RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
SMIM19-206ENST00000498447 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
SMIM19-206ENST00000498447 ARHGEF25Q86VW2 580 aa25.1■■□□□ 1.61
SMIM19-206ENST00000498447 KCNH5Q8NCM2 988 aa25.1■■□□□ 1.61
SMIM19-206ENST00000498447 DDB1Q16531 1140 aa25.09■■□□□ 1.61
SMIM19-206ENST00000498447 NBPF14Q5TI25 921 aa25.08■■□□□ 1.61
SMIM19-206ENST00000498447 RGPD5Q99666 1765 aa25.08■■□□□ 1.6
SMIM19-206ENST00000498447 SBF2Q86WG5 1849 aa25.07■■□□□ 1.6
SMIM19-206ENST00000498447 KTN1Q86UP2 1357 aaKnown RBP25.07■■□□□ 1.6
SMIM19-206ENST00000498447 SOX12O15370 315 aa25.07■■□□□ 1.6
SMIM19-206ENST00000498447 NFAT5O94916 1531 aa25.07■■□□□ 1.6
SMIM19-206ENST00000498447 MON2Q7Z3U7 1717 aa25.06■■□□□ 1.6
SMIM19-206ENST00000498447 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
SMIM19-206ENST00000498447 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
SMIM19-206ENST00000498447 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
SMIM19-206ENST00000498447 CDCA7Q9BWT1 371 aaPredicted RBP25.04■■□□□ 1.6
SMIM19-206ENST00000498447 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
SMIM19-206ENST00000498447 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
SMIM19-206ENST00000498447 ABCC6O95255 1503 aa25.02■■□□□ 1.6
SMIM19-206ENST00000498447 MARCH10Q8NA82 808 aaPredicted RBP25.01■■□□□ 1.59
SMIM19-206ENST00000498447 PLSCR1O15162 318 aa25■■□□□ 1.59
SMIM19-206ENST00000498447 CARD11Q9BXL7 1154 aa25■■□□□ 1.59
SMIM19-206ENST00000498447 BCL9O00512 1426 aa24.99■■□□□ 1.59
SMIM19-206ENST00000498447 USP54Q70EL1 1684 aa24.99■■□□□ 1.59
SMIM19-206ENST00000498447 PTF1AQ7RTS3 328 aa24.99■■□□□ 1.59
SMIM19-206ENST00000498447 BCL11BQ9C0K0 894 aaPredicted RBP24.99■■□□□ 1.59
SMIM19-206ENST00000498447 CD163L1Q9NR16 1453 aa24.99■■□□□ 1.59
SMIM19-206ENST00000498447 USP31Q70CQ4 1352 aa24.98■■□□□ 1.59
SMIM19-206ENST00000498447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.98■■□□□ 1.59
SMIM19-206ENST00000498447 CCDC7Q96M83 1385 aa24.97■■□□□ 1.59
SMIM19-206ENST00000498447 NME9Q86XW9 330 aa24.94■■□□□ 1.58
SMIM19-206ENST00000498447 TMC1Q8TDI8 760 aa24.94■■□□□ 1.58
SMIM19-206ENST00000498447 SPON1Q9HCB6 807 aa24.94■■□□□ 1.58
SMIM19-206ENST00000498447 ANO8Q9HCE9 1232 aaPredicted RBP24.94■■□□□ 1.58
SMIM19-206ENST00000498447 EXOC5O00471 708 aa24.93■■□□□ 1.58
SMIM19-206ENST00000498447 TNS2Q63HR2 1409 aa24.93■■□□□ 1.58
SMIM19-206ENST00000498447 KCNQ2O43526 872 aa24.92■■□□□ 1.58
SMIM19-206ENST00000498447 HDGFL2Q7Z4V5 671 aaPredicted RBP24.92■■□□□ 1.58
SMIM19-206ENST00000498447 LTN1O94822 1766 aa24.92■■□□□ 1.58
SMIM19-206ENST00000498447 TONSLQ96HA7 1378 aa24.92■■□□□ 1.58
SMIM19-206ENST00000498447 ERBB3P21860 1342 aa24.91■■□□□ 1.58
SMIM19-206ENST00000498447 EDC4Q6P2E9 1401 aaKnown RBP24.91■■□□□ 1.58
SMIM19-206ENST00000498447 PROM2Q8N271 834 aa24.9■■□□□ 1.58
SMIM19-206ENST00000498447 SLC12A5Q9H2X9 1139 aa24.9■■□□□ 1.58
SMIM19-206ENST00000498447 PPP1R1BQ9UD71 204 aaPredicted RBP24.89■■□□□ 1.58
SMIM19-206ENST00000498447 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
SMIM19-206ENST00000498447 A0A1W2PP64 1363 aa24.88■■□□□ 1.57
SMIM19-206ENST00000498447 NLRP2Q9NX02 1062 aa24.87■■□□□ 1.57
SMIM19-206ENST00000498447 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
SMIM19-206ENST00000498447 NHSQ6T4R5 1651 aa24.85■■□□□ 1.57
SMIM19-206ENST00000498447 TXNRD1Q16881 649 aa24.85■■□□□ 1.57
SMIM19-206ENST00000498447 PUS7Q96PZ0 661 aaKnown RBP24.85■■□□□ 1.57
SMIM19-206ENST00000498447 NINLQ9Y2I6 1382 aa24.84■■□□□ 1.57
SMIM19-206ENST00000498447 ANKRD24Q8TF21 1146 aa24.84■■□□□ 1.57
SMIM19-206ENST00000498447 IL2RBP14784 551 aa24.83■■□□□ 1.57
SMIM19-206ENST00000498447 PDGFDQ9GZP0 370 aaPredicted RBP24.83■■□□□ 1.57
SMIM19-206ENST00000498447 STK32BQ9NY57 414 aa24.81■■□□□ 1.56
SMIM19-206ENST00000498447 ACSBG1Q96GR2 724 aa24.8■■□□□ 1.56
SMIM19-206ENST00000498447 TESK2Q96S53 571 aa24.8■■□□□ 1.56
SMIM19-206ENST00000498447 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
SMIM19-206ENST00000498447 SLC15A2Q16348 729 aa24.78■■□□□ 1.56
SMIM19-206ENST00000498447 ST20-MTHFSA0A0A6YYL1 179 aa24.77■■□□□ 1.56
SMIM19-206ENST00000498447 FAM208AQ9UK61 1670 aaKnown RBP24.76■■□□□ 1.55
SMIM19-206ENST00000498447 IP6K1Q92551 441 aa24.76■■□□□ 1.55
SMIM19-206ENST00000498447 BTAF1O14981 1849 aa24.76■■□□□ 1.55
SMIM19-206ENST00000498447 MYOM1P52179 1685 aa24.75■■□□□ 1.55
SMIM19-206ENST00000498447 YY1P25490 414 aa24.74■■□□□ 1.55
SMIM19-206ENST00000498447 PAPPAQ13219 1627 aa24.74■■□□□ 1.55
SMIM19-206ENST00000498447 DCAF8L1A6NGE4 600 aa24.73■■□□□ 1.55
SMIM19-206ENST00000498447 PTGER2P43116 358 aa24.73■■□□□ 1.55
SMIM19-206ENST00000498447 ATF5Q9Y2D1 282 aaPredicted RBP24.73■■□□□ 1.55
SMIM19-206ENST00000498447 KAT6BQ8WYB5 2073 aa24.73■■□□□ 1.55
SMIM19-206ENST00000498447 LTV1Q96GA3 475 aaPredicted RBP24.72■■□□□ 1.55
SMIM19-206ENST00000498447 COG3Q96JB2 828 aa24.72■■□□□ 1.55
SMIM19-206ENST00000498447 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
SMIM19-206ENST00000498447 MAP3K19Q56UN5 1328 aa24.7■■□□□ 1.54
SMIM19-206ENST00000498447 ANKRD36BQ8N2N9 1353 aa24.69■■□□□ 1.54
SMIM19-206ENST00000498447 MTFR1LQ9H019 292 aa24.69■■□□□ 1.54
SMIM19-206ENST00000498447 HOXC9P31274 260 aa24.68■■□□□ 1.54
SMIM19-206ENST00000498447 FBLN1P23142 703 aa24.67■■□□□ 1.54
SMIM19-206ENST00000498447 DDX54Q8TDD1 881 aaKnown RBP24.67■■□□□ 1.54
SMIM19-206ENST00000498447 AMPHP49418 695 aa24.66■■□□□ 1.54
SMIM19-206ENST00000498447 LRRC4BQ9NT99 713 aa24.65■■□□□ 1.54
SMIM19-206ENST00000498447 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
SMIM19-206ENST00000498447 ZNF827Q17R98 1081 aa24.64■■□□□ 1.54
SMIM19-206ENST00000498447 SGIP1Q9BQI5 828 aa24.64■■□□□ 1.54
SMIM19-206ENST00000498447 UTRNP46939 3433 aa24.64■■□□□ 1.53
SMIM19-206ENST00000498447 RTL1A6NKG5 1358 aa24.63■■□□□ 1.53
SMIM19-206ENST00000498447 DOT1LQ8TEK3 1739 aa24.62■■□□□ 1.53
SMIM19-206ENST00000498447 SHANK3Q9BYB0 1731 aa24.62■■□□□ 1.53
SMIM19-206ENST00000498447 TMF1P82094 1093 aa24.62■■□□□ 1.53
SMIM19-206ENST00000498447 FHDC1Q9C0D6 1143 aaPredicted RBP24.62■■□□□ 1.53
SMIM19-206ENST00000498447 USP47Q96K76 1375 aa24.62■■□□□ 1.53
SMIM19-206ENST00000498447 MEGF6O75095 1541 aa24.61■■□□□ 1.53
SMIM19-206ENST00000498447 SYT17Q9BSW7 474 aa24.61■■□□□ 1.53
SMIM19-206ENST00000498447 FYB1O15117 783 aa24.6■■□□□ 1.53
SMIM19-206ENST00000498447 RRS1Q15050 365 aaKnown RBP24.6■■□□□ 1.53
SMIM19-206ENST00000498447 SLC27A3Q5K4L6 730 aa24.6■■□□□ 1.53
SMIM19-206ENST00000498447 ZCRB1Q8TBF4 217 aaKnown RBP24.59■■□□□ 1.53
SMIM19-206ENST00000498447 SYTL4Q96C24 671 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms