RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 THSD4Q6ZMP0 1018 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 UNC93B1Q9H1C4 597 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 CHIC2Q9UKJ5 165 aa9.03□□□□□ -0.96
HMGB1P3-201ENST00000502802 ZPR1O75312 459 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 EML3Q32P44 896 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 CCDC24Q8N4L8 307 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 CDCA7Q9BWT1 371 aaPredicted RBP9.02□□□□□ -0.97
HMGB1P3-201ENST00000502802 TLL1O43897 1013 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P3-201ENST00000502802 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
HMGB1P3-201ENST00000502802 TXNDC2Q86VQ3 553 aa9□□□□□ -0.97
HMGB1P3-201ENST00000502802 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
HMGB1P3-201ENST00000502802 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
HMGB1P3-201ENST00000502802 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 CLP1Q92989 425 aaKnown RBP8.99□□□□□ -0.97
HMGB1P3-201ENST00000502802 SSFA2P28290 1259 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 SH3RF1Q7Z6J0 888 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 OGFOD1Q8N543 542 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 MTRQ99707 1265 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 SLC6A16Q9GZN6 736 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 NOD1Q9Y239 953 aa8.98□□□□□ -0.97
HMGB1P3-201ENST00000502802 ARID4AP29374 1257 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 TSGA10IPQ3SY00 556 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 KCTD12Q96CX2 325 aaKnown RBP8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
HMGB1P3-201ENST00000502802 MAGEB6P1A0A0J9YX57 407 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DPYDQ12882 1025 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 SWI5Q1ZZU3 235 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 DOLKQ9UPQ8 538 aa8.96□□□□□ -0.98
HMGB1P3-201ENST00000502802 CLDN10P78369 228 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 BPHLQ86WA6 291 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 BAP1Q92560 729 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 CCDC85AQ96PX6 553 aaPredicted RBP8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 AMOTL2Q9Y2J4 779 aa8.95□□□□□ -0.98
HMGB1P3-201ENST00000502802 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 AGERQ15109 404 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ERFEQ4G0M1 354 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF428Q96B54 188 aa8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF594Q96JF6 807 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P3-201ENST00000502802 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 OXLD1Q5BKU9 147 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 TJAP1Q5JTD0 557 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF516Q92618 1163 aa8.93□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 SIX5Q8N196 739 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 ZNF511Q8NB15 262 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 FOXJ1Q92949 421 aa8.92□□□□□ -0.98
HMGB1P3-201ENST00000502802 DKK1O94907 266 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 GTF2IP78347 998 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 LINC01559Q495D7 138 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 SLC10A4Q96EP9 437 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 KRTAP3-2Q9BYR7 98 aa8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
HMGB1P3-201ENST00000502802 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
HMGB1P3-201ENST00000502802 KIAA1024Q9UPX6 916 aa8.9□□□□□ -0.98
HMGB1P3-201ENST00000502802 POTEMA6NI47 508 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 S1PR4O95977 384 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 PTPN5P54829 565 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 SEC13P55735 322 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 NBPF20Q3BBV1 942 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 CCDC125Q86Z20 511 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 C1orf216Q8TAB5 229 aa8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
HMGB1P3-201ENST00000502802 SOWAHDA6NJG2 315 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 E9PSI1 815 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 USP4Q13107 963 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 C1QTNF2Q9BXJ5 285 aa8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 CDV3Q9UKY7 258 aaKnown RBP8.88□□□□□ -0.99
HMGB1P3-201ENST00000502802 ESPNB1AK53 854 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 SEPT12Q8IYM1 358 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDHB11Q9Y5F2 797 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
HMGB1P3-201ENST00000502802 SERPINB4P48594 390 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 SH3BP2P78314 561 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
HMGB1P3-201ENST00000502802 SFI1A8K8P3 1242 aa8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 PRMT3O60678 531 aa8.85□□□□□ -0.99
HMGB1P3-201ENST00000502802 PSME1Q06323 249 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms