RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 DDB1Q16531 1140 aa20.41■□□□□ 0.86
HDLBP-247ENST00000498595 PUS7Q96PZ0 661 aaKnown RBP20.41■□□□□ 0.86
HDLBP-247ENST00000498595 CDCA7Q9BWT1 371 aaPredicted RBP20.41■□□□□ 0.86
HDLBP-247ENST00000498595 AXIN2Q9Y2T1 843 aa20.4■□□□□ 0.86
HDLBP-247ENST00000498595 SLC12A5Q9H2X9 1139 aa20.39■□□□□ 0.85
HDLBP-247ENST00000498595 TNS1Q9HBL0 1735 aaKnown RBP20.39■□□□□ 0.85
HDLBP-247ENST00000498595 OVOS2A0A0G2JMS6 1433 aa20.38■□□□□ 0.85
HDLBP-247ENST00000498595 OVOS2A0A0J9YW53 1432 aa20.38■□□□□ 0.85
HDLBP-247ENST00000498595 OVOS2Q6IE36 1432 aa20.38■□□□□ 0.85
HDLBP-247ENST00000498595 SRCAPQ6ZRS2 3230 aa20.38■□□□□ 0.85
HDLBP-247ENST00000498595 EDC4Q6P2E9 1401 aaKnown RBP20.37■□□□□ 0.85
HDLBP-247ENST00000498595 USP31Q70CQ4 1352 aa20.37■□□□□ 0.85
HDLBP-247ENST00000498595 MON2Q7Z3U7 1717 aa20.37■□□□□ 0.85
HDLBP-247ENST00000498595 PARP4Q9UKK3 1724 aaKnown RBP20.37■□□□□ 0.85
HDLBP-247ENST00000498595 R3HDM1Q15032 1099 aaKnown RBP20.37■□□□□ 0.85
HDLBP-247ENST00000498595 NME9Q86XW9 330 aa20.37■□□□□ 0.85
HDLBP-247ENST00000498595 CAMKK2Q96RR4 588 aa20.37■□□□□ 0.85
HDLBP-247ENST00000498595 CARD10Q9BWT7 1032 aa20.37■□□□□ 0.85
HDLBP-247ENST00000498595 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
HDLBP-247ENST00000498595 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
HDLBP-247ENST00000498595 NFAT5O94916 1531 aa20.36■□□□□ 0.85
HDLBP-247ENST00000498595 NBPF14Q5TI25 921 aa20.35■□□□□ 0.85
HDLBP-247ENST00000498595 ABCC6O95255 1503 aa20.35■□□□□ 0.85
HDLBP-247ENST00000498595 COL18A1P39060 1754 aa20.34■□□□□ 0.85
HDLBP-247ENST00000498595 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
HDLBP-247ENST00000498595 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
HDLBP-247ENST00000498595 CCDC7Q96M83 1385 aa20.34■□□□□ 0.85
HDLBP-247ENST00000498595 EXOC5O00471 708 aa20.31■□□□□ 0.84
HDLBP-247ENST00000498595 TESK2Q96S53 571 aa20.31■□□□□ 0.84
HDLBP-247ENST00000498595 NLRP2Q9NX02 1062 aa20.31■□□□□ 0.84
HDLBP-247ENST00000498595 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
HDLBP-247ENST00000498595 TMF1P82094 1093 aa20.3■□□□□ 0.84
HDLBP-247ENST00000498595 LRP5O75197 1615 aa20.3■□□□□ 0.84
HDLBP-247ENST00000498595 COG3Q96JB2 828 aa20.28■□□□□ 0.84
HDLBP-247ENST00000498595 BCL11BQ9C0K0 894 aaPredicted RBP20.28■□□□□ 0.84
HDLBP-247ENST00000498595 USP47Q96K76 1375 aa20.28■□□□□ 0.84
HDLBP-247ENST00000498595 USP54Q70EL1 1684 aa20.28■□□□□ 0.84
HDLBP-247ENST00000498595 ERBB3P21860 1342 aa20.27■□□□□ 0.84
HDLBP-247ENST00000498595 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
HDLBP-247ENST00000498595 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
HDLBP-247ENST00000498595 ANKRD24Q8TF21 1146 aa20.26■□□□□ 0.83
HDLBP-247ENST00000498595 PLSCR1O15162 318 aa20.25■□□□□ 0.83
HDLBP-247ENST00000498595 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 IL2RBP14784 551 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 TIMELESSQ9UNS1 1208 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 WNK3Q9BYP7 1800 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 BCL9O00512 1426 aa20.24■□□□□ 0.83
HDLBP-247ENST00000498595 ANKRD36BQ8N2N9 1353 aa20.23■□□□□ 0.83
HDLBP-247ENST00000498595 TNS2Q63HR2 1409 aa20.23■□□□□ 0.83
HDLBP-247ENST00000498595 IP6K1Q92551 441 aa20.23■□□□□ 0.83
HDLBP-247ENST00000498595 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
HDLBP-247ENST00000498595 RREB1Q92766 1687 aa20.22■□□□□ 0.83
HDLBP-247ENST00000498595 CLSPNQ9HAW4 1339 aa20.22■□□□□ 0.83
HDLBP-247ENST00000498595 AMPHP49418 695 aa20.21■□□□□ 0.83
HDLBP-247ENST00000498595 LTN1O94822 1766 aa20.21■□□□□ 0.83
HDLBP-247ENST00000498595 NUP188Q5SRE5 1749 aa20.2■□□□□ 0.82
HDLBP-247ENST00000498595 LTV1Q96GA3 475 aaPredicted RBP20.2■□□□□ 0.82
HDLBP-247ENST00000498595 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
HDLBP-247ENST00000498595 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
HDLBP-247ENST00000498595 MAP3K19Q56UN5 1328 aa20.17■□□□□ 0.82
HDLBP-247ENST00000498595 PTF1AQ7RTS3 328 aa20.16■□□□□ 0.82
HDLBP-247ENST00000498595 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
HDLBP-247ENST00000498595 HOXC9P31274 260 aa20.15■□□□□ 0.82
HDLBP-247ENST00000498595 GGNBP2Q9H3C7 697 aa20.15■□□□□ 0.82
HDLBP-247ENST00000498595 SPON1Q9HCB6 807 aa20.15■□□□□ 0.82
HDLBP-247ENST00000498595 SBF2Q86WG5 1849 aa20.15■□□□□ 0.82
HDLBP-247ENST00000498595 ACSBG1Q96GR2 724 aa20.14■□□□□ 0.81
HDLBP-247ENST00000498595 RTL1A6NKG5 1358 aa20.13■□□□□ 0.81
HDLBP-247ENST00000498595 FYB1O15117 783 aa20.13■□□□□ 0.81
HDLBP-247ENST00000498595 TXNRD1Q16881 649 aa20.13■□□□□ 0.81
HDLBP-247ENST00000498595 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
HDLBP-247ENST00000498595 SMG6Q86US8 1419 aaKnown RBP20.12■□□□□ 0.81
HDLBP-247ENST00000498595 KCNQ2O43526 872 aa20.12■□□□□ 0.81
HDLBP-247ENST00000498595 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
HDLBP-247ENST00000498595 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
HDLBP-247ENST00000498595 FBLN1P23142 703 aa20.1■□□□□ 0.81
HDLBP-247ENST00000498595 RRS1Q15050 365 aaKnown RBP20.1■□□□□ 0.81
HDLBP-247ENST00000498595 PROM2Q8N271 834 aa20.1■□□□□ 0.81
HDLBP-247ENST00000498595 ANO8Q9HCE9 1232 aaPredicted RBP20.1■□□□□ 0.81
HDLBP-247ENST00000498595 NHSQ6T4R5 1651 aa20.08■□□□□ 0.81
HDLBP-247ENST00000498595 DCAF8L1A6NGE4 600 aa20.07■□□□□ 0.8
HDLBP-247ENST00000498595 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
HDLBP-247ENST00000498595 POLR3GLQ9BT43 218 aa20.07■□□□□ 0.8
HDLBP-247ENST00000498595 SLC15A2Q16348 729 aa20.06■□□□□ 0.8
HDLBP-247ENST00000498595 ZCRB1Q8TBF4 217 aaKnown RBP20.06■□□□□ 0.8
HDLBP-247ENST00000498595 RAPGEF4Q8WZA2 1011 aa20.06■□□□□ 0.8
HDLBP-247ENST00000498595 NSD3Q9BZ95 1437 aa20.06■□□□□ 0.8
HDLBP-247ENST00000498595 SYTL4Q96C24 671 aaPredicted RBP20.05■□□□□ 0.8
HDLBP-247ENST00000498595 FLT4P35916 1363 aa20.05■□□□□ 0.8
HDLBP-247ENST00000498595 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
HDLBP-247ENST00000498595 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
HDLBP-247ENST00000498595 ZBTB7AO95365 584 aa20.03■□□□□ 0.8
HDLBP-247ENST00000498595 INSRP06213 1382 aa20.03■□□□□ 0.8
HDLBP-247ENST00000498595 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
HDLBP-247ENST00000498595 EIF4G2P78344 907 aaKnown RBP eCLIP20.02■□□□□ 0.8
HDLBP-247ENST00000498595 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
HDLBP-247ENST00000498595 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
HDLBP-247ENST00000498595 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
HDLBP-247ENST00000498595 KIF20BQ96Q89 1820 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms