aa22.95■■□□□ 1.26
PDLIM7-210ENST00000503827 PELP1Q8IZL8 1130 aaKnown RBP22.95■■□□□ 1.26
PDLIM7-210ENST00000503827 ABCC6O95255 1503 aa22.94■■□□□ 1.26
PDLIM7-210ENST00000503827 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
PDLIM7-210ENST00000503827 POLD1P28340 1107 aa22.93■■□□□ 1.26
PDLIM7-210ENST00000503827 ZNF827Q17R98 1081 aa22.93■■□□□ 1.26
PDLIM7-210ENST00000503827 COL24A1Q17RW2 1714 aa22.92■■□□□ 1.26
PDLIM7-210ENST00000503827 SHANK3Q9BYB0 1731 aa22.92■■□□□ 1.26
PDLIM7-210ENST00000503827 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
PDLIM7-210ENST00000503827 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
PDLIM7-210ENST00000503827 TTC21AQ8NDW8 1320 aa22.89■■□□□ 1.26
PDLIM7-210ENST00000503827 NFAT5O94916 1531 aa22.89■■□□□ 1.26
PDLIM7-210ENST00000503827 LRRC4BQ9NT99 713 aa22.88■■□□□ 1.25
PDLIM7-210ENST00000503827 EVC2Q86UK5 1308 aa22.87■■□□□ 1.25
PDLIM7-210ENST00000503827 AKT1S1Q96B36 256 aa22.87■■□□□ 1.25
PDLIM7-210ENST00000503827 IL2RBP14784 551 aa22.86■■□□□ 1.25
PDLIM7-210ENST00000503827 NLRP2Q9NX02 1062 aa22.86■■□□□ 1.25
PDLIM7-210ENST00000503827 TUBGCP6Q96RT7 1819 aa22.85■■□□□ 1.25
PDLIM7-210ENST00000503827 SLC27A3Q5K4L6 730 aa22.85■■□□□ 1.25
PDLIM7-210ENST00000503827 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
PDLIM7-210ENST00000503827 NLGN2Q8NFZ4 835 aa22.83■■□□□ 1.25
PDLIM7-210ENST00000503827 LTN1O94822 1766 aa22.83■■□□□ 1.24
PDLIM7-210ENST00000503827 ERBB3P21860 1342 aa22.82■■□□□ 1.24
PDLIM7-210ENST00000503827 PNPLA7Q6ZV29 1317 aa22.82■■□□□ 1.24
PDLIM7-210ENST00000503827 TFCP2L1Q9NZI6 479 aa22.82■■□□□ 1.24
PDLIM7-210ENST00000503827 KTN1Q86UP2 1357 aaKnown RBP22.8■■□□□ 1.24
PDLIM7-210ENST00000503827 CEP350Q5VT06 3117 aa22.8■■□□□ 1.24
PDLIM7-210ENST00000503827 YBX3P16989 372 aaKnown RBP eCLIP22.78■■□□□ 1.24
PDLIM7-210ENST00000503827 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
PDLIM7-210ENST00000503827 USP54Q70EL1 1684 aa22.77■■□□□ 1.24
PDLIM7-210ENST00000503827 ATP10DQ9P241 1426 aa22.76■■□□□ 1.23
PDLIM7-210ENST00000503827 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
PDLIM7-210ENST00000503827 LY75O60449 1722 aa22.76■■□□□ 1.23
PDLIM7-210ENST00000503827 USP31Q70CQ4 1352 aa22.75■■□□□ 1.23
PDLIM7-210ENST00000503827 GOLGB1Q14789 3259 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-210ENST00000503827 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-210ENST00000503827 GPBP1L1Q9HC44 474 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-210ENST00000503827 KCNQ4P56696 695 aa22.73■■□□□ 1.23
PDLIM7-210ENST00000503827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDLIM7-210ENST00000503827 DOT1LQ8TEK3 1739 aa22.72■■□□□ 1.23
PDLIM7-210ENST00000503827 MSH5O43196 834 aa22.72■■□□□ 1.23
PDLIM7-210ENST00000503827 HSPA6P17066 643 aa22.72■■□□□ 1.23
PDLIM7-210ENST00000503827 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
PDLIM7-210ENST00000503827 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-210ENST00000503827 ANKRD36BQ8N2N9 1353 aa22.69■■□□□ 1.22
PDLIM7-210ENST00000503827 PRIM1P49642 420 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-210ENST00000503827 NME9Q86XW9 330 aa22.68■■□□□ 1.22
PDLIM7-210ENST00000503827 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-210ENST00000503827 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms