RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 PDGFDQ9GZP0 370 aaPredicted RBP17.39■□□□□ 0.37
THBS3-209ENST00000498500 BRD4O60885 1362 aaPredicted RBP17.39■□□□□ 0.37
THBS3-209ENST00000498500 TRIM26Q12899 539 aaPredicted RBP17.38■□□□□ 0.37
THBS3-209ENST00000498500 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
THBS3-209ENST00000498500 CHD4Q14839 1912 aa17.38■□□□□ 0.37
THBS3-209ENST00000498500 COL18A1P39060 1754 aa17.38■□□□□ 0.37
THBS3-209ENST00000498500 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
THBS3-209ENST00000498500 PROM2Q8N271 834 aa17.37■□□□□ 0.37
THBS3-209ENST00000498500 SLIT3O75094 1523 aa17.37■□□□□ 0.37
THBS3-209ENST00000498500 QRICH2Q9H0J4 1663 aa17.36■□□□□ 0.37
THBS3-209ENST00000498500 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
THBS3-209ENST00000498500 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
THBS3-209ENST00000498500 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
THBS3-209ENST00000498500 CABP1Q9NZU7 370 aa17.36■□□□□ 0.37
THBS3-209ENST00000498500 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
THBS3-209ENST00000498500 USP6P35125 1406 aa17.36■□□□□ 0.37
THBS3-209ENST00000498500 WDR17Q8IZU2 1322 aa17.35■□□□□ 0.37
THBS3-209ENST00000498500 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
THBS3-209ENST00000498500 PTGER2P43116 358 aa17.34■□□□□ 0.37
THBS3-209ENST00000498500 TXNRD1Q16881 649 aa17.34■□□□□ 0.37
THBS3-209ENST00000498500 ZNF784Q8NCA9 323 aaPredicted RBP17.34■□□□□ 0.37
THBS3-209ENST00000498500 KAT6BQ8WYB5 2073 aa17.34■□□□□ 0.37
THBS3-209ENST00000498500 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
THBS3-209ENST00000498500 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
THBS3-209ENST00000498500 BCL9O00512 1426 aa17.32■□□□□ 0.36
THBS3-209ENST00000498500 SLC15A2Q16348 729 aa17.32■□□□□ 0.36
THBS3-209ENST00000498500 SYT17Q9BSW7 474 aa17.32■□□□□ 0.36
THBS3-209ENST00000498500 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
THBS3-209ENST00000498500 EXOC5O00471 708 aa17.31■□□□□ 0.36
THBS3-209ENST00000498500 SOX12O15370 315 aa17.31■□□□□ 0.36
THBS3-209ENST00000498500 UTRNP46939 3433 aa17.31■□□□□ 0.36
THBS3-209ENST00000498500 CPSF1Q10570 1443 aaKnown RBP17.3■□□□□ 0.36
THBS3-209ENST00000498500 TRPM1Q7Z4N2 1603 aa17.3■□□□□ 0.36
THBS3-209ENST00000498500 CARD10Q9BWT7 1032 aa17.3■□□□□ 0.36
THBS3-209ENST00000498500 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
THBS3-209ENST00000498500 ARHGEF25Q86VW2 580 aa17.29■□□□□ 0.36
THBS3-209ENST00000498500 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
THBS3-209ENST00000498500 SIN3AQ96ST3 1273 aa17.28■□□□□ 0.36
THBS3-209ENST00000498500 SENP3-EIF4A1A0A087X0R7 540 aa17.27■□□□□ 0.36
THBS3-209ENST00000498500 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
THBS3-209ENST00000498500 TTC21BQ7Z4L5 1316 aa17.26■□□□□ 0.35
THBS3-209ENST00000498500 EVC2Q86UK5 1308 aa17.26■□□□□ 0.35
THBS3-209ENST00000498500 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
THBS3-209ENST00000498500 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
THBS3-209ENST00000498500 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
THBS3-209ENST00000498500 ARXQ96QS3 562 aa17.24■□□□□ 0.35
THBS3-209ENST00000498500 SGIP1Q9BQI5 828 aa17.24■□□□□ 0.35
THBS3-209ENST00000498500 TNS2Q63HR2 1409 aa17.23■□□□□ 0.35
THBS3-209ENST00000498500 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
THBS3-209ENST00000498500 L3MBTL2Q969R5 705 aa17.23■□□□□ 0.35
THBS3-209ENST00000498500 BTAF1O14981 1849 aa17.23■□□□□ 0.35
THBS3-209ENST00000498500 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
THBS3-209ENST00000498500 NFAT5O94916 1531 aa17.21■□□□□ 0.34
THBS3-209ENST00000498500 GPR162Q16538 588 aa17.2■□□□□ 0.34
THBS3-209ENST00000498500 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
THBS3-209ENST00000498500 LTN1O94822 1766 aa17.2■□□□□ 0.34
THBS3-209ENST00000498500 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
THBS3-209ENST00000498500 KLHL34Q8N239 644 aa17.19■□□□□ 0.34
THBS3-209ENST00000498500 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
THBS3-209ENST00000498500 ABCC6O95255 1503 aa17.19■□□□□ 0.34
THBS3-209ENST00000498500 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
THBS3-209ENST00000498500 MAP3K5Q99683 1374 aa17.17■□□□□ 0.34
THBS3-209ENST00000498500 IL2RBP14784 551 aa17.17■□□□□ 0.34
THBS3-209ENST00000498500 MON2Q7Z3U7 1717 aa17.17■□□□□ 0.34
THBS3-209ENST00000498500 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
THBS3-209ENST00000498500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
THBS3-209ENST00000498500 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
THBS3-209ENST00000498500 ERBB3P21860 1342 aa17.16■□□□□ 0.34
THBS3-209ENST00000498500 QSER1Q2KHR3 1735 aa17.15■□□□□ 0.34
THBS3-209ENST00000498500 GIGYF1O75420 1035 aaPredicted RBP17.14■□□□□ 0.33
THBS3-209ENST00000498500 POLD1P28340 1107 aa17.14■□□□□ 0.33
THBS3-209ENST00000498500 LRRC4BQ9NT99 713 aa17.14■□□□□ 0.33
THBS3-209ENST00000498500 SLC16A10Q8TF71 515 aa17.13■□□□□ 0.33
THBS3-209ENST00000498500 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
THBS3-209ENST00000498500 USP54Q70EL1 1684 aa17.12■□□□□ 0.33
THBS3-209ENST00000498500 ROCK2O75116 1388 aaKnown RBP17.12■□□□□ 0.33
THBS3-209ENST00000498500 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
THBS3-209ENST00000498500 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
THBS3-209ENST00000498500 USP31Q70CQ4 1352 aa17.11■□□□□ 0.33
THBS3-209ENST00000498500 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
THBS3-209ENST00000498500 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
THBS3-209ENST00000498500 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
THBS3-209ENST00000498500 NME9Q86XW9 330 aa17.1■□□□□ 0.33
THBS3-209ENST00000498500 DDX54Q8TDD1 881 aaKnown RBP17.1■□□□□ 0.33
THBS3-209ENST00000498500 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
THBS3-209ENST00000498500 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.33
THBS3-209ENST00000498500 PNPLA7Q6ZV29 1317 aa17.08■□□□□ 0.32
THBS3-209ENST00000498500 SYTL4Q96C24 671 aaPredicted RBP17.08■□□□□ 0.32
THBS3-209ENST00000498500 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
THBS3-209ENST00000498500 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
THBS3-209ENST00000498500 KCNQ4P56696 695 aa17.06■□□□□ 0.32
THBS3-209ENST00000498500 HDGFL2Q7Z4V5 671 aaPredicted RBP17.06■□□□□ 0.32
THBS3-209ENST00000498500 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
THBS3-209ENST00000498500 LY75O60449 1722 aa17.06■□□□□ 0.32
THBS3-209ENST00000498500 DOT1LQ8TEK3 1739 aa17.06■□□□□ 0.32
THBS3-209ENST00000498500 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
THBS3-209ENST00000498500 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
THBS3-209ENST00000498500 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
THBS3-209ENST00000498500 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
THBS3-209ENST00000498500 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms