RNA–Protein interactions for RNA: ENST00000502724.5

PRDM2-211, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-211ENST00000502724 RXRBP28702 533 aa13.89□□□□□ -0.19
PRDM2-211ENST00000502724 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
PRDM2-211ENST00000502724 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
PRDM2-211ENST00000502724 CDK12Q9NYV4 1490 aaPredicted RBP13.88□□□□□ -0.19
PRDM2-211ENST00000502724 ZBTB7CA1YPR0 619 aa13.88□□□□□ -0.19
PRDM2-211ENST00000502724 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
PRDM2-211ENST00000502724 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
PRDM2-211ENST00000502724 COL18A1P39060 1754 aa13.88□□□□□ -0.19
PRDM2-211ENST00000502724 AMPHP49418 695 aa13.87□□□□□ -0.19
PRDM2-211ENST00000502724 MORC1Q86VD1 984 aa13.87□□□□□ -0.19
PRDM2-211ENST00000502724 GJD4Q96KN9 370 aaPredicted RBP13.87□□□□□ -0.19
PRDM2-211ENST00000502724 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
PRDM2-211ENST00000502724 FAM208AQ9UK61 1670 aaKnown RBP13.86□□□□□ -0.19
PRDM2-211ENST00000502724 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
PRDM2-211ENST00000502724 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
PRDM2-211ENST00000502724 IP6K1Q92551 441 aa13.86□□□□□ -0.19
PRDM2-211ENST00000502724 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
PRDM2-211ENST00000502724 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
PRDM2-211ENST00000502724 FLT4P35916 1363 aa13.85□□□□□ -0.19
PRDM2-211ENST00000502724 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
PRDM2-211ENST00000502724 STRN4Q9NRL3 753 aa13.85□□□□□ -0.19
PRDM2-211ENST00000502724 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
PRDM2-211ENST00000502724 MAP3K19Q56UN5 1328 aa13.85□□□□□ -0.19
PRDM2-211ENST00000502724 WDR17Q8IZU2 1322 aa13.85□□□□□ -0.19
PRDM2-211ENST00000502724 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
PRDM2-211ENST00000502724 CRB1P82279 1406 aa13.84□□□□□ -0.19
PRDM2-211ENST00000502724 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
PRDM2-211ENST00000502724 CSB-PGBD3P0DP91 1061 aa13.83□□□□□ -0.2
PRDM2-211ENST00000502724 ERBB3P21860 1342 aa13.83□□□□□ -0.2
PRDM2-211ENST00000502724 SPATA31A5Q5VU36 1347 aa13.83□□□□□ -0.2
PRDM2-211ENST00000502724 SPATA31A7Q8IWB4 1347 aa13.83□□□□□ -0.2
PRDM2-211ENST00000502724 RGPD5Q99666 1765 aa13.83□□□□□ -0.2
PRDM2-211ENST00000502724 HOXC9P31274 260 aa13.82□□□□□ -0.2
PRDM2-211ENST00000502724 TOM1L2Q6ZVM7 507 aa13.82□□□□□ -0.2
PRDM2-211ENST00000502724 SPATA31A1Q5TZJ5 1347 aa13.82□□□□□ -0.2
PRDM2-211ENST00000502724 INSRP06213 1382 aa13.82□□□□□ -0.2
PRDM2-211ENST00000502724 GLI3P10071 1580 aa13.81□□□□□ -0.2
PRDM2-211ENST00000502724 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
PRDM2-211ENST00000502724 TCP11L2Q8N4U5 519 aa13.81□□□□□ -0.2
PRDM2-211ENST00000502724 CDCA7Q9BWT1 371 aaPredicted RBP13.81□□□□□ -0.2
PRDM2-211ENST00000502724 AXIN2Q9Y2T1 843 aa13.81□□□□□ -0.2
PRDM2-211ENST00000502724 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
PRDM2-211ENST00000502724 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
PRDM2-211ENST00000502724 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
PRDM2-211ENST00000502724 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
PRDM2-211ENST00000502724 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
PRDM2-211ENST00000502724 CARD10Q9BWT7 1032 aa13.8□□□□□ -0.2
PRDM2-211ENST00000502724 TNNT2P45379 298 aaPredicted RBP13.79□□□□□ -0.2
PRDM2-211ENST00000502724 DDX10Q13206 875 aaKnown RBP13.79□□□□□ -0.2
PRDM2-211ENST00000502724 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
PRDM2-211ENST00000502724 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
PRDM2-211ENST00000502724 EMILIN1Q9Y6C2 1016 aa13.78□□□□□ -0.2
PRDM2-211ENST00000502724 RGS12O14924 1447 aa13.77□□□□□ -0.21
PRDM2-211ENST00000502724 PEAK1Q9H792 1746 aa13.77□□□□□ -0.21
PRDM2-211ENST00000502724 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
PRDM2-211ENST00000502724 A0A0G2JS52 829 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 FBLN1P23142 703 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 MYT1Q01538 1121 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 RALBP1Q15311 655 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
PRDM2-211ENST00000502724 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 WNK3Q9BYP7 1800 aa13.76□□□□□ -0.21
PRDM2-211ENST00000502724 THSD7AQ9UPZ6 1657 aa13.75□□□□□ -0.21
PRDM2-211ENST00000502724 HSP90AB2PQ58FF8 381 aa13.75□□□□□ -0.21
PRDM2-211ENST00000502724 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
PRDM2-211ENST00000502724 LTV1Q96GA3 475 aaPredicted RBP13.75□□□□□ -0.21
PRDM2-211ENST00000502724 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
PRDM2-211ENST00000502724 PLEKHG2Q9H7P9 1386 aa13.74□□□□□ -0.21
PRDM2-211ENST00000502724 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
PRDM2-211ENST00000502724 PARD3Q8TEW0 1356 aa13.73□□□□□ -0.21
PRDM2-211ENST00000502724 IL2RBP14784 551 aa13.73□□□□□ -0.21
PRDM2-211ENST00000502724 MTHFSP49914 203 aa13.73□□□□□ -0.21
PRDM2-211ENST00000502724 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
PRDM2-211ENST00000502724 DDB1Q16531 1140 aa13.71□□□□□ -0.21
PRDM2-211ENST00000502724 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
PRDM2-211ENST00000502724 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
PRDM2-211ENST00000502724 EXOC5O00471 708 aa13.7□□□□□ -0.22
PRDM2-211ENST00000502724 CNGB1Q14028 1251 aaPredicted RBP13.7□□□□□ -0.22
PRDM2-211ENST00000502724 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
PRDM2-211ENST00000502724 DISP2A7MBM2 1401 aa13.7□□□□□ -0.22
PRDM2-211ENST00000502724 RGPD2P0DJD1 1756 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 DIAPH1O60610 1272 aaKnown RBP13.69□□□□□ -0.22
PRDM2-211ENST00000502724 PPP2R1AP30153 589 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 MAPK8IP2Q13387 824 aaPredicted RBP13.69□□□□□ -0.22
PRDM2-211ENST00000502724 EIF4A2Q14240 407 aaKnown RBP13.69□□□□□ -0.22
PRDM2-211ENST00000502724 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 NCAPD2Q15021 1401 aa13.69□□□□□ -0.22
PRDM2-211ENST00000502724 LRRC37A3O60309 1634 aa13.68□□□□□ -0.22
PRDM2-211ENST00000502724 TNS2Q63HR2 1409 aa13.68□□□□□ -0.22
PRDM2-211ENST00000502724 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
PRDM2-211ENST00000502724 IGSF1Q8N6C5 1336 aa13.67□□□□□ -0.22
PRDM2-211ENST00000502724 MYBBP1AQ9BQG0 1328 aaKnown RBP13.67□□□□□ -0.22
PRDM2-211ENST00000502724 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
PRDM2-211ENST00000502724 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
PRDM2-211ENST00000502724 EYA1Q99502 592 aa13.67□□□□□ -0.22
PRDM2-211ENST00000502724 IL13P35225 146 aa13.66□□□□□ -0.22
PRDM2-211ENST00000502724 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
PRDM2-211ENST00000502724 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms