RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
NUDCD3-211ENST00000497978 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-211ENST00000497978 APBA3O96018 575 aa16.65■□□□□ 0.26
NUDCD3-211ENST00000497978 TRIM26Q12899 539 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-211ENST00000497978 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
NUDCD3-211ENST00000497978 SOX12O15370 315 aa16.64■□□□□ 0.25
NUDCD3-211ENST00000497978 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
NUDCD3-211ENST00000497978 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
NUDCD3-211ENST00000497978 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
NUDCD3-211ENST00000497978 HDGFL2Q7Z4V5 671 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-211ENST00000497978 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
NUDCD3-211ENST00000497978 PARP4Q9UKK3 1724 aaKnown RBP16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 COL18A1P39060 1754 aa16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 CSB-PGBD3P0DP91 1061 aa16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 CAMKK2Q96RR4 588 aa16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 AXIN2Q9Y2T1 843 aa16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
NUDCD3-211ENST00000497978 DDB1Q16531 1140 aa16.61■□□□□ 0.25
NUDCD3-211ENST00000497978 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
NUDCD3-211ENST00000497978 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
NUDCD3-211ENST00000497978 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
NUDCD3-211ENST00000497978 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
NUDCD3-211ENST00000497978 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 OVOS2A0A0J9YW53 1432 aa16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 OVOS2Q6IE36 1432 aa16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 LRP5O75197 1615 aa16.59■□□□□ 0.25
NUDCD3-211ENST00000497978 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
NUDCD3-211ENST00000497978 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
NUDCD3-211ENST00000497978 USP31Q70CQ4 1352 aa16.58■□□□□ 0.24
NUDCD3-211ENST00000497978 NFAT5O94916 1531 aa16.58■□□□□ 0.24
NUDCD3-211ENST00000497978 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
NUDCD3-211ENST00000497978 ABCC6O95255 1503 aa16.57■□□□□ 0.24
NUDCD3-211ENST00000497978 CD163L1Q9NR16 1453 aa16.57■□□□□ 0.24
NUDCD3-211ENST00000497978 NME9Q86XW9 330 aa16.57■□□□□ 0.24
NUDCD3-211ENST00000497978 LRRC37A3O60309 1634 aa16.56■□□□□ 0.24
NUDCD3-211ENST00000497978 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
NUDCD3-211ENST00000497978 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
NUDCD3-211ENST00000497978 SRCAPQ6ZRS2 3230 aa16.56■□□□□ 0.24
NUDCD3-211ENST00000497978 CCDC7Q96M83 1385 aa16.55■□□□□ 0.24
NUDCD3-211ENST00000497978 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
NUDCD3-211ENST00000497978 ST20-MTHFSA0A0A6YYL1 179 aa16.55■□□□□ 0.24
NUDCD3-211ENST00000497978 WNK3Q9BYP7 1800 aa16.54■□□□□ 0.24
NUDCD3-211ENST00000497978 A0A1W2PP64 1363 aa16.54■□□□□ 0.24
NUDCD3-211ENST00000497978 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
NUDCD3-211ENST00000497978 RREB1Q92766 1687 aa16.53■□□□□ 0.24
NUDCD3-211ENST00000497978 EXOC5O00471 708 aa16.53■□□□□ 0.24
NUDCD3-211ENST00000497978 TESK2Q96S53 571 aa16.53■□□□□ 0.24
NUDCD3-211ENST00000497978 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
NUDCD3-211ENST00000497978 MARCH10Q8NA82 808 aaPredicted RBP16.52■□□□□ 0.24
NUDCD3-211ENST00000497978 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
NUDCD3-211ENST00000497978 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
NUDCD3-211ENST00000497978 LTN1O94822 1766 aa16.51■□□□□ 0.23
NUDCD3-211ENST00000497978 NUP188Q5SRE5 1749 aa16.5■□□□□ 0.23
NUDCD3-211ENST00000497978 ERBB3P21860 1342 aa16.5■□□□□ 0.23
NUDCD3-211ENST00000497978 SBF2Q86WG5 1849 aa16.5■□□□□ 0.23
NUDCD3-211ENST00000497978 PLSCR1O15162 318 aa16.5■□□□□ 0.23
NUDCD3-211ENST00000497978 BCL9O00512 1426 aa16.5■□□□□ 0.23
NUDCD3-211ENST00000497978 TMF1P82094 1093 aa16.49■□□□□ 0.23
NUDCD3-211ENST00000497978 ANKRD24Q8TF21 1146 aa16.49■□□□□ 0.23
NUDCD3-211ENST00000497978 COG3Q96JB2 828 aa16.48■□□□□ 0.23
NUDCD3-211ENST00000497978 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
NUDCD3-211ENST00000497978 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
NUDCD3-211ENST00000497978 IL2RBP14784 551 aa16.47■□□□□ 0.23
NUDCD3-211ENST00000497978 USP47Q96K76 1375 aa16.47■□□□□ 0.23
NUDCD3-211ENST00000497978 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
NUDCD3-211ENST00000497978 MYCNP04198 464 aaPredicted RBP16.46■□□□□ 0.23
NUDCD3-211ENST00000497978 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
NUDCD3-211ENST00000497978 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
NUDCD3-211ENST00000497978 IP6K1Q92551 441 aa16.45■□□□□ 0.22
NUDCD3-211ENST00000497978 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
NUDCD3-211ENST00000497978 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
NUDCD3-211ENST00000497978 AMPHP49418 695 aa16.43■□□□□ 0.22
NUDCD3-211ENST00000497978 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
NUDCD3-211ENST00000497978 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
NUDCD3-211ENST00000497978 SPON1Q9HCB6 807 aa16.42■□□□□ 0.22
NUDCD3-211ENST00000497978 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
NUDCD3-211ENST00000497978 CLSPNQ9HAW4 1339 aa16.41■□□□□ 0.22
NUDCD3-211ENST00000497978 FAM208AQ9UK61 1670 aaKnown RBP16.4■□□□□ 0.22
NUDCD3-211ENST00000497978 KCNQ2O43526 872 aa16.4■□□□□ 0.22
NUDCD3-211ENST00000497978 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
NUDCD3-211ENST00000497978 ACSBG1Q96GR2 724 aa16.4■□□□□ 0.22
NUDCD3-211ENST00000497978 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
NUDCD3-211ENST00000497978 HOXC9P31274 260 aa16.39■□□□□ 0.21
NUDCD3-211ENST00000497978 PROM2Q8N271 834 aa16.39■□□□□ 0.21
NUDCD3-211ENST00000497978 PPP1R1BQ9UD71 204 aaPredicted RBP16.39■□□□□ 0.21
NUDCD3-211ENST00000497978 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
NUDCD3-211ENST00000497978 FYB1O15117 783 aa16.38■□□□□ 0.21
NUDCD3-211ENST00000497978 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
NUDCD3-211ENST00000497978 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
NUDCD3-211ENST00000497978 FBLN1P23142 703 aa16.37■□□□□ 0.21
NUDCD3-211ENST00000497978 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
NUDCD3-211ENST00000497978 KAT6BQ8WYB5 2073 aa16.37■□□□□ 0.21
NUDCD3-211ENST00000497978 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
NUDCD3-211ENST00000497978 DDX54Q8TDD1 881 aaKnown RBP16.36■□□□□ 0.21
NUDCD3-211ENST00000497978 RRS1Q15050 365 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-211ENST00000497978 SMG6Q86US8 1419 aaKnown RBP16.35■□□□□ 0.21
NUDCD3-211ENST00000497978 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms