RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 MYO15BQ96JP2 1530 aa10□□□□□ -0.81
GGPS1-208ENST00000497327 ZC3H4Q9UPT8 1303 aaKnown RBP10□□□□□ -0.81
GGPS1-208ENST00000497327 EPS8L1Q8TE68 723 aa9.99□□□□□ -0.81
GGPS1-208ENST00000497327 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
GGPS1-208ENST00000497327 CCDC116Q8IYX3 515 aa9.98□□□□□ -0.81
GGPS1-208ENST00000497327 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
GGPS1-208ENST00000497327 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
GGPS1-208ENST00000497327 USP17L8P0C7I0 530 aa9.97□□□□□ -0.81
GGPS1-208ENST00000497327 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
GGPS1-208ENST00000497327 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
GGPS1-208ENST00000497327 GMPRP36959 345 aa9.96□□□□□ -0.82
GGPS1-208ENST00000497327 RFC5P40937 340 aa9.96□□□□□ -0.82
GGPS1-208ENST00000497327 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
GGPS1-208ENST00000497327 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
GGPS1-208ENST00000497327 GOPCQ9HD26 462 aa9.95□□□□□ -0.82
GGPS1-208ENST00000497327 ATP1B4Q9UN42 357 aaPredicted RBP9.95□□□□□ -0.82
GGPS1-208ENST00000497327 SOS2Q07890 1332 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-208ENST00000497327 BMP2P12643 396 aa9.94□□□□□ -0.82
GGPS1-208ENST00000497327 LORP23490 312 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-208ENST00000497327 IRF7Q92985 503 aa9.94□□□□□ -0.82
GGPS1-208ENST00000497327 SLC10A4Q96EP9 437 aa9.94□□□□□ -0.82
GGPS1-208ENST00000497327 KCTD15Q96SI1 283 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-208ENST00000497327 STK17AQ9UEE5 414 aa9.94□□□□□ -0.82
GGPS1-208ENST00000497327 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
GGPS1-208ENST00000497327 ZBTB33Q86T24 672 aa9.93□□□□□ -0.82
GGPS1-208ENST00000497327 CDV3Q9UKY7 258 aaKnown RBP9.93□□□□□ -0.82
GGPS1-208ENST00000497327 PTK2Q05397 1052 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 CBLBQ13191 982 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 INTS6LQ5JSJ4 861 aaKnown RBP9.92□□□□□ -0.82
GGPS1-208ENST00000497327 Q6ZVU0 165 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 ADAM32Q8TC27 787 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 TRIM34Q9BYJ4 488 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
GGPS1-208ENST00000497327 UPP2O95045 317 aa9.91□□□□□ -0.82
GGPS1-208ENST00000497327 TSEN34Q9BSV6 310 aaKnown RBP9.91□□□□□ -0.82
GGPS1-208ENST00000497327 NACADO15069 1562 aa9.9□□□□□ -0.82
GGPS1-208ENST00000497327 MAN1A2O60476 641 aa9.9□□□□□ -0.82
GGPS1-208ENST00000497327 VSIG8P0DPA2 414 aa9.9□□□□□ -0.82
GGPS1-208ENST00000497327 NEUROD2Q15784 382 aa9.9□□□□□ -0.82
GGPS1-208ENST00000497327 PGPEP1Q9NXJ5 209 aa9.9□□□□□ -0.82
GGPS1-208ENST00000497327 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
GGPS1-208ENST00000497327 BRPF1P55201 1214 aaPredicted RBP9.87□□□□□ -0.83
GGPS1-208ENST00000497327 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
GGPS1-208ENST00000497327 IL27Q8NEV9 243 aa9.87□□□□□ -0.83
GGPS1-208ENST00000497327 SPINT1O43278 529 aa9.86□□□□□ -0.83
GGPS1-208ENST00000497327 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
GGPS1-208ENST00000497327 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
GGPS1-208ENST00000497327 TTLL8A6PVC2 850 aa9.85□□□□□ -0.83
GGPS1-208ENST00000497327 TMEM259Q4ZIN3 620 aa9.85□□□□□ -0.83
GGPS1-208ENST00000497327 PNMA1Q8ND90 353 aa9.85□□□□□ -0.83
GGPS1-208ENST00000497327 ESPNB1AK53 854 aa9.84□□□□□ -0.83
GGPS1-208ENST00000497327 NBPF20Q3BBV1 942 aa9.84□□□□□ -0.83
GGPS1-208ENST00000497327 AGBL1Q96MI9 1066 aa9.84□□□□□ -0.83
GGPS1-208ENST00000497327 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
GGPS1-208ENST00000497327 LILRA1O75019 489 aa9.82□□□□□ -0.84
GGPS1-208ENST00000497327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.82□□□□□ -0.84
GGPS1-208ENST00000497327 ZSCAN1Q8NBB4 408 aa9.82□□□□□ -0.84
GGPS1-208ENST00000497327 ZNF784Q8NCA9 323 aaPredicted RBP9.82□□□□□ -0.84
GGPS1-208ENST00000497327 SHROOM4Q9ULL8 1493 aa9.81□□□□□ -0.84
GGPS1-208ENST00000497327 FIGNL2A6NMB9 653 aa9.81□□□□□ -0.84
GGPS1-208ENST00000497327 ERVH48-1M5A8F1 160 aa9.81□□□□□ -0.84
GGPS1-208ENST00000497327 DZIP3Q86Y13 1208 aaKnown RBP9.81□□□□□ -0.84
GGPS1-208ENST00000497327 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
GGPS1-208ENST00000497327 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
GGPS1-208ENST00000497327 CTSOP43234 321 aaPredicted RBP9.8□□□□□ -0.84
GGPS1-208ENST00000497327 RAB15P59190 212 aa9.8□□□□□ -0.84
GGPS1-208ENST00000497327 RELBQ01201 579 aa9.8□□□□□ -0.84
GGPS1-208ENST00000497327 PTSQ03393 145 aa9.8□□□□□ -0.84
GGPS1-208ENST00000497327 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
GGPS1-208ENST00000497327 GPR37L1O60883 481 aa9.79□□□□□ -0.84
GGPS1-208ENST00000497327 ZBBXA8MT70 800 aa9.78□□□□□ -0.84
GGPS1-208ENST00000497327 FBXO45P0C2W1 286 aa9.78□□□□□ -0.84
GGPS1-208ENST00000497327 INSM2Q96T92 566 aaPredicted RBP9.78□□□□□ -0.84
GGPS1-208ENST00000497327 ADH1AP07327 375 aa9.77□□□□□ -0.85
GGPS1-208ENST00000497327 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
GGPS1-208ENST00000497327 GPR161Q8N6U8 529 aaKnown RBP9.76□□□□□ -0.85
GGPS1-208ENST00000497327 RNF217Q8TC41 542 aa9.76□□□□□ -0.85
GGPS1-208ENST00000497327 ZNF395Q9H8N7 513 aaPredicted RBP9.76□□□□□ -0.85
GGPS1-208ENST00000497327 KRT76Q01546 638 aa9.75□□□□□ -0.85
GGPS1-208ENST00000497327 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
GGPS1-208ENST00000497327 CCDC155Q8N6L0 562 aa9.75□□□□□ -0.85
GGPS1-208ENST00000497327 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
GGPS1-208ENST00000497327 FOXD4L5Q5VV16 416 aaPredicted RBP9.74□□□□□ -0.85
GGPS1-208ENST00000497327 MTMR14Q8NCE2 650 aa9.74□□□□□ -0.85
GGPS1-208ENST00000497327 SOCS7O14512 581 aa9.73□□□□□ -0.85
GGPS1-208ENST00000497327 PTGIRP43119 386 aa9.73□□□□□ -0.85
GGPS1-208ENST00000497327 BANK1Q8NDB2 785 aa9.73□□□□□ -0.85
GGPS1-208ENST00000497327 NANOS1Q8WY41 292 aaKnown RBP9.73□□□□□ -0.85
GGPS1-208ENST00000497327 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
GGPS1-208ENST00000497327 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
GGPS1-208ENST00000497327 PCDHB9Q9Y5E1 797 aa9.73□□□□□ -0.85
GGPS1-208ENST00000497327 FAM181BA6NEQ2 426 aa9.72□□□□□ -0.85
GGPS1-208ENST00000497327 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.86
GGPS1-208ENST00000497327 NR1H3Q13133 447 aa9.7□□□□□ -0.86
GGPS1-208ENST00000497327 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
GGPS1-208ENST00000497327 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
GGPS1-208ENST00000497327 ITGA6P23229 1130 aa9.69□□□□□ -0.86
GGPS1-208ENST00000497327 SCRIBQ14160 1630 aa9.69□□□□□ -0.86
GGPS1-208ENST00000497327 RNFT1Q5M7Z0 435 aa9.68□□□□□ -0.86
GGPS1-208ENST00000497327 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms