RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 CLSPNQ9HAW4 1339 aa23.83■■□□□ 1.4
CDKN2A-209ENST00000498628 TRIM37O94972 964 aa23.82■■□□□ 1.4
CDKN2A-209ENST00000498628 EN1Q05925 392 aaPredicted RBP23.82■■□□□ 1.4
CDKN2A-209ENST00000498628 TESK2Q96S53 571 aa23.82■■□□□ 1.4
CDKN2A-209ENST00000498628 AXIN2Q9Y2T1 843 aa23.82■■□□□ 1.4
CDKN2A-209ENST00000498628 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
CDKN2A-209ENST00000498628 TMF1P82094 1093 aa23.81■■□□□ 1.4
CDKN2A-209ENST00000498628 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
CDKN2A-209ENST00000498628 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
CDKN2A-209ENST00000498628 DDB1Q16531 1140 aa23.8■■□□□ 1.4
CDKN2A-209ENST00000498628 NME9Q86XW9 330 aa23.8■■□□□ 1.4
CDKN2A-209ENST00000498628 APBA3O96018 575 aa23.79■■□□□ 1.4
CDKN2A-209ENST00000498628 CD163L1Q9NR16 1453 aa23.79■■□□□ 1.4
CDKN2A-209ENST00000498628 DISP2A7MBM2 1401 aa23.78■■□□□ 1.4
CDKN2A-209ENST00000498628 CDCA8Q53HL2 280 aa23.78■■□□□ 1.4
CDKN2A-209ENST00000498628 CARD10Q9BWT7 1032 aa23.78■■□□□ 1.4
CDKN2A-209ENST00000498628 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
CDKN2A-209ENST00000498628 COL18A1P39060 1754 aa23.76■■□□□ 1.39
CDKN2A-209ENST00000498628 PARD3Q8TEW0 1356 aa23.76■■□□□ 1.39
CDKN2A-209ENST00000498628 USP47Q96K76 1375 aa23.76■■□□□ 1.39
CDKN2A-209ENST00000498628 NFAT5O94916 1531 aa23.75■■□□□ 1.39
CDKN2A-209ENST00000498628 ABCC6O95255 1503 aa23.75■■□□□ 1.39
CDKN2A-209ENST00000498628 PARP4Q9UKK3 1724 aaKnown RBP23.74■■□□□ 1.39
CDKN2A-209ENST00000498628 CCDC7Q96M83 1385 aa23.74■■□□□ 1.39
CDKN2A-209ENST00000498628 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
CDKN2A-209ENST00000498628 COG3Q96JB2 828 aa23.73■■□□□ 1.39
CDKN2A-209ENST00000498628 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
CDKN2A-209ENST00000498628 OVOS2A0A0G2JMS6 1433 aa23.72■■□□□ 1.39
CDKN2A-209ENST00000498628 OVOS2A0A0J9YW53 1432 aa23.72■■□□□ 1.39
CDKN2A-209ENST00000498628 OVOS2Q6IE36 1432 aa23.72■■□□□ 1.39
CDKN2A-209ENST00000498628 EXOC5O00471 708 aa23.71■■□□□ 1.39
CDKN2A-209ENST00000498628 USP54Q70EL1 1684 aa23.7■■□□□ 1.39
CDKN2A-209ENST00000498628 TNS1Q9HBL0 1735 aaKnown RBP23.7■■□□□ 1.38
CDKN2A-209ENST00000498628 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
CDKN2A-209ENST00000498628 PSDA5PKW4 1024 aaPredicted RBP23.69■■□□□ 1.38
CDKN2A-209ENST00000498628 NBPF14Q5TI25 921 aa23.69■■□□□ 1.38
CDKN2A-209ENST00000498628 NLRP2Q9NX02 1062 aa23.69■■□□□ 1.38
CDKN2A-209ENST00000498628 ERBB3P21860 1342 aa23.67■■□□□ 1.38
CDKN2A-209ENST00000498628 ANKRD24Q8TF21 1146 aa23.67■■□□□ 1.38
CDKN2A-209ENST00000498628 RGPD5Q99666 1765 aa23.66■■□□□ 1.38
CDKN2A-209ENST00000498628 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
CDKN2A-209ENST00000498628 IP6K1Q92551 441 aa23.65■■□□□ 1.38
CDKN2A-209ENST00000498628 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.37
CDKN2A-209ENST00000498628 BCL11BQ9C0K0 894 aaPredicted RBP23.64■■□□□ 1.37
CDKN2A-209ENST00000498628 LRRC37A3O60309 1634 aa23.63■■□□□ 1.37
CDKN2A-209ENST00000498628 IL2RBP14784 551 aa23.63■■□□□ 1.37
CDKN2A-209ENST00000498628 AMPHP49418 695 aa23.63■■□□□ 1.37
CDKN2A-209ENST00000498628 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
CDKN2A-209ENST00000498628 BCL9O00512 1426 aa23.61■■□□□ 1.37
CDKN2A-209ENST00000498628 LTN1O94822 1766 aa23.61■■□□□ 1.37
CDKN2A-209ENST00000498628 PLSCR1O15162 318 aa23.61■■□□□ 1.37
CDKN2A-209ENST00000498628 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
CDKN2A-209ENST00000498628 FYB1O15117 783 aa23.58■■□□□ 1.37
CDKN2A-209ENST00000498628 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
CDKN2A-209ENST00000498628 PEAK1Q9H792 1746 aa23.58■■□□□ 1.37
CDKN2A-209ENST00000498628 TNS2Q63HR2 1409 aa23.57■■□□□ 1.36
CDKN2A-209ENST00000498628 MAP3K19Q56UN5 1328 aa23.57■■□□□ 1.36
CDKN2A-209ENST00000498628 GGNBP2Q9H3C7 697 aa23.56■■□□□ 1.36
CDKN2A-209ENST00000498628 HOXC9P31274 260 aa23.55■■□□□ 1.36
CDKN2A-209ENST00000498628 LRP5O75197 1615 aa23.53■■□□□ 1.36
CDKN2A-209ENST00000498628 RTL1A6NKG5 1358 aa23.52■■□□□ 1.36
CDKN2A-209ENST00000498628 RREB1Q92766 1687 aa23.52■■□□□ 1.36
CDKN2A-209ENST00000498628 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.36
CDKN2A-209ENST00000498628 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
CDKN2A-209ENST00000498628 FBLN1P23142 703 aa23.5■■□□□ 1.35
CDKN2A-209ENST00000498628 SMG6Q86US8 1419 aaKnown RBP23.5■■□□□ 1.35
CDKN2A-209ENST00000498628 FAM208AQ9UK61 1670 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-209ENST00000498628 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
CDKN2A-209ENST00000498628 POLR3GLQ9BT43 218 aa23.49■■□□□ 1.35
CDKN2A-209ENST00000498628 RGPD3A6NKT7 1758 aaPredicted RBP23.48■■□□□ 1.35
CDKN2A-209ENST00000498628 RGPD4Q7Z3J3 1758 aa23.48■■□□□ 1.35
CDKN2A-209ENST00000498628 PTF1AQ7RTS3 328 aa23.48■■□□□ 1.35
CDKN2A-209ENST00000498628 NUP188Q5SRE5 1749 aa23.47■■□□□ 1.35
CDKN2A-209ENST00000498628 DDX54Q8TDD1 881 aaKnown RBP23.47■■□□□ 1.35
CDKN2A-209ENST00000498628 ACSBG1Q96GR2 724 aa23.47■■□□□ 1.35
CDKN2A-209ENST00000498628 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
CDKN2A-209ENST00000498628 CARD14Q9BXL6 1004 aa23.46■■□□□ 1.35
CDKN2A-209ENST00000498628 NSD3Q9BZ95 1437 aa23.46■■□□□ 1.35
CDKN2A-209ENST00000498628 SRCAPQ6ZRS2 3230 aa23.45■■□□□ 1.34
CDKN2A-209ENST00000498628 CGNL1Q0VF96 1302 aa23.45■■□□□ 1.34
CDKN2A-209ENST00000498628 KCNQ2O43526 872 aa23.45■■□□□ 1.34
CDKN2A-209ENST00000498628 TXNRD1Q16881 649 aa23.45■■□□□ 1.34
CDKN2A-209ENST00000498628 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
CDKN2A-209ENST00000498628 STK32BQ9NY57 414 aa23.44■■□□□ 1.34
CDKN2A-209ENST00000498628 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
CDKN2A-209ENST00000498628 SPON1Q9HCB6 807 aa23.43■■□□□ 1.34
CDKN2A-209ENST00000498628 INSRP06213 1382 aa23.42■■□□□ 1.34
CDKN2A-209ENST00000498628 FLT4P35916 1363 aa23.42■■□□□ 1.34
CDKN2A-209ENST00000498628 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
CDKN2A-209ENST00000498628 PROM2Q8N271 834 aa23.42■■□□□ 1.34
CDKN2A-209ENST00000498628 KIF20BQ96Q89 1820 aa23.42■■□□□ 1.34
CDKN2A-209ENST00000498628 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
CDKN2A-209ENST00000498628 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
CDKN2A-209ENST00000498628 TATP17735 454 aaPredicted RBP23.4■■□□□ 1.34
CDKN2A-209ENST00000498628 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
CDKN2A-209ENST00000498628 NHSQ6T4R5 1651 aa23.39■■□□□ 1.34
CDKN2A-209ENST00000498628 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
CDKN2A-209ENST00000498628 MYOM1P52179 1685 aa23.38■■□□□ 1.33
CDKN2A-209ENST00000498628 PPM1GO15355 546 aaPredicted RBP23.37■■□□□ 1.33
CDKN2A-209ENST00000498628 SLC15A2Q16348 729 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms