RNA–Protein interactions for RNA: ENST00000498189.1

BBS9-215, Transcript of Bardet-Biedl syndrome 9, human

TSL 2

Gene BBS9, Length 614 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-215	ENST00000498189	ERICH6	Q7L0X2	663 aa		10.26	□□□□□ -0.77
BBS9-215	ENST00000498189	STAC3	Q96MF2	364 aa		10.26	□□□□□ -0.77
BBS9-215	ENST00000498189	ADAM33	Q9BZ11	813 aa		10.26	□□□□□ -0.77
BBS9-215	ENST00000498189	DAXX	Q9UER7	740 aa	Predicted RBP	10.26	□□□□□ -0.77
BBS9-215	ENST00000498189	VPS9D1	Q9Y2B5	631 aa		10.26	□□□□□ -0.77
BBS9-215	ENST00000498189	DPYSL4	O14531	572 aa		10.25	□□□□□ -0.77
BBS9-215	ENST00000498189	PCDHGA10	Q9Y5H3	936 aa		10.25	□□□□□ -0.77
BBS9-215	ENST00000498189	PTCH1	Q13635	1447 aa		10.24	□□□□□ -0.77
BBS9-215	ENST00000498189	PRAG1	Q86YV5	1406 aa		10.24	□□□□□ -0.77
BBS9-215	ENST00000498189	NEXMIF	Q5QGS0	1516 aa		10.24	□□□□□ -0.77
BBS9-215	ENST00000498189	HRC	P23327	699 aa		10.24	□□□□□ -0.77
BBS9-215	ENST00000498189	CLTCL1	P53675	1640 aa		10.24	□□□□□ -0.77
BBS9-215	ENST00000498189	ILDR2	Q71H61	639 aa		10.23	□□□□□ -0.77
BBS9-215	ENST00000498189	SLC4A5	Q9BY07	1137 aa		10.23	□□□□□ -0.77
BBS9-215	ENST00000498189	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	PHLPP1	O60346	1717 aa		10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	XRN1	Q8IZH2	1706 aa	Known RBP	10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	MPHOSPH9	Q99550	1183 aa		10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	ADGRL3	Q9HAR2	1447 aa		10.22	□□□□□ -0.77
BBS9-215	ENST00000498189	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.21	□□□□□ -0.77
BBS9-215	ENST00000498189	ZNF772	Q68DY9	489 aa	Predicted RBP	10.21	□□□□□ -0.77
BBS9-215	ENST00000498189	LRRC59	Q96AG4	307 aa	Known RBP	10.21	□□□□□ -0.77
BBS9-215	ENST00000498189	HCST	Q9UBK5	93 aa		10.21	□□□□□ -0.77
BBS9-215	ENST00000498189	SETD5	Q9C0A6	1442 aa		10.21	□□□□□ -0.78
BBS9-215	ENST00000498189	PHF14	O94880	888 aa		10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	LRPPRC	P42704	1394 aa	Known RBP	10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	TYW1B	Q6NUM6	668 aa		10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	FBXW7	Q969H0	707 aa		10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	ZBED2	Q9BTP6	218 aa		10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	NRXN3	Q9Y4C0	1643 aa		10.2	□□□□□ -0.78
BBS9-215	ENST00000498189	PTPRU	Q92729	1446 aa		10.19	□□□□□ -0.78
BBS9-215	ENST00000498189	MET	P08581	1390 aa		10.19	□□□□□ -0.78
BBS9-215	ENST00000498189	MEX3C	Q5U5Q3	659 aa	Known RBP	10.19	□□□□□ -0.78
BBS9-215	ENST00000498189	SIRT1	Q96EB6	747 aa		10.19	□□□□□ -0.78
BBS9-215	ENST00000498189	WDR70	Q9NW82	654 aa		10.19	□□□□□ -0.78
BBS9-215	ENST00000498189	BRINP3	Q76B58	766 aa		10.18	□□□□□ -0.78
BBS9-215	ENST00000498189	KCTD12	Q96CX2	325 aa	Known RBP	10.18	□□□□□ -0.78
BBS9-215	ENST00000498189	PPL	O60437	1756 aa		10.18	□□□□□ -0.78
BBS9-215	ENST00000498189	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.17	□□□□□ -0.78
BBS9-215	ENST00000498189	E2F4	Q16254	413 aa		10.17	□□□□□ -0.78
BBS9-215	ENST00000498189	RBM33	Q96EV2	1170 aa	Known RBP	10.17	□□□□□ -0.78
BBS9-215	ENST00000498189	SHPRH	Q149N8	1683 aa		10.17	□□□□□ -0.78
BBS9-215	ENST00000498189	COL16A1	Q07092	1604 aa	Predicted RBP	10.17	□□□□□ -0.78
BBS9-215	ENST00000498189	MST1R	Q04912	1400 aa		10.16	□□□□□ -0.78
BBS9-215	ENST00000498189	EPAS1	Q99814	870 aa		10.16	□□□□□ -0.78
BBS9-215	ENST00000498189	ASXL1	Q8IXJ9	1541 aa		10.16	□□□□□ -0.78
BBS9-215	ENST00000498189	TECPR2	O15040	1411 aa		10.16	□□□□□ -0.78
BBS9-215	ENST00000498189	ABCC11	Q96J66	1382 aa		10.15	□□□□□ -0.78
BBS9-215	ENST00000498189	LAMC1	P11047	1609 aa		10.15	□□□□□ -0.78
BBS9-215	ENST00000498189	PPP1R3G	B7ZBB8	358 aa		10.15	□□□□□ -0.78
BBS9-215	ENST00000498189	DDX12P	Q92771	950 aa		10.15	□□□□□ -0.78
BBS9-215	ENST00000498189	SPATA31E1	Q6ZUB1	1445 aa		10.15	□□□□□ -0.79
BBS9-215	ENST00000498189	DHX57	Q6P158	1386 aa	Known RBP	10.14	□□□□□ -0.79
BBS9-215	ENST00000498189	NPHP3	Q7Z494	1330 aa		10.14	□□□□□ -0.79
BBS9-215	ENST00000498189	MYOM2	P54296	1465 aa		10.14	□□□□□ -0.79
BBS9-215	ENST00000498189	EIF3A	Q14152	1382 aa	Known RBP	10.14	□□□□□ -0.79
BBS9-215	ENST00000498189	C1orf167	Q5SNV9	1468 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	COL9A1	P20849	921 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	RGL3	Q3MIN7	710 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	C6orf132	Q5T0Z8	1188 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	MRPL50	Q8N5N7	158 aa	Known RBP	10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	NHSL1	Q5SYE7	1610 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	PIK3C2G	O75747	1445 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	CDC42BPG	Q6DT37	1551 aa		10.13	□□□□□ -0.79
BBS9-215	ENST00000498189	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	PRKCSH	P14314	528 aa	Predicted RBP	10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	PDIA6	Q15084	440 aa		10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	NBPF3	Q9H094	633 aa		10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	SETD1A	O15047	1707 aa	Known RBP	10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	KNDC1	Q76NI1	1749 aa		10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	RAB3GAP2	Q9H2M9	1393 aa		10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	ROBO2	Q9HCK4	1378 aa		10.12	□□□□□ -0.79
BBS9-215	ENST00000498189	IFT172	Q9UG01	1749 aa		10.11	□□□□□ -0.79
BBS9-215	ENST00000498189	GOLGA8CP	A6NN73	597 aa		10.11	□□□□□ -0.79
BBS9-215	ENST00000498189	PROX2	Q3B8N5	592 aa		10.11	□□□□□ -0.79
BBS9-215	ENST00000498189	C14orf93	Q9H972	538 aa	Known RBP	10.11	□□□□□ -0.79
BBS9-215	ENST00000498189	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	NALCN	Q8IZF0	1738 aa		10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	SOS2	Q07890	1332 aa	Predicted RBP	10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	RXRB	P28702	533 aa		10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	PSME1	Q06323	249 aa		10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	NGLY1	Q96IV0	654 aa		10.1	□□□□□ -0.79
BBS9-215	ENST00000498189	ADGRF5	Q8IZF2	1346 aa		10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	PTPN5	P54829	565 aa		10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	RGS17	Q9UGC6	210 aa	Predicted RBP	10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	RABGEF1	Q9UJ41	708 aa		10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	NRXN1	Q9ULB1	1477 aa		10.09	□□□□□ -0.79
BBS9-215	ENST00000498189	NBR1	Q14596	966 aa		10.08	□□□□□ -0.8
BBS9-215	ENST00000498189	ESCO1	Q5FWF5	840 aa		10.08	□□□□□ -0.8
BBS9-215	ENST00000498189	PLA2G2E	Q9NZK7	142 aa		10.08	□□□□□ -0.8
BBS9-215	ENST00000498189	PNPLA6	Q8IY17	1366 aa		10.08	□□□□□ -0.8
BBS9-215	ENST00000498189	KIF1A	Q12756	1690 aa		10.08	□□□□□ -0.8
BBS9-215	ENST00000498189	DLC1	Q96QB1	1528 aa		10.07	□□□□□ -0.8
BBS9-215	ENST00000498189	WNT2B	Q93097	391 aa		10.07	□□□□□ -0.8
BBS9-215	ENST00000498189	TSHZ2	Q9NRE2	1034 aa		10.07	□□□□□ -0.8
BBS9-215	ENST00000498189	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.06	□□□□□ -0.8
BBS9-215	ENST00000498189	NUTM2E	B1AL46	878 aa	Predicted RBP	10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms