RNA–Protein interactions for RNA: ENST00000498122.4

CHEK1-205, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-205ENST00000498122 BTG4Q9NY30 223 aa12.26□□□□□ -0.45
CHEK1-205ENST00000498122 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
CHEK1-205ENST00000498122 ATRNO75882 1429 aa12.26□□□□□ -0.45
CHEK1-205ENST00000498122 QTRT2Q9H974 415 aaKnown RBP12.25□□□□□ -0.45
CHEK1-205ENST00000498122 ZBTB7CA1YPR0 619 aa12.24□□□□□ -0.45
CHEK1-205ENST00000498122 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
CHEK1-205ENST00000498122 USP54Q70EL1 1684 aa12.24□□□□□ -0.45
CHEK1-205ENST00000498122 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
CHEK1-205ENST00000498122 COG3Q96JB2 828 aa12.24□□□□□ -0.45
CHEK1-205ENST00000498122 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
CHEK1-205ENST00000498122 AATKQ6ZMQ8 1374 aa12.22□□□□□ -0.45
CHEK1-205ENST00000498122 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
CHEK1-205ENST00000498122 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
CHEK1-205ENST00000498122 VPS72Q15906 364 aa12.22□□□□□ -0.45
CHEK1-205ENST00000498122 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
CHEK1-205ENST00000498122 COL14A1Q05707 1796 aaKnown RBP12.21□□□□□ -0.45
CHEK1-205ENST00000498122 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.45
CHEK1-205ENST00000498122 LARP1Q6PKG0 1096 aaKnown RBP12.21□□□□□ -0.45
CHEK1-205ENST00000498122 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
CHEK1-205ENST00000498122 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
CHEK1-205ENST00000498122 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
CHEK1-205ENST00000498122 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
CHEK1-205ENST00000498122 STRN4Q9NRL3 753 aa12.2□□□□□ -0.46
CHEK1-205ENST00000498122 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
CHEK1-205ENST00000498122 COL18A1P39060 1754 aa12.2□□□□□ -0.46
CHEK1-205ENST00000498122 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
CHEK1-205ENST00000498122 GLI3P10071 1580 aa12.19□□□□□ -0.46
CHEK1-205ENST00000498122 RXRBP28702 533 aa12.19□□□□□ -0.46
CHEK1-205ENST00000498122 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
CHEK1-205ENST00000498122 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
CHEK1-205ENST00000498122 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
CHEK1-205ENST00000498122 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
CHEK1-205ENST00000498122 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
CHEK1-205ENST00000498122 IP6K1Q92551 441 aa12.18□□□□□ -0.46
CHEK1-205ENST00000498122 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.461e-11■■■■■ 61.6
CHEK1-205ENST00000498122 RGS12O14924 1447 aa12.18□□□□□ -0.46
CHEK1-205ENST00000498122 HOXC9P31274 260 aa12.17□□□□□ -0.46
CHEK1-205ENST00000498122 POLKQ9UBT6 870 aa12.17□□□□□ -0.46
CHEK1-205ENST00000498122 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.17□□□□□ -0.46
CHEK1-205ENST00000498122 NWD2Q9ULI1 1742 aa12.17□□□□□ -0.46
CHEK1-205ENST00000498122 SPATA31A1Q5TZJ5 1347 aa12.16□□□□□ -0.46
CHEK1-205ENST00000498122 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
CHEK1-205ENST00000498122 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
CHEK1-205ENST00000498122 HSP90AB2PQ58FF8 381 aa12.16□□□□□ -0.46
CHEK1-205ENST00000498122 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
CHEK1-205ENST00000498122 CCDC9Q9Y3X0 531 aaKnown RBP12.16□□□□□ -0.46
CHEK1-205ENST00000498122 NSD2O96028 1365 aa12.16□□□□□ -0.46
CHEK1-205ENST00000498122 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
CHEK1-205ENST00000498122 ERBB3P21860 1342 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 ONECUT3O60422 494 aaPredicted RBP12.15□□□□□ -0.46
CHEK1-205ENST00000498122 EVA1CP58658 441 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 MORC1Q86VD1 984 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 USP35Q9P2H5 1018 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
CHEK1-205ENST00000498122 PEAK1Q9H792 1746 aa12.14□□□□□ -0.47
CHEK1-205ENST00000498122 AMPHP49418 695 aa12.14□□□□□ -0.47
CHEK1-205ENST00000498122 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
CHEK1-205ENST00000498122 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
CHEK1-205ENST00000498122 CDK12Q9NYV4 1490 aaPredicted RBP12.14□□□□□ -0.47
CHEK1-205ENST00000498122 CRB1P82279 1406 aa12.13□□□□□ -0.47
CHEK1-205ENST00000498122 ABCC6O95255 1503 aa12.13□□□□□ -0.47
CHEK1-205ENST00000498122 SEPT12Q8IYM1 358 aa12.13□□□□□ -0.47
CHEK1-205ENST00000498122 LTV1Q96GA3 475 aaPredicted RBP12.13□□□□□ -0.47
CHEK1-205ENST00000498122 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
CHEK1-205ENST00000498122 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
CHEK1-205ENST00000498122 TOM1L2Q6ZVM7 507 aa12.12□□□□□ -0.47
CHEK1-205ENST00000498122 TCP11L2Q8N4U5 519 aa12.12□□□□□ -0.47
CHEK1-205ENST00000498122 RTL1A6NKG5 1358 aa12.12□□□□□ -0.47
CHEK1-205ENST00000498122 INSRP06213 1382 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 FLT4P35916 1363 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
CHEK1-205ENST00000498122 CSB-PGBD3P0DP91 1061 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 CARD10Q9BWT7 1032 aa12.11□□□□□ -0.47
CHEK1-205ENST00000498122 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
CHEK1-205ENST00000498122 LTN1O94822 1766 aa12.1□□□□□ -0.47
CHEK1-205ENST00000498122 KIF24Q5T7B8 1368 aa12.1□□□□□ -0.47
CHEK1-205ENST00000498122 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
CHEK1-205ENST00000498122 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
CHEK1-205ENST00000498122 RGPD5Q99666 1765 aa12.1□□□□□ -0.47
CHEK1-205ENST00000498122 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
CHEK1-205ENST00000498122 HAX1O00165 279 aa12.09□□□□□ -0.47
CHEK1-205ENST00000498122 EIF4A2Q14240 407 aaKnown RBP12.09□□□□□ -0.47
CHEK1-205ENST00000498122 USHBP1Q8N6Y0 703 aa12.09□□□□□ -0.47
CHEK1-205ENST00000498122 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
CHEK1-205ENST00000498122 MTHFSP49914 203 aa12.08□□□□□ -0.48
CHEK1-205ENST00000498122 FAM182BQ5T319 152 aa12.08□□□□□ -0.48
CHEK1-205ENST00000498122 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
CHEK1-205ENST00000498122 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
CHEK1-205ENST00000498122 POLA2Q14181 598 aa12.06□□□□□ -0.48
CHEK1-205ENST00000498122 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
CHEK1-205ENST00000498122 EYA1Q99502 592 aa12.06□□□□□ -0.48
CHEK1-205ENST00000498122 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
CHEK1-205ENST00000498122 A0A0G2JS52 829 aa12.05□□□□□ -0.48
CHEK1-205ENST00000498122 IL13P35225 146 aa12.05□□□□□ -0.48
CHEK1-205ENST00000498122 MYT1Q01538 1121 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms