RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 IP6K1Q92551 441 aa17.86■□□□□ 0.45
SGCA-203ENST00000502555 NCBP3Q53F19 620 aaKnown RBP17.85■□□□□ 0.45
SGCA-203ENST00000502555 ABCC6O95255 1503 aa17.84■□□□□ 0.45
SGCA-203ENST00000502555 APAF1O14727 1248 aa17.84■□□□□ 0.45
SGCA-203ENST00000502555 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
SGCA-203ENST00000502555 LTN1O94822 1766 aa17.83■□□□□ 0.45
SGCA-203ENST00000502555 PDE3BQ13370 1112 aa17.83■□□□□ 0.44
SGCA-203ENST00000502555 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.44
SGCA-203ENST00000502555 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
SGCA-203ENST00000502555 CPDO75976 1380 aa17.83■□□□□ 0.44
SGCA-203ENST00000502555 MAPK8IP3Q9UPT6 1336 aa17.82■□□□□ 0.44
SGCA-203ENST00000502555 RGPD1P0DJD0 1748 aa17.82■□□□□ 0.44
SGCA-203ENST00000502555 NEFMP07197 916 aa17.81■□□□□ 0.44
SGCA-203ENST00000502555 TCP11L2Q8N4U5 519 aa17.81■□□□□ 0.44
SGCA-203ENST00000502555 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
SGCA-203ENST00000502555 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
SGCA-203ENST00000502555 PRKAR2BP31323 418 aa17.8■□□□□ 0.44
SGCA-203ENST00000502555 ZNF521Q96K83 1311 aa17.8■□□□□ 0.44
SGCA-203ENST00000502555 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
SGCA-203ENST00000502555 CERKQ8TCT0 537 aa17.79■□□□□ 0.44
SGCA-203ENST00000502555 KDRP35968 1356 aa17.79■□□□□ 0.44
SGCA-203ENST00000502555 PLEKHG5O94827 1062 aa17.78■□□□□ 0.44
SGCA-203ENST00000502555 HMOX1P09601 288 aa17.78■□□□□ 0.44
SGCA-203ENST00000502555 ZC3H6P61129 1189 aaKnown RBP17.78■□□□□ 0.44
SGCA-203ENST00000502555 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
SGCA-203ENST00000502555 CABLES1Q8TDN4 633 aa17.78■□□□□ 0.44
SGCA-203ENST00000502555 SENP3-EIF4A1A0A087X0R7 540 aa17.77■□□□□ 0.44
SGCA-203ENST00000502555 ZBTB7CA1YPR0 619 aa17.77■□□□□ 0.44
SGCA-203ENST00000502555 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.44
SGCA-203ENST00000502555 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
SGCA-203ENST00000502555 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
SGCA-203ENST00000502555 KIAA0232Q92628 1395 aa17.77■□□□□ 0.43
SGCA-203ENST00000502555 EYA1Q99502 592 aa17.76■□□□□ 0.43
SGCA-203ENST00000502555 ABCA3Q99758 1704 aa17.76■□□□□ 0.43
SGCA-203ENST00000502555 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
SGCA-203ENST00000502555 COL22A1Q8NFW1 1626 aaPredicted RBP17.76■□□□□ 0.43
SGCA-203ENST00000502555 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
SGCA-203ENST00000502555 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
SGCA-203ENST00000502555 PIP4K2BP78356 416 aa17.75■□□□□ 0.43
SGCA-203ENST00000502555 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
SGCA-203ENST00000502555 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
SGCA-203ENST00000502555 LTV1Q96GA3 475 aaPredicted RBP17.74■□□□□ 0.43
SGCA-203ENST00000502555 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
SGCA-203ENST00000502555 WWC1Q8IX03 1113 aa17.73■□□□□ 0.43
SGCA-203ENST00000502555 ANKRD24Q8TF21 1146 aa17.73■□□□□ 0.43
SGCA-203ENST00000502555 ERBB3P21860 1342 aa17.73■□□□□ 0.43
SGCA-203ENST00000502555 COL18A1P39060 1754 aa17.73■□□□□ 0.43
SGCA-203ENST00000502555 GOLGA2Q08379 1002 aa17.72■□□□□ 0.43
SGCA-203ENST00000502555 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
SGCA-203ENST00000502555 PRDM11Q9NQV5 511 aa17.72■□□□□ 0.43
SGCA-203ENST00000502555 RRP7AQ9Y3A4 280 aaKnown RBP17.72■□□□□ 0.43
SGCA-203ENST00000502555 PHACTR3Q96KR7 559 aa17.72■□□□□ 0.43
SGCA-203ENST00000502555 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
SGCA-203ENST00000502555 CAMTA1Q9Y6Y1 1673 aa17.71■□□□□ 0.43
SGCA-203ENST00000502555 NEUROD2Q15784 382 aa17.71■□□□□ 0.42
SGCA-203ENST00000502555 WDR63Q8IWG1 891 aa17.71■□□□□ 0.42
SGCA-203ENST00000502555 RIPK4P57078 832 aa17.7■□□□□ 0.42
SGCA-203ENST00000502555 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
SGCA-203ENST00000502555 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
SGCA-203ENST00000502555 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
SGCA-203ENST00000502555 LMO7Q8WWI1 1683 aa17.69■□□□□ 0.42
SGCA-203ENST00000502555 E9PSI1 815 aa17.69■□□□□ 0.42
SGCA-203ENST00000502555 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
SGCA-203ENST00000502555 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
SGCA-203ENST00000502555 SLFN5Q08AF3 891 aa17.68■□□□□ 0.42
SGCA-203ENST00000502555 CDCA7LQ96GN5 454 aa17.68■□□□□ 0.42
SGCA-203ENST00000502555 TRIM35Q9UPQ4 493 aa17.68■□□□□ 0.42
SGCA-203ENST00000502555 PLEKHG2Q9H7P9 1386 aa17.68■□□□□ 0.42
SGCA-203ENST00000502555 IL16Q14005 1332 aa17.67■□□□□ 0.42
SGCA-203ENST00000502555 GAS2L2Q8NHY3 880 aa17.67■□□□□ 0.42
SGCA-203ENST00000502555 CALD1Q05682 793 aaKnown RBP17.66■□□□□ 0.42
SGCA-203ENST00000502555 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
SGCA-203ENST00000502555 COL5A2P05997 1499 aaPredicted RBP17.65■□□□□ 0.42
SGCA-203ENST00000502555 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
SGCA-203ENST00000502555 DUSP27Q5VZP5 1158 aa17.65■□□□□ 0.42
SGCA-203ENST00000502555 USHBP1Q8N6Y0 703 aa17.65■□□□□ 0.42
SGCA-203ENST00000502555 JCADQ9P266 1359 aa17.64■□□□□ 0.41
SGCA-203ENST00000502555 WDR17Q8IZU2 1322 aa17.64■□□□□ 0.41
SGCA-203ENST00000502555 COL14A1Q05707 1796 aaKnown RBP17.63■□□□□ 0.41
SGCA-203ENST00000502555 NLRP2Q9NX02 1062 aa17.63■□□□□ 0.41
SGCA-203ENST00000502555 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
SGCA-203ENST00000502555 FAM83GA6ND36 823 aa17.62■□□□□ 0.41
SGCA-203ENST00000502555 MTHFSDQ2M296 383 aaKnown RBP17.62■□□□□ 0.41
SGCA-203ENST00000502555 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
SGCA-203ENST00000502555 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
SGCA-203ENST00000502555 AMOTQ4VCS5 1084 aa17.61■□□□□ 0.41
SGCA-203ENST00000502555 SPINK5Q9NQ38 1064 aaPredicted RBP17.61■□□□□ 0.41
SGCA-203ENST00000502555 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
SGCA-203ENST00000502555 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
SGCA-203ENST00000502555 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
SGCA-203ENST00000502555 MAP3K5Q99683 1374 aa17.59■□□□□ 0.41
SGCA-203ENST00000502555 CARD10Q9BWT7 1032 aa17.58■□□□□ 0.4
SGCA-203ENST00000502555 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
SGCA-203ENST00000502555 EVA1CP58658 441 aa17.57■□□□□ 0.4
SGCA-203ENST00000502555 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
SGCA-203ENST00000502555 RTF1Q92541 710 aaKnown RBP17.57■□□□□ 0.4
SGCA-203ENST00000502555 IFT57Q9NWB7 429 aa17.57■□□□□ 0.4
SGCA-203ENST00000502555 BTG4Q9NY30 223 aa17.57■□□□□ 0.4
SGCA-203ENST00000502555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.57■□□□□ 0.4
SGCA-203ENST00000502555 CRB1P82279 1406 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms