RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 PRDM11Q9NQV5 511 aa27.38■■□□□ 1.97
CDC42SE2-206ENST00000503291 INSRP06213 1382 aa27.38■■□□□ 1.97
CDC42SE2-206ENST00000503291 RTL1A6NKG5 1358 aa27.37■■□□□ 1.97
CDC42SE2-206ENST00000503291 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
CDC42SE2-206ENST00000503291 AXIN2Q9Y2T1 843 aa27.36■■□□□ 1.97
CDC42SE2-206ENST00000503291 ADAMTS2O95450 1211 aa27.35■■□□□ 1.97
CDC42SE2-206ENST00000503291 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
CDC42SE2-206ENST00000503291 DIAPH1O60610 1272 aaKnown RBP27.34■■□□□ 1.97
CDC42SE2-206ENST00000503291 PNISRQ8TF01 805 aaKnown RBP27.34■■□□□ 1.97
CDC42SE2-206ENST00000503291 COL3A1P02461 1466 aaPredicted RBP27.34■■□□□ 1.97
CDC42SE2-206ENST00000503291 EIF4A2Q14240 407 aaKnown RBP27.31■■□□□ 1.96
CDC42SE2-206ENST00000503291 COL18A1P39060 1754 aa27.31■■□□□ 1.96
CDC42SE2-206ENST00000503291 IL13P35225 146 aa27.31■■□□□ 1.96
CDC42SE2-206ENST00000503291 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
CDC42SE2-206ENST00000503291 LTV1Q96GA3 475 aaPredicted RBP27.29■■□□□ 1.96
CDC42SE2-206ENST00000503291 NUDCQ9Y266 331 aa27.29■■□□□ 1.96
CDC42SE2-206ENST00000503291 RGPD5Q99666 1765 aa27.28■■□□□ 1.96
CDC42SE2-206ENST00000503291 FAM9BQ8IZU0 186 aa27.28■■□□□ 1.96
CDC42SE2-206ENST00000503291 ABCC6O95255 1503 aa27.27■■□□□ 1.96
CDC42SE2-206ENST00000503291 U2SURPO15042 1029 aaKnown RBP27.26■■□□□ 1.95
CDC42SE2-206ENST00000503291 WDR43Q15061 677 aaKnown RBP eCLIP27.26■■□□□ 1.95
CDC42SE2-206ENST00000503291 CAMTA1Q9Y6Y1 1673 aa27.26■■□□□ 1.95
CDC42SE2-206ENST00000503291 ANKRD24Q8TF21 1146 aa27.26■■□□□ 1.95
CDC42SE2-206ENST00000503291 LRP6O75581 1613 aa27.25■■□□□ 1.95
CDC42SE2-206ENST00000503291 LMO7Q8WWI1 1683 aa27.25■■□□□ 1.95
CDC42SE2-206ENST00000503291 COL14A1Q05707 1796 aaKnown RBP27.24■■□□□ 1.95
CDC42SE2-206ENST00000503291 ERBB3P21860 1342 aa27.24■■□□□ 1.95
CDC42SE2-206ENST00000503291 BTG4Q9NY30 223 aa27.24■■□□□ 1.95
CDC42SE2-206ENST00000503291 ADAMTS8Q9UP79 889 aa27.24■■□□□ 1.95
CDC42SE2-206ENST00000503291 U2AF1L5P0DN76 240 aaPredicted RBP27.23■■□□□ 1.95
CDC42SE2-206ENST00000503291 U2AF1Q01081 240 aaKnown RBP eCLIP27.23■■□□□ 1.95
CDC42SE2-206ENST00000503291 EYA1Q99502 592 aa27.21■■□□□ 1.95
CDC42SE2-206ENST00000503291 C8orf37Q96NL8 207 aa27.21■■□□□ 1.95
CDC42SE2-206ENST00000503291 EVA1CP58658 441 aa27.2■■□□□ 1.94
CDC42SE2-206ENST00000503291 NGLY1Q96IV0 654 aa27.2■■□□□ 1.94
CDC42SE2-206ENST00000503291 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 MEX3CQ5U5Q3 659 aaKnown RBP27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 COL5A2P05997 1499 aaPredicted RBP27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 NBPF6Q5VWK0 638 aa27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 NBPF4Q96M43 638 aa27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 STRN4Q9NRL3 753 aa27.19■■□□□ 1.94
CDC42SE2-206ENST00000503291 IGSF1Q8N6C5 1336 aa27.17■■□□□ 1.94
CDC42SE2-206ENST00000503291 HMOX1P09601 288 aa27.16■■□□□ 1.94
CDC42SE2-206ENST00000503291 WDR17Q8IZU2 1322 aa27.16■■□□□ 1.94
CDC42SE2-206ENST00000503291 SULT6B1Q6IMI4 303 aa27.16■■□□□ 1.94
CDC42SE2-206ENST00000503291 PLCH1Q4KWH8 1693 aa27.16■■□□□ 1.94
CDC42SE2-206ENST00000503291 SLIT2O94813 1529 aa27.15■■□□□ 1.94
CDC42SE2-206ENST00000503291 RGPD1P0DJD0 1748 aa27.15■■□□□ 1.94
CDC42SE2-206ENST00000503291 NLRP2Q9NX02 1062 aa27.15■■□□□ 1.94
CDC42SE2-206ENST00000503291 LARP1Q6PKG0 1096 aaKnown RBP27.14■■□□□ 1.94
CDC42SE2-206ENST00000503291 RGPD2P0DJD1 1756 aa27.14■■□□□ 1.94
CDC42SE2-206ENST00000503291 AEBP1Q8IUX7 1158 aa27.14■■□□□ 1.93
CDC42SE2-206ENST00000503291 FNBP4Q8N3X1 1017 aaPredicted RBP27.14■■□□□ 1.93
CDC42SE2-206ENST00000503291 USHBP1Q8N6Y0 703 aa27.14■■□□□ 1.93
CDC42SE2-206ENST00000503291 TOM1L2Q6ZVM7 507 aa27.13■■□□□ 1.93
CDC42SE2-206ENST00000503291 FCHSD2O94868 740 aa27.12■■□□□ 1.93
CDC42SE2-206ENST00000503291 RSPH6AQ9H0K4 717 aa27.11■■□□□ 1.93
CDC42SE2-206ENST00000503291 NWD2Q9ULI1 1742 aa27.11■■□□□ 1.93
CDC42SE2-206ENST00000503291 KDRP35968 1356 aa27.1■■□□□ 1.93
CDC42SE2-206ENST00000503291 FAM208AQ9UK61 1670 aaKnown RBP27.09■■□□□ 1.93
CDC42SE2-206ENST00000503291 UNC5CLQ8IV45 518 aa27.09■■□□□ 1.93
CDC42SE2-206ENST00000503291 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
CDC42SE2-206ENST00000503291 BCL9LQ86UU0 1499 aa27.09■■□□□ 1.93
CDC42SE2-206ENST00000503291 PRKAR2BP31323 418 aa27.08■■□□□ 1.93
CDC42SE2-206ENST00000503291 CARD10Q9BWT7 1032 aa27.08■■□□□ 1.93
CDC42SE2-206ENST00000503291 USP21Q9UK80 565 aa27.08■■□□□ 1.93
CDC42SE2-206ENST00000503291 NRAPQ86VF7 1730 aa27.08■■□□□ 1.92
CDC42SE2-206ENST00000503291 CRB1P82279 1406 aa27.07■■□□□ 1.92
CDC42SE2-206ENST00000503291 PLEKHF1Q96S99 279 aa27.07■■□□□ 1.92
CDC42SE2-206ENST00000503291 PNNQ9H307 717 aaKnown RBP27.07■■□□□ 1.92
CDC42SE2-206ENST00000503291 NCAPD2Q15021 1401 aa27.06■■□□□ 1.92
CDC42SE2-206ENST00000503291 AFF2P51816 1311 aa27.06■■□□□ 1.92
CDC42SE2-206ENST00000503291 ILDR1Q86SU0 546 aaPredicted RBP27.06■■□□□ 1.92
CDC42SE2-206ENST00000503291 RUNDC1Q96C34 613 aa27.06■■□□□ 1.92
CDC42SE2-206ENST00000503291 USP35Q9P2H5 1018 aa27.06■■□□□ 1.92
CDC42SE2-206ENST00000503291 PHACTR3Q96KR7 559 aa27.02■■□□□ 1.92
CDC42SE2-206ENST00000503291 NEFMP07197 916 aa27.01■■□□□ 1.91
CDC42SE2-206ENST00000503291 CCDC9Q9Y3X0 531 aaKnown RBP27.01■■□□□ 1.91
CDC42SE2-206ENST00000503291 VPS72Q15906 364 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 MAPK8IP3Q9UPT6 1336 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 SENP3-EIF4A1A0A087X0R7 540 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 SPATA31A1Q5TZJ5 1347 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 SPATA31A5Q5VU36 1347 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 SPATA31A7Q8IWB4 1347 aa27■■□□□ 1.91
CDC42SE2-206ENST00000503291 APAF1O14727 1248 aa26.99■■□□□ 1.91
CDC42SE2-206ENST00000503291 RAPGEF4Q8WZA2 1011 aa26.99■■□□□ 1.91
CDC42SE2-206ENST00000503291 TCP11L2Q8N4U5 519 aa26.99■■□□□ 1.91
CDC42SE2-206ENST00000503291 YTHDC1Q96MU7 727 aaKnown RBP26.97■■□□□ 1.91
CDC42SE2-206ENST00000503291 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.97■■□□□ 1.91
CDC42SE2-206ENST00000503291 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
CDC42SE2-206ENST00000503291 TATP17735 454 aaPredicted RBP26.95■■□□□ 1.91
CDC42SE2-206ENST00000503291 IL2RBP14784 551 aa26.95■■□□□ 1.9
CDC42SE2-206ENST00000503291 THRAP3Q9Y2W1 955 aaKnown RBP26.95■■□□□ 1.9
CDC42SE2-206ENST00000503291 TRPC5Q9UL62 973 aaPredicted RBP26.94■■□□□ 1.9
CDC42SE2-206ENST00000503291 MEGF6O75095 1541 aa26.94■■□□□ 1.9
CDC42SE2-206ENST00000503291 MTHFSDQ2M296 383 aaKnown RBP26.93■■□□□ 1.9
CDC42SE2-206ENST00000503291 RRP7AQ9Y3A4 280 aaKnown RBP26.93■■□□□ 1.9
CDC42SE2-206ENST00000503291 TMPOP42166 694 aaKnown RBP26.92■■□□□ 1.9
CDC42SE2-206ENST00000503291 NEUROD2Q15784 382 aa26.92■■□□□ 1.9
CDC42SE2-206ENST00000503291 QTRT2Q9H974 415 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms