RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 OVOS2Q6IE36 1432 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 ABCC6O95255 1503 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 PSDA5PKW4 1024 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 DDB1Q16531 1140 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 NCBP3Q53F19 620 aaKnown RBP10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 FAM182BQ5T319 152 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 CARD10Q9BWT7 1032 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 USP35Q9P2H5 1018 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 PARP4Q9UKK3 1724 aaKnown RBP10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 WDR17Q8IZU2 1322 aa10.23□□□□□ -0.77
SH3RF1-202ENST00000502315 SPON1Q9HCB6 807 aa10.22□□□□□ -0.77
SH3RF1-202ENST00000502315 TTC21BQ7Z4L5 1316 aa10.22□□□□□ -0.77
SH3RF1-202ENST00000502315 CPSF1Q10570 1443 aaKnown RBP10.22□□□□□ -0.77
SH3RF1-202ENST00000502315 RGPD3A6NKT7 1758 aaPredicted RBP10.21□□□□□ -0.77
SH3RF1-202ENST00000502315 RGPD4Q7Z3J3 1758 aa10.21□□□□□ -0.77
SH3RF1-202ENST00000502315 POTEHQ6S545 545 aa10.21□□□□□ -0.77
SH3RF1-202ENST00000502315 TOM1L2Q6ZVM7 507 aa10.21□□□□□ -0.77
SH3RF1-202ENST00000502315 ROCK2O75116 1388 aaKnown RBP10.21□□□□□ -0.78
SH3RF1-202ENST00000502315 CCDC7Q96M83 1385 aa10.21□□□□□ -0.78
SH3RF1-202ENST00000502315 TRPM1Q7Z4N2 1603 aa10.21□□□□□ -0.78
SH3RF1-202ENST00000502315 EXOC5O00471 708 aa10.2□□□□□ -0.78
SH3RF1-202ENST00000502315 NPM3O75607 178 aaKnown RBP10.2□□□□□ -0.78
SH3RF1-202ENST00000502315 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
SH3RF1-202ENST00000502315 RREB1Q92766 1687 aa10.2□□□□□ -0.78
SH3RF1-202ENST00000502315 QRICH2Q9H0J4 1663 aa10.2□□□□□ -0.78
SH3RF1-202ENST00000502315 NINLQ9Y2I6 1382 aa10.19□□□□□ -0.78
SH3RF1-202ENST00000502315 KCNQ2O43526 872 aa10.19□□□□□ -0.78
SH3RF1-202ENST00000502315 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
SH3RF1-202ENST00000502315 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
SH3RF1-202ENST00000502315 COL18A1P39060 1754 aa10.18□□□□□ -0.78
SH3RF1-202ENST00000502315 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
SH3RF1-202ENST00000502315 PEAK1Q9H792 1746 aa10.17□□□□□ -0.78
SH3RF1-202ENST00000502315 HDGFL2Q7Z4V5 671 aaPredicted RBP10.16□□□□□ -0.78
SH3RF1-202ENST00000502315 TERF2IPQ9NYB0 399 aa10.16□□□□□ -0.78
SH3RF1-202ENST00000502315 PIK3C2AO00443 1686 aa10.15□□□□□ -0.78
SH3RF1-202ENST00000502315 CSB-PGBD3P0DP91 1061 aa10.15□□□□□ -0.78
SH3RF1-202ENST00000502315 MARCH10Q8NA82 808 aaPredicted RBP10.15□□□□□ -0.78
SH3RF1-202ENST00000502315 AKAP12Q02952 1782 aa10.15□□□□□ -0.78
SH3RF1-202ENST00000502315 NUP188Q5SRE5 1749 aa10.15□□□□□ -0.78
SH3RF1-202ENST00000502315 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-202ENST00000502315 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-202ENST00000502315 USP54Q70EL1 1684 aa10.14□□□□□ -0.79
SH3RF1-202ENST00000502315 EDC4Q6P2E9 1401 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-202ENST00000502315 NFAT5O94916 1531 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 ERBB3P21860 1342 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 PROM2Q8N271 834 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 SIN3AQ96ST3 1273 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 CARD11Q9BXL7 1154 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 SPINK5Q9NQ38 1064 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 LRRC37A3O60309 1634 aa10.13□□□□□ -0.79
SH3RF1-202ENST00000502315 IL2RBP14784 551 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 DSG3P32926 999 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 SLC15A2Q16348 729 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 TXNRD1Q16881 649 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 STK32BQ9NY57 414 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 TNS2Q63HR2 1409 aa10.12□□□□□ -0.79
SH3RF1-202ENST00000502315 ZBTB7CA1YPR0 619 aa10.11□□□□□ -0.79
SH3RF1-202ENST00000502315 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
SH3RF1-202ENST00000502315 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
SH3RF1-202ENST00000502315 IP6K1Q92551 441 aa10.11□□□□□ -0.79
SH3RF1-202ENST00000502315 MTFR1LQ9H019 292 aa10.11□□□□□ -0.79
SH3RF1-202ENST00000502315 MON2Q7Z3U7 1717 aa10.1□□□□□ -0.79
SH3RF1-202ENST00000502315 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
SH3RF1-202ENST00000502315 YY1P25490 414 aa10.1□□□□□ -0.79
SH3RF1-202ENST00000502315 CD163L1Q9NR16 1453 aa10.1□□□□□ -0.79
SH3RF1-202ENST00000502315 CGNL1Q0VF96 1302 aa10.09□□□□□ -0.79
SH3RF1-202ENST00000502315 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
SH3RF1-202ENST00000502315 MAP3K5Q99683 1374 aa10.09□□□□□ -0.79
SH3RF1-202ENST00000502315 PTGER2P43116 358 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 CDCA8Q53HL2 280 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 SLC12A5Q9H2X9 1139 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 TONSLQ96HA7 1378 aa10.08□□□□□ -0.8
SH3RF1-202ENST00000502315 CASZ1Q86V15 1759 aa10.07□□□□□ -0.8
SH3RF1-202ENST00000502315 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
SH3RF1-202ENST00000502315 COG3Q96JB2 828 aa10.07□□□□□ -0.8
SH3RF1-202ENST00000502315 A0A1W2PP64 1363 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 CAPN15O75808 1086 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 NME9Q86XW9 330 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 TESK2Q96S53 571 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 SGIP1Q9BQI5 828 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 TIMELESSQ9UNS1 1208 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 RGPD5Q99666 1765 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 NHSQ6T4R5 1651 aa10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 FAM208AQ9UK61 1670 aaKnown RBP10.06□□□□□ -0.8
SH3RF1-202ENST00000502315 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
SH3RF1-202ENST00000502315 SOX12O15370 315 aa10.05□□□□□ -0.8
SH3RF1-202ENST00000502315 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
SH3RF1-202ENST00000502315 SYT17Q9BSW7 474 aa10.05□□□□□ -0.8
SH3RF1-202ENST00000502315 ANKRD36BQ8N2N9 1353 aa10.04□□□□□ -0.8
SH3RF1-202ENST00000502315 AMPHP49418 695 aa10.03□□□□□ -0.8
SH3RF1-202ENST00000502315 TMF1P82094 1093 aa10.03□□□□□ -0.8
SH3RF1-202ENST00000502315 ZCRB1Q8TBF4 217 aaKnown RBP10.03□□□□□ -0.8
SH3RF1-202ENST00000502315 AKT1S1Q96B36 256 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms