RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 RASSF7Q02833 373 aa9.59□□□□□ -0.87
PROM1-203ENST00000502943 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
PROM1-203ENST00000502943 COL25A1Q9BXS0 654 aaPredicted RBP9.59□□□□□ -0.87
PROM1-203ENST00000502943 ADAMTS8Q9UP79 889 aa9.59□□□□□ -0.87
PROM1-203ENST00000502943 GDF11O95390 407 aa9.58□□□□□ -0.88
PROM1-203ENST00000502943 ERFEQ4G0M1 354 aa9.58□□□□□ -0.88
PROM1-203ENST00000502943 RNFT1Q5M7Z0 435 aa9.58□□□□□ -0.88
PROM1-203ENST00000502943 PPP1R26Q5T8A7 1209 aaPredicted RBP9.57□□□□□ -0.88
PROM1-203ENST00000502943 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
PROM1-203ENST00000502943 TUSC1Q2TAM9 212 aa9.56□□□□□ -0.88
PROM1-203ENST00000502943 ZNF385CQ66K41 422 aaPredicted RBP9.56□□□□□ -0.88
PROM1-203ENST00000502943 CCDC155Q8N6L0 562 aa9.56□□□□□ -0.88
PROM1-203ENST00000502943 AK7Q96M32 723 aa9.56□□□□□ -0.88
PROM1-203ENST00000502943 Q6ZVU0 165 aa9.55□□□□□ -0.88
PROM1-203ENST00000502943 SPINT1O43278 529 aa9.54□□□□□ -0.88
PROM1-203ENST00000502943 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
PROM1-203ENST00000502943 NANOS1Q8WY41 292 aaKnown RBP9.54□□□□□ -0.88
PROM1-203ENST00000502943 PGPEP1Q9NXJ5 209 aa9.54□□□□□ -0.88
PROM1-203ENST00000502943 RNF225M0QZC1 329 aaPredicted RBP9.53□□□□□ -0.88
PROM1-203ENST00000502943 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
PROM1-203ENST00000502943 SLC35F4A4IF30 521 aa9.52□□□□□ -0.89
PROM1-203ENST00000502943 GPKOWQ92917 476 aaPredicted RBP eCLIP9.52□□□□□ -0.89
PROM1-203ENST00000502943 AGBL1Q96MI9 1066 aa9.52□□□□□ -0.89
PROM1-203ENST00000502943 CTSOP43234 321 aaPredicted RBP9.51□□□□□ -0.89
PROM1-203ENST00000502943 CLK2P49760 499 aaKnown RBP9.51□□□□□ -0.89
PROM1-203ENST00000502943 PDE4DQ08499 809 aa9.51□□□□□ -0.89
PROM1-203ENST00000502943 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
PROM1-203ENST00000502943 CDC14CA4D256 554 aa9.5□□□□□ -0.89
PROM1-203ENST00000502943 ITGA6P23229 1130 aa9.5□□□□□ -0.89
PROM1-203ENST00000502943 KCTD15Q96SI1 283 aaPredicted RBP9.5□□□□□ -0.89
PROM1-203ENST00000502943 ARHGAP9Q9BRR9 750 aa9.5□□□□□ -0.89
PROM1-203ENST00000502943 RELBQ01201 579 aa9.49□□□□□ -0.89
PROM1-203ENST00000502943 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
PROM1-203ENST00000502943 SLC10A4Q96EP9 437 aa9.49□□□□□ -0.89
PROM1-203ENST00000502943 INSM2Q96T92 566 aaPredicted RBP9.49□□□□□ -0.89
PROM1-203ENST00000502943 SLURP2P0DP57 97 aa9.48□□□□□ -0.89
PROM1-203ENST00000502943 IRS1P35568 1242 aa9.48□□□□□ -0.89
PROM1-203ENST00000502943 POLR3EQ9NVU0 708 aa9.48□□□□□ -0.89
PROM1-203ENST00000502943 ARHGEF15O94989 841 aa9.47□□□□□ -0.89
PROM1-203ENST00000502943 INTS6LQ5JSJ4 861 aaKnown RBP9.47□□□□□ -0.89
PROM1-203ENST00000502943 PDXDC2PQ6P474 469 aa9.47□□□□□ -0.89
PROM1-203ENST00000502943 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
PROM1-203ENST00000502943 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
PROM1-203ENST00000502943 POLMQ9NP87 494 aaPredicted RBP9.46□□□□□ -0.9
PROM1-203ENST00000502943 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
PROM1-203ENST00000502943 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
PROM1-203ENST00000502943 GPAT2Q6NUI2 795 aa9.45□□□□□ -0.9
PROM1-203ENST00000502943 ZBTB33Q86T24 672 aa9.45□□□□□ -0.9
PROM1-203ENST00000502943 RNF217Q8TC41 542 aa9.45□□□□□ -0.9
PROM1-203ENST00000502943 ZNF395Q9H8N7 513 aaPredicted RBP9.45□□□□□ -0.9
PROM1-203ENST00000502943 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
PROM1-203ENST00000502943 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
PROM1-203ENST00000502943 CDV3Q9UKY7 258 aaKnown RBP9.44□□□□□ -0.9
PROM1-203ENST00000502943 NR6A1Q15406 480 aa9.43□□□□□ -0.9
PROM1-203ENST00000502943 TMPRSS4Q9NRS4 437 aa9.43□□□□□ -0.9
PROM1-203ENST00000502943 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
PROM1-203ENST00000502943 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
PROM1-203ENST00000502943 FBXO31Q5XUX0 539 aaPredicted RBP9.42□□□□□ -0.9
PROM1-203ENST00000502943 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
PROM1-203ENST00000502943 RAB15P59190 212 aa9.41□□□□□ -0.9
PROM1-203ENST00000502943 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
PROM1-203ENST00000502943 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
PROM1-203ENST00000502943 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
PROM1-203ENST00000502943 RSPH6AQ9H0K4 717 aa9.4□□□□□ -0.9
PROM1-203ENST00000502943 SLC24A3Q9HC58 644 aa9.4□□□□□ -0.9
PROM1-203ENST00000502943 CUEDC1Q9NWM3 386 aaPredicted RBP9.4□□□□□ -0.9
PROM1-203ENST00000502943 ADAM32Q8TC27 787 aa9.39□□□□□ -0.91
PROM1-203ENST00000502943 ZC3H4Q9UPT8 1303 aaKnown RBP9.38□□□□□ -0.91
PROM1-203ENST00000502943 ADH1AP07327 375 aa9.38□□□□□ -0.91
PROM1-203ENST00000502943 PTK2Q05397 1052 aa9.38□□□□□ -0.91
PROM1-203ENST00000502943 GAS6Q14393 721 aa9.38□□□□□ -0.91
PROM1-203ENST00000502943 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
PROM1-203ENST00000502943 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
PROM1-203ENST00000502943 KDF1Q8NAX2 398 aaPredicted RBP9.37□□□□□ -0.91
PROM1-203ENST00000502943 LILRA1O75019 489 aa9.36□□□□□ -0.91
PROM1-203ENST00000502943 SCARF2Q96GP6 870 aaPredicted RBP9.36□□□□□ -0.91
PROM1-203ENST00000502943 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
PROM1-203ENST00000502943 IGHA1P01876 353 aa9.35□□□□□ -0.91
PROM1-203ENST00000502943 CELA2BP08218 269 aaPredicted RBP9.35□□□□□ -0.91
PROM1-203ENST00000502943 PTGIRP43119 386 aa9.35□□□□□ -0.91
PROM1-203ENST00000502943 SRSF11Q05519 484 aaKnown RBP9.35□□□□□ -0.91
PROM1-203ENST00000502943 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
PROM1-203ENST00000502943 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
PROM1-203ENST00000502943 MAP3K10Q02779 954 aa9.34□□□□□ -0.91
PROM1-203ENST00000502943 GPSM3Q9Y4H4 160 aa9.34□□□□□ -0.91
PROM1-203ENST00000502943 LYSMD3Q7Z3D4 306 aa9.33□□□□□ -0.92
PROM1-203ENST00000502943 PROCA1Q8NCQ7 364 aaPredicted RBP9.33□□□□□ -0.92
PROM1-203ENST00000502943 AP1G2O75843 785 aa9.32□□□□□ -0.92
PROM1-203ENST00000502943 RHOQP17081 205 aa9.32□□□□□ -0.92
PROM1-203ENST00000502943 FOXK2Q01167 660 aa9.32□□□□□ -0.92
PROM1-203ENST00000502943 PRICKLE2Q7Z3G6 844 aa9.32□□□□□ -0.92
PROM1-203ENST00000502943 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
PROM1-203ENST00000502943 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
PROM1-203ENST00000502943 GPR25O00155 361 aa9.3□□□□□ -0.92
PROM1-203ENST00000502943 SKIV2LQ15477 1246 aaKnown RBP9.3□□□□□ -0.92
PROM1-203ENST00000502943 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
PROM1-203ENST00000502943 CYLDQ9NQC7 956 aa9.3□□□□□ -0.92
PROM1-203ENST00000502943 ESPNB1AK53 854 aa9.29□□□□□ -0.92
PROM1-203ENST00000502943 PPP2R2DQ66LE6 453 aa9.29□□□□□ -0.92
PROM1-203ENST00000502943 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms