RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CNKSR2Q8WXI2 1034 aa3.95□□□□□ -1.78
NEDD4-204ENST00000503468 ZBED9Q6R2W3 1325 aa3.95□□□□□ -1.78
NEDD4-204ENST00000503468 UTYO14607 1347 aa3.95□□□□□ -1.78
NEDD4-204ENST00000503468 YTHDC1Q96MU7 727 aaKnown RBP3.95□□□□□ -1.78
NEDD4-204ENST00000503468 PDE3BQ13370 1112 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 PRKRIP1Q9H875 184 aaPredicted RBP3.94□□□□□ -1.78
NEDD4-204ENST00000503468 CLEC17AQ6ZS10 378 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 PRR36Q9H6K5 1346 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 MTX1Q13505 466 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 HOXB7P09629 217 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
NEDD4-204ENST00000503468 LAMA4Q16363 1823 aa3.93□□□□□ -1.78
NEDD4-204ENST00000503468 SENP3Q9H4L4 574 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-204ENST00000503468 KCNN1Q92952 543 aa3.92□□□□□ -1.78
NEDD4-204ENST00000503468 ZNF316A6NFI3 1004 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-204ENST00000503468 IDI1Q13907 227 aa3.92□□□□□ -1.78
NEDD4-204ENST00000503468 AKAP11Q9UKA4 1901 aa3.92□□□□□ -1.78
NEDD4-204ENST00000503468 NEFLP07196 543 aa3.92□□□□□ -1.78
NEDD4-204ENST00000503468 RFX7Q2KHR2 1363 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 AFAP1Q8N556 730 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 KCNB2Q92953 911 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 BCL11BQ9C0K0 894 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-204ENST00000503468 CARMIL3Q8ND23 1372 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 KDM2BQ8NHM5 1336 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 ERBB4Q15303 1308 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 CARD14Q9BXL6 1004 aa3.91□□□□□ -1.78
NEDD4-204ENST00000503468 DDIT3P35638 169 aa3.9□□□□□ -1.78
NEDD4-204ENST00000503468 FBXL16Q8N461 479 aa3.9□□□□□ -1.78
NEDD4-204ENST00000503468 ARHGAP45Q92619 1136 aa3.9□□□□□ -1.78
NEDD4-204ENST00000503468 NID2Q14112 1375 aa3.9□□□□□ -1.78
NEDD4-204ENST00000503468 USP42Q9H9J4 1324 aaKnown RBP3.9□□□□□ -1.78
NEDD4-204ENST00000503468 ECM29Q5VYK3 1845 aa3.9□□□□□ -1.79
NEDD4-204ENST00000503468 COL4A6Q14031 1691 aa3.9□□□□□ -1.79
NEDD4-204ENST00000503468 TEX2Q8IWB9 1127 aa3.89□□□□□ -1.79
NEDD4-204ENST00000503468 HTATSF1O43719 755 aaKnown RBP3.89□□□□□ -1.79
NEDD4-204ENST00000503468 MAST2Q6P0Q8 1798 aa3.89□□□□□ -1.79
NEDD4-204ENST00000503468 ADGRF5Q8IZF2 1346 aa3.89□□□□□ -1.79
NEDD4-204ENST00000503468 KCNA6P17658 529 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 RALBP1Q15311 655 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 IRS2Q9Y4H2 1338 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 NT5C2P49902 561 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 COL1A1P02452 1464 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-204ENST00000503468 NOVP48745 357 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 CGNL1Q0VF96 1302 aa3.88□□□□□ -1.79
NEDD4-204ENST00000503468 KLRG2A4D1S0 409 aaPredicted RBP3.87□□□□□ -1.79
NEDD4-204ENST00000503468 TRIM28Q13263 835 aaKnown RBP3.87□□□□□ -1.79
NEDD4-204ENST00000503468 PFASO15067 1338 aa3.87□□□□□ -1.79
NEDD4-204ENST00000503468 ARFGEF1Q9Y6D6 1849 aa3.87□□□□□ -1.79
NEDD4-204ENST00000503468 GLIPR1L2Q4G1C9 344 aa3.87□□□□□ -1.79
NEDD4-204ENST00000503468 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
NEDD4-204ENST00000503468 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.86□□□□□ -1.79
NEDD4-204ENST00000503468 WDR90Q96KV7 1748 aa3.86□□□□□ -1.79
NEDD4-204ENST00000503468 KIAA1671Q9BY89 1806 aa3.86□□□□□ -1.79
NEDD4-204ENST00000503468 A0A0G2JMZ2 1700 aa3.86□□□□□ -1.79
NEDD4-204ENST00000503468 ABCC12Q96J65 1359 aa3.85□□□□□ -1.79
NEDD4-204ENST00000503468 VGFO15240 615 aaPredicted RBP3.85□□□□□ -1.79
NEDD4-204ENST00000503468 OSBPL3Q9H4L5 887 aa3.85□□□□□ -1.79
NEDD4-204ENST00000503468 PDS5AQ29RF7 1337 aaKnown RBP3.84□□□□□ -1.79
NEDD4-204ENST00000503468 MYH14Q7Z406 1995 aaKnown RBP3.84□□□□□ -1.79
NEDD4-204ENST00000503468 FAM9AQ8IZU1 332 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-204ENST00000503468 KCNA4P22459 653 aa3.84□□□□□ -1.8
NEDD4-204ENST00000503468 FANCIQ9NVI1 1328 aa3.84□□□□□ -1.8
NEDD4-204ENST00000503468 ANKRD31Q8N7Z5 1873 aa3.84□□□□□ -1.8
NEDD4-204ENST00000503468 RPAP1Q9BWH6 1393 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-204ENST00000503468 COL11A2P13942 1736 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-204ENST00000503468 LTKP29376 864 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 RTL5Q5HYW3 569 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-204ENST00000503468 PARP14Q460N5 1801 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 LRRC37A2A6NM11 1700 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 PLEKHG5O94827 1062 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 NLRP13Q86W25 1043 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 ABCC4O15439 1325 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 TTC21BQ7Z4L5 1316 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 NCKAP5LQ9HCH0 1330 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 MYH3P11055 1940 aa3.83□□□□□ -1.8
NEDD4-204ENST00000503468 TSPY4P0CV99 314 aa3.82□□□□□ -1.8
NEDD4-204ENST00000503468 TSPY10P0CW01 314 aa3.82□□□□□ -1.8
NEDD4-204ENST00000503468 KDM4FA0A1W2PPD8 638 aa3.82□□□□□ -1.8
NEDD4-204ENST00000503468 TSHZ2Q9NRE2 1034 aa3.82□□□□□ -1.8
NEDD4-204ENST00000503468 CNGB1Q14028 1251 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-204ENST00000503468 ZNF236Q9UL36 1845 aa3.81□□□□□ -1.8
NEDD4-204ENST00000503468 MYBBP1AQ9BQG0 1328 aaKnown RBP3.81□□□□□ -1.8
NEDD4-204ENST00000503468 TAF1P21675 1872 aa3.81□□□□□ -1.8
NEDD4-204ENST00000503468 MINK1Q8N4C8 1332 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-204ENST00000503468 MEGF6O75095 1541 aa3.81□□□□□ -1.8
NEDD4-204ENST00000503468 DICER1Q9UPY3 1922 aaKnown RBP3.81□□□□□ -1.8
NEDD4-204ENST00000503468 EVCP57679 992 aa3.81□□□□□ -1.8
NEDD4-204ENST00000503468 FLT4P35916 1363 aa3.81□□□□□ -1.8
NEDD4-204ENST00000503468 ADRA2BP18089 450 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 WDR63Q8IWG1 891 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 SUPT16HQ9Y5B9 1047 aaKnown RBP3.8□□□□□ -1.8
NEDD4-204ENST00000503468 CACNA1SQ13698 1873 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 CDK5RAP2Q96SN8 1893 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 BRWD3Q6RI45 1802 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.8□□□□□ -1.8
NEDD4-204ENST00000503468 ZNF692Q9BU19 519 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-204ENST00000503468 RAPGEF3O95398 923 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 RLFQ13129 1914 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 SIPA1L1O43166 1804 aa3.8□□□□□ -1.8
NEDD4-204ENST00000503468 KAT6BQ8WYB5 2073 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms