RNA–Protein interactions for RNA: ENST00000498135.5

TMEM50A-206, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 776 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-206ENST00000498135 POLR3AO14802 1390 aaPredicted RBP29.03■■■□□ 2.24
TMEM50A-206ENST00000498135 MARCH10Q8NA82 808 aaPredicted RBP29.03■■■□□ 2.24
TMEM50A-206ENST00000498135 ACEP12821 1306 aa29.02■■■□□ 2.24
TMEM50A-206ENST00000498135 PELP1Q8IZL8 1130 aaKnown RBP29.02■■■□□ 2.24
TMEM50A-206ENST00000498135 AKAP12Q02952 1782 aa29.01■■■□□ 2.23
TMEM50A-206ENST00000498135 GCP02774 474 aa29.01■■■□□ 2.23
TMEM50A-206ENST00000498135 AATKQ6ZMQ8 1374 aa29.01■■■□□ 2.23
TMEM50A-206ENST00000498135 ZBTB7CA1YPR0 619 aa29■■■□□ 2.23
TMEM50A-206ENST00000498135 TOM1L2Q6ZVM7 507 aa28.99■■■□□ 2.23
TMEM50A-206ENST00000498135 NLRP13Q86W25 1043 aa28.99■■■□□ 2.23
TMEM50A-206ENST00000498135 KLHL34Q8N239 644 aa28.98■■■□□ 2.23
TMEM50A-206ENST00000498135 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
TMEM50A-206ENST00000498135 CDCA7Q9BWT1 371 aaPredicted RBP28.96■■■□□ 2.23
TMEM50A-206ENST00000498135 TOPAZ1Q8N9V7 1692 aa28.96■■■□□ 2.23
TMEM50A-206ENST00000498135 CDK19Q9BWU1 502 aa28.93■■■□□ 2.22
TMEM50A-206ENST00000498135 CCDC61Q9Y6R9 512 aa28.92■■■□□ 2.22
TMEM50A-206ENST00000498135 PLEKHG3A1L390 1219 aa28.91■■■□□ 2.22
TMEM50A-206ENST00000498135 GOLGB1Q14789 3259 aaKnown RBP28.9■■■□□ 2.22
TMEM50A-206ENST00000498135 PAPPAQ13219 1627 aa28.9■■■□□ 2.22
TMEM50A-206ENST00000498135 ARHGEF28Q8N1W1 1705 aaKnown RBP28.89■■■□□ 2.22
TMEM50A-206ENST00000498135 HSPA6P17066 643 aa28.89■■■□□ 2.22
TMEM50A-206ENST00000498135 WDR17Q8IZU2 1322 aa28.89■■■□□ 2.21
TMEM50A-206ENST00000498135 POLD1P28340 1107 aa28.88■■■□□ 2.21
TMEM50A-206ENST00000498135 ATP10DQ9P241 1426 aa28.86■■■□□ 2.21
TMEM50A-206ENST00000498135 NHSQ6T4R5 1651 aa28.84■■■□□ 2.21
TMEM50A-206ENST00000498135 EXOC5O00471 708 aa28.84■■■□□ 2.21
TMEM50A-206ENST00000498135 GRIN3BO60391 1043 aa28.84■■■□□ 2.21
TMEM50A-206ENST00000498135 ZNF827Q17R98 1081 aa28.84■■■□□ 2.21
TMEM50A-206ENST00000498135 NLGN2Q8NFZ4 835 aa28.82■■■□□ 2.2
TMEM50A-206ENST00000498135 SLC16A10Q8TF71 515 aa28.82■■■□□ 2.2
TMEM50A-206ENST00000498135 GPBP1L1Q9HC44 474 aaPredicted RBP28.81■■■□□ 2.2
TMEM50A-206ENST00000498135 KDM2AQ9Y2K7 1162 aa28.81■■■□□ 2.2
TMEM50A-206ENST00000498135 COL18A1P39060 1754 aa28.8■■■□□ 2.2
TMEM50A-206ENST00000498135 SLIT3O75094 1523 aa28.8■■■□□ 2.2
TMEM50A-206ENST00000498135 NLRP6P59044 892 aa28.79■■■□□ 2.2
TMEM50A-206ENST00000498135 CARD10Q9BWT7 1032 aa28.79■■■□□ 2.2
TMEM50A-206ENST00000498135 AXIN2Q9Y2T1 843 aa28.79■■■□□ 2.2
TMEM50A-206ENST00000498135 BRD4O60885 1362 aaPredicted RBP28.78■■■□□ 2.2
TMEM50A-206ENST00000498135 CSB-PGBD3P0DP91 1061 aa28.78■■■□□ 2.2
TMEM50A-206ENST00000498135 YBX3P16989 372 aaKnown RBP eCLIP28.78■■■□□ 2.2
TMEM50A-206ENST00000498135 ACSBG1Q96GR2 724 aa28.78■■■□□ 2.2
TMEM50A-206ENST00000498135 TNS2Q63HR2 1409 aa28.77■■■□□ 2.2
TMEM50A-206ENST00000498135 PPIP5K1Q6PFW1 1433 aa28.76■■■□□ 2.19
TMEM50A-206ENST00000498135 COL24A1Q17RW2 1714 aa28.75■■■□□ 2.19
TMEM50A-206ENST00000498135 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
TMEM50A-206ENST00000498135 CPSF1Q10570 1443 aaKnown RBP28.74■■■□□ 2.19
TMEM50A-206ENST00000498135 QSER1Q2KHR3 1735 aa28.73■■■□□ 2.19
TMEM50A-206ENST00000498135 USP6P35125 1406 aa28.72■■■□□ 2.19
TMEM50A-206ENST00000498135 LRRC4BQ9NT99 713 aa28.72■■■□□ 2.19
TMEM50A-206ENST00000498135 BTAF1O14981 1849 aa28.71■■■□□ 2.19
TMEM50A-206ENST00000498135 AKT1S1Q96B36 256 aa28.71■■■□□ 2.19
TMEM50A-206ENST00000498135 CCDC7Q96M83 1385 aa28.71■■■□□ 2.19
TMEM50A-206ENST00000498135 PNPLA7Q6ZV29 1317 aa28.69■■■□□ 2.18
TMEM50A-206ENST00000498135 ZNF526Q8TF50 670 aaPredicted RBP28.69■■■□□ 2.18
TMEM50A-206ENST00000498135 ABCC6O95255 1503 aa28.69■■■□□ 2.18
TMEM50A-206ENST00000498135 RGPD5Q99666 1765 aa28.68■■■□□ 2.18
TMEM50A-206ENST00000498135 SRPK2P78362 688 aaKnown RBP28.68■■■□□ 2.18
TMEM50A-206ENST00000498135 TRPM1Q7Z4N2 1603 aa28.68■■■□□ 2.18
TMEM50A-206ENST00000498135 STAC3Q96MF2 364 aa28.67■■■□□ 2.18
TMEM50A-206ENST00000498135 ARHGEF25Q86VW2 580 aa28.66■■■□□ 2.18
TMEM50A-206ENST00000498135 TFCP2L1Q9NZI6 479 aa28.65■■■□□ 2.18
TMEM50A-206ENST00000498135 ADCY9O60503 1353 aa28.64■■■□□ 2.18
TMEM50A-206ENST00000498135 PIK3C2AO00443 1686 aa28.64■■■□□ 2.17
TMEM50A-206ENST00000498135 SLC27A3Q5K4L6 730 aa28.63■■■□□ 2.17
TMEM50A-206ENST00000498135 KAT6BQ8WYB5 2073 aa28.62■■■□□ 2.17
TMEM50A-206ENST00000498135 KCNH5Q8NCM2 988 aa28.61■■■□□ 2.17
TMEM50A-206ENST00000498135 TUBGCP6Q96RT7 1819 aa28.61■■■□□ 2.17
TMEM50A-206ENST00000498135 SOX12O15370 315 aa28.6■■■□□ 2.17
TMEM50A-206ENST00000498135 CABP2Q9NPB3 220 aa28.6■■■□□ 2.17
TMEM50A-206ENST00000498135 APLP1P51693 650 aa28.58■■■□□ 2.17
TMEM50A-206ENST00000498135 CABP1Q9NZU7 370 aa28.57■■■□□ 2.16
TMEM50A-206ENST00000498135 QRICH2Q9H0J4 1663 aa28.57■■■□□ 2.16
TMEM50A-206ENST00000498135 MSH5O43196 834 aa28.53■■■□□ 2.16
TMEM50A-206ENST00000498135 IL2RBP14784 551 aa28.53■■■□□ 2.16
TMEM50A-206ENST00000498135 CAPN15O75808 1086 aa28.52■■■□□ 2.16
TMEM50A-206ENST00000498135 KIF3CO14782 793 aa28.51■■■□□ 2.15
TMEM50A-206ENST00000498135 NLRP2Q9NX02 1062 aa28.51■■■□□ 2.15
TMEM50A-206ENST00000498135 KCNQ4P56696 695 aa28.5■■■□□ 2.15
TMEM50A-206ENST00000498135 NFAT5O94916 1531 aa28.49■■■□□ 2.15
TMEM50A-206ENST00000498135 CD2APQ9Y5K6 639 aa28.49■■■□□ 2.15
TMEM50A-206ENST00000498135 DNAJC5GQ8N7S2 189 aa28.48■■■□□ 2.15
TMEM50A-206ENST00000498135 CENPJQ9HC77 1338 aaPredicted RBP28.47■■■□□ 2.15
TMEM50A-206ENST00000498135 TTC21BQ7Z4L5 1316 aa28.46■■■□□ 2.15
TMEM50A-206ENST00000498135 MSL1Q68DK7 614 aa28.46■■■□□ 2.15
TMEM50A-206ENST00000498135 ERBB3P21860 1342 aa28.45■■■□□ 2.15
TMEM50A-206ENST00000498135 KIAA1210Q9ULL0 1709 aa28.44■■■□□ 2.14
TMEM50A-206ENST00000498135 COL13A1Q5TAT6 717 aaPredicted RBP28.44■■■□□ 2.14
TMEM50A-206ENST00000498135 COL23A1Q86Y22 540 aaPredicted RBP28.44■■■□□ 2.14
TMEM50A-206ENST00000498135 SYTL4Q96C24 671 aaPredicted RBP28.42■■■□□ 2.14
TMEM50A-206ENST00000498135 TTC21AQ8NDW8 1320 aa28.42■■■□□ 2.14
TMEM50A-206ENST00000498135 LY75O60449 1722 aa28.4■■■□□ 2.14
TMEM50A-206ENST00000498135 DDX54Q8TDD1 881 aaKnown RBP28.39■■■□□ 2.14
TMEM50A-206ENST00000498135 ZNF692Q9BU19 519 aaPredicted RBP28.39■■■□□ 2.14
TMEM50A-206ENST00000498135 CCNL1Q9UK58 526 aaPredicted RBP28.39■■■□□ 2.14
TMEM50A-206ENST00000498135 TNS4Q8IZW8 715 aa28.38■■■□□ 2.13
TMEM50A-206ENST00000498135 TOMM70O94826 608 aa28.37■■■□□ 2.13
TMEM50A-206ENST00000498135 PRELPP51888 382 aa28.37■■■□□ 2.13
TMEM50A-206ENST00000498135 NBPF1Q3BBV0 1214 aa28.37■■■□□ 2.13
TMEM50A-206ENST00000498135 PRIM1P49642 420 aaKnown RBP28.36■■■□□ 2.13
TMEM50A-206ENST00000498135 WWC3Q9ULE0 1092 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms