RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 WWC3Q9ULE0 1092 aa21.72■■□□□ 1.07
RNF220-218ENST00000497469 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
RNF220-218ENST00000497469 WDR90Q96KV7 1748 aa21.7■■□□□ 1.06
RNF220-218ENST00000497469 SIRT1Q96EB6 747 aa21.7■■□□□ 1.06
RNF220-218ENST00000497469 KLRG1Q96E93 195 aa21.69■■□□□ 1.06
RNF220-218ENST00000497469 AATKQ6ZMQ8 1374 aa21.69■■□□□ 1.06
RNF220-218ENST00000497469 CRB1P82279 1406 aa21.69■■□□□ 1.06
RNF220-218ENST00000497469 RGL3Q3MIN7 710 aa21.68■■□□□ 1.06
RNF220-218ENST00000497469 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
RNF220-218ENST00000497469 PIK3C2GO75747 1445 aa21.67■■□□□ 1.06
RNF220-218ENST00000497469 JMYQ8N9B5 988 aa21.67■■□□□ 1.06
RNF220-218ENST00000497469 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
RNF220-218ENST00000497469 POGKQ9P215 609 aa21.64■■□□□ 1.05
RNF220-218ENST00000497469 BCL9O00512 1426 aa21.63■■□□□ 1.05
RNF220-218ENST00000497469 COL24A1Q17RW2 1714 aa21.63■■□□□ 1.05
RNF220-218ENST00000497469 TULP4Q9NRJ4 1543 aa21.63■■□□□ 1.05
RNF220-218ENST00000497469 CPDO75976 1380 aa21.62■■□□□ 1.05
RNF220-218ENST00000497469 PCNTO95613 3336 aa21.62■■□□□ 1.05
RNF220-218ENST00000497469 MINK1Q8N4C8 1332 aaPredicted RBP21.61■■□□□ 1.05
RNF220-218ENST00000497469 SLC16A10Q8TF71 515 aa21.61■■□□□ 1.05
RNF220-218ENST00000497469 ACSBG1Q96GR2 724 aa21.61■■□□□ 1.05
RNF220-218ENST00000497469 WNK3Q9BYP7 1800 aa21.61■■□□□ 1.05
RNF220-218ENST00000497469 PNPLA7Q6ZV29 1317 aa21.6■■□□□ 1.05
RNF220-218ENST00000497469 LRRC4BQ9NT99 713 aa21.6■■□□□ 1.05
RNF220-218ENST00000497469 TOMM70O94826 608 aa21.59■■□□□ 1.05
RNF220-218ENST00000497469 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
RNF220-218ENST00000497469 AKT1S1Q96B36 256 aa21.57■■□□□ 1.04
RNF220-218ENST00000497469 ANKRD30BQ9BXX2 1392 aa21.57■■□□□ 1.04
RNF220-218ENST00000497469 NHSQ6T4R5 1651 aa21.56■■□□□ 1.04
RNF220-218ENST00000497469 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
RNF220-218ENST00000497469 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
RNF220-218ENST00000497469 TUBGCP6Q96RT7 1819 aa21.55■■□□□ 1.04
RNF220-218ENST00000497469 LOC105371045A0A1W2PR82 267 aa21.54■■□□□ 1.04
RNF220-218ENST00000497469 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
RNF220-218ENST00000497469 HSPA1AP0DMV8 641 aaKnown RBP21.53■■□□□ 1.04
RNF220-218ENST00000497469 HSPA1BP0DMV9 641 aaKnown RBP21.53■■□□□ 1.04
RNF220-218ENST00000497469 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.04
RNF220-218ENST00000497469 WASLO00401 505 aaPredicted RBP21.52■■□□□ 1.04
RNF220-218ENST00000497469 MSL1Q68DK7 614 aa21.52■■□□□ 1.04
RNF220-218ENST00000497469 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
RNF220-218ENST00000497469 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
RNF220-218ENST00000497469 USP19O94966 1318 aa21.52■■□□□ 1.03
RNF220-218ENST00000497469 TFCP2L1Q9NZI6 479 aa21.51■■□□□ 1.03
RNF220-218ENST00000497469 SPATA31E1Q6ZUB1 1445 aa21.51■■□□□ 1.03
RNF220-218ENST00000497469 BRD4O60885 1362 aaPredicted RBP21.5■■□□□ 1.03
RNF220-218ENST00000497469 GCP02774 474 aa21.5■■□□□ 1.03
RNF220-218ENST00000497469 NMRK2Q9NPI5 230 aa21.5■■□□□ 1.03
RNF220-218ENST00000497469 TNS2Q63HR2 1409 aa21.49■■□□□ 1.03
RNF220-218ENST00000497469 KCNQ4P56696 695 aa21.49■■□□□ 1.03
RNF220-218ENST00000497469 BTAF1O14981 1849 aa21.49■■□□□ 1.03
RNF220-218ENST00000497469 MSH5O43196 834 aa21.47■■□□□ 1.03
RNF220-218ENST00000497469 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
RNF220-218ENST00000497469 USP6P35125 1406 aa21.46■■□□□ 1.03
RNF220-218ENST00000497469 EXOC5O00471 708 aa21.46■■□□□ 1.03
RNF220-218ENST00000497469 FAM161AQ3B820 660 aa21.46■■□□□ 1.03
RNF220-218ENST00000497469 ITSN1Q15811 1721 aa21.46■■□□□ 1.03
RNF220-218ENST00000497469 CDCA7Q9BWT1 371 aaPredicted RBP21.45■■□□□ 1.02
RNF220-218ENST00000497469 NUDT16Q96DE0 195 aaKnown RBP21.44■■□□□ 1.02
RNF220-218ENST00000497469 SLC4A1APQ9BWU0 796 aaKnown RBP21.44■■□□□ 1.02
RNF220-218ENST00000497469 WDR17Q8IZU2 1322 aa21.44■■□□□ 1.02
RNF220-218ENST00000497469 ACEP12821 1306 aa21.43■■□□□ 1.02
RNF220-218ENST00000497469 RBM46Q8TBY0 533 aaKnown RBP21.42■■□□□ 1.02
RNF220-218ENST00000497469 AXIN2Q9Y2T1 843 aa21.42■■□□□ 1.02
RNF220-218ENST00000497469 CD2APQ9Y5K6 639 aa21.41■■□□□ 1.02
RNF220-218ENST00000497469 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
RNF220-218ENST00000497469 NLRP13Q86W25 1043 aa21.39■■□□□ 1.01
RNF220-218ENST00000497469 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
RNF220-218ENST00000497469 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
RNF220-218ENST00000497469 CSB-PGBD3P0DP91 1061 aa21.37■■□□□ 1.01
RNF220-218ENST00000497469 COL23A1Q86Y22 540 aaPredicted RBP21.37■■□□□ 1.01
RNF220-218ENST00000497469 COL18A1P39060 1754 aa21.37■■□□□ 1.01
RNF220-218ENST00000497469 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
RNF220-218ENST00000497469 CARD10Q9BWT7 1032 aa21.35■■□□□ 1.01
RNF220-218ENST00000497469 TRPM1Q7Z4N2 1603 aa21.34■■□□□ 1.01
RNF220-218ENST00000497469 ADGRB1O14514 1584 aa21.34■■□□□ 1.01
RNF220-218ENST00000497469 ABCC6O95255 1503 aa21.34■■□□□ 1.01
RNF220-218ENST00000497469 FSTL1Q12841 308 aa21.33■■□□□ 1.01
RNF220-218ENST00000497469 CICQ96RK0 1608 aaPredicted RBP21.32■■□□□ 1
RNF220-218ENST00000497469 PPIP5K1Q6PFW1 1433 aa21.31■■□□□ 1
RNF220-218ENST00000497469 RGPD5Q99666 1765 aa21.31■■□□□ 1
RNF220-218ENST00000497469 SLIT3O75094 1523 aa21.29■■□□□ 1
RNF220-218ENST00000497469 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
RNF220-218ENST00000497469 CPSF1Q10570 1443 aaKnown RBP21.28■■□□□ 1
RNF220-218ENST00000497469 PIK3C2AO00443 1686 aa21.28■■□□□ 1
RNF220-218ENST00000497469 NLRP6P59044 892 aa21.27■■□□□ 1
RNF220-218ENST00000497469 CDK19Q9BWU1 502 aa21.27■■□□□ 1
RNF220-218ENST00000497469 CCDC7Q96M83 1385 aa21.25■□□□□ 0.99
RNF220-218ENST00000497469 SOX12O15370 315 aa21.25■□□□□ 0.99
RNF220-218ENST00000497469 PLEKHG3A1L390 1219 aa21.24■□□□□ 0.99
RNF220-218ENST00000497469 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
RNF220-218ENST00000497469 KCPQ6ZWJ8 1503 aa21.23■□□□□ 0.99
RNF220-218ENST00000497469 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
RNF220-218ENST00000497469 CCNL1Q9UK58 526 aaPredicted RBP21.21■□□□□ 0.99
RNF220-218ENST00000497469 LY75O60449 1722 aa21.19■□□□□ 0.98
RNF220-218ENST00000497469 FOXN1O15353 648 aa21.19■□□□□ 0.98
RNF220-218ENST00000497469 RRAGCQ9HB90 399 aa21.19■□□□□ 0.98
RNF220-218ENST00000497469 ARHGAP27Q6ZUM4 889 aa21.18■□□□□ 0.98
RNF220-218ENST00000497469 ARHGEF25Q86VW2 580 aa21.18■□□□□ 0.98
RNF220-218ENST00000497469 SMC1BQ8NDV3 1235 aa21.18■□□□□ 0.98
RNF220-218ENST00000497469 MLLT1Q03111 559 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms