RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 PEAK1Q9H792 1746 aa7.35□□□□□ -1.23
SCFD2-203ENST00000503450 CRB1P82279 1406 aa7.35□□□□□ -1.23
SCFD2-203ENST00000503450 SOX12O15370 315 aa7.34□□□□□ -1.23
SCFD2-203ENST00000503450 FAM182BQ5T319 152 aa7.34□□□□□ -1.23
SCFD2-203ENST00000503450 BARGINQ6ZT62 677 aa7.34□□□□□ -1.23
SCFD2-203ENST00000503450 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
SCFD2-203ENST00000503450 TNS1Q9HBL0 1735 aaKnown RBP7.34□□□□□ -1.23
SCFD2-203ENST00000503450 PARP4Q9UKK3 1724 aaKnown RBP7.34□□□□□ -1.23
SCFD2-203ENST00000503450 BLMP54132 1417 aaPredicted RBP7.34□□□□□ -1.23
SCFD2-203ENST00000503450 WDR17Q8IZU2 1322 aa7.33□□□□□ -1.24
SCFD2-203ENST00000503450 C11orf95C9JLR9 678 aaPredicted RBP7.33□□□□□ -1.24
SCFD2-203ENST00000503450 HSPA5P11021 654 aaKnown RBP7.33□□□□□ -1.24
SCFD2-203ENST00000503450 FBLN1P23142 703 aa7.33□□□□□ -1.24
SCFD2-203ENST00000503450 TMF1P82094 1093 aa7.33□□□□□ -1.24
SCFD2-203ENST00000503450 HDGFL2Q7Z4V5 671 aaPredicted RBP7.33□□□□□ -1.24
SCFD2-203ENST00000503450 TERF2IPQ9NYB0 399 aa7.33□□□□□ -1.24
SCFD2-203ENST00000503450 LTN1O94822 1766 aa7.33□□□□□ -1.24
SCFD2-203ENST00000503450 ERBB3P21860 1342 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 FYB1O15117 783 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 DEFB132Q7Z7B7 95 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 KCNH5Q8NCM2 988 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 NSD3Q9BZ95 1437 aa7.32□□□□□ -1.24
SCFD2-203ENST00000503450 MAP3K19Q56UN5 1328 aa7.31□□□□□ -1.24
SCFD2-203ENST00000503450 ZBTB7CA1YPR0 619 aa7.31□□□□□ -1.24
SCFD2-203ENST00000503450 CARD10Q9BWT7 1032 aa7.31□□□□□ -1.24
SCFD2-203ENST00000503450 THRAP3Q9Y2W1 955 aaKnown RBP7.31□□□□□ -1.24
SCFD2-203ENST00000503450 FAM208AQ9UK61 1670 aaKnown RBP7.31□□□□□ -1.24
SCFD2-203ENST00000503450 KIF20BQ96Q89 1820 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 SLC24A1O60721 1099 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 EVA1CP58658 441 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 PTF1AQ7RTS3 328 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 GGNBP2Q9H3C7 697 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 RGPD1P0DJD0 1748 aa7.3□□□□□ -1.24
SCFD2-203ENST00000503450 TNS2Q63HR2 1409 aa7.29□□□□□ -1.24
SCFD2-203ENST00000503450 A0A0G2JS52 829 aa7.29□□□□□ -1.24
SCFD2-203ENST00000503450 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCFD2-203ENST00000503450 MYT1Q01538 1121 aa7.29□□□□□ -1.24
SCFD2-203ENST00000503450 ANKRD26Q9UPS8 1709 aa7.29□□□□□ -1.24
SCFD2-203ENST00000503450 BCL9O00512 1426 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 HOXC9P31274 260 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 TOM1L2Q6ZVM7 507 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 CCDC125Q86Z20 511 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 MARCH10Q8NA82 808 aaPredicted RBP7.28□□□□□ -1.24
SCFD2-203ENST00000503450 ANKRD24Q8TF21 1146 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 IP6K1Q92551 441 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 RTL1A6NKG5 1358 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 CCDC7Q96M83 1385 aa7.28□□□□□ -1.24
SCFD2-203ENST00000503450 OVOS2A0A0G2JMS6 1433 aa7.27□□□□□ -1.24
SCFD2-203ENST00000503450 NCAPD2Q15021 1401 aa7.27□□□□□ -1.24
SCFD2-203ENST00000503450 MEGF6O75095 1541 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 SHANK3Q9BYB0 1731 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 RRS1Q15050 365 aaKnown RBP7.27□□□□□ -1.25
SCFD2-203ENST00000503450 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 COG3Q96JB2 828 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 RREB1Q92766 1687 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 RGPD2P0DJD1 1756 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 SBF2Q86WG5 1849 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 KIF7Q2M1P5 1343 aa7.27□□□□□ -1.25
SCFD2-203ENST00000503450 MSH5O43196 834 aa7.26□□□□□ -1.25
SCFD2-203ENST00000503450 TRIM37O94972 964 aa7.26□□□□□ -1.25
SCFD2-203ENST00000503450 EN1Q05925 392 aaPredicted RBP7.26□□□□□ -1.25
SCFD2-203ENST00000503450 FAM196AQ6ZSG2 479 aa7.26□□□□□ -1.25
SCFD2-203ENST00000503450 CAMKK2Q96RR4 588 aa7.26□□□□□ -1.25
SCFD2-203ENST00000503450 SMG6Q86US8 1419 aaKnown RBP7.26□□□□□ -1.25
SCFD2-203ENST00000503450 INSRP06213 1382 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 NUP188Q5SRE5 1749 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 CSB-PGBD3P0DP91 1061 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 PDE3BQ13370 1112 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
SCFD2-203ENST00000503450 DDB1Q16531 1140 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 HSP90AB2PQ58FF8 381 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 EMILIN1Q9Y6C2 1016 aa7.25□□□□□ -1.25
SCFD2-203ENST00000503450 FLT4P35916 1363 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 KIF24Q5T7B8 1368 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 RGPD3A6NKT7 1758 aaPredicted RBP7.24□□□□□ -1.25
SCFD2-203ENST00000503450 RGPD4Q7Z3J3 1758 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NPM3O75607 178 aaKnown RBP7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NBPF6Q5VWK0 638 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 LTV1Q96GA3 475 aaPredicted RBP7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NBPF4Q96M43 638 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 CDCA7Q9BWT1 371 aaPredicted RBP7.24□□□□□ -1.25
SCFD2-203ENST00000503450 PANK3Q9H999 370 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NLRP2Q9NX02 1062 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NHSQ6T4R5 1651 aa7.24□□□□□ -1.25
SCFD2-203ENST00000503450 NSD2O96028 1365 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 IL2RBP14784 551 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 BAG6P46379 1132 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 NCBP3Q53F19 620 aaKnown RBP7.23□□□□□ -1.25
SCFD2-203ENST00000503450 AMER1Q5JTC6 1135 aaPredicted RBP7.23□□□□□ -1.25
SCFD2-203ENST00000503450 PROM2Q8N271 834 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 USHBP1Q8N6Y0 703 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 POLKQ9UBT6 870 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 CGNL1Q0VF96 1302 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 WASHC2AQ641Q2 1341 aa7.23□□□□□ -1.25
SCFD2-203ENST00000503450 PARD3Q8TEW0 1356 aa7.22□□□□□ -1.25
SCFD2-203ENST00000503450 PER1O15534 1290 aaPredicted RBP7.22□□□□□ -1.25
SCFD2-203ENST00000503450 KCNQ2O43526 872 aa7.22□□□□□ -1.25
SCFD2-203ENST00000503450 APBA3O96018 575 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms