RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 PRR20BP86481 221 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 PRR20AP86496 221 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 EHBP1Q8NDI1 1231 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 PDZRN3Q9UPQ7 1066 aa9.18□□□□□ -0.94
VPS36-206ENST00000497149 LCE2BO14633 110 aa9.17□□□□□ -0.94
VPS36-206ENST00000497149 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
VPS36-206ENST00000497149 RFX1P22670 979 aa9.17□□□□□ -0.94
VPS36-206ENST00000497149 LMOD1P29536 600 aaPredicted RBP9.17□□□□□ -0.94
VPS36-206ENST00000497149 SPRYD7Q5W111 196 aa9.17□□□□□ -0.94
VPS36-206ENST00000497149 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
VPS36-206ENST00000497149 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
VPS36-206ENST00000497149 MAFBQ9Y5Q3 323 aaPredicted RBP9.17□□□□□ -0.94
VPS36-206ENST00000497149 SKIP12755 728 aa9.16□□□□□ -0.94
VPS36-206ENST00000497149 ZNF598Q86UK7 904 aaKnown RBP9.16□□□□□ -0.94
VPS36-206ENST00000497149 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
VPS36-206ENST00000497149 WNT7AO00755 349 aa9.15□□□□□ -0.94
VPS36-206ENST00000497149 PPP1R15AO75807 674 aaPredicted RBP9.15□□□□□ -0.94
VPS36-206ENST00000497149 NBPF20Q3BBV1 942 aa9.15□□□□□ -0.94
VPS36-206ENST00000497149 CHIC2Q9UKJ5 165 aa9.15□□□□□ -0.94
VPS36-206ENST00000497149 ESPNB1AK53 854 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 SIAH2O43255 324 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 SRPK2P78362 688 aaKnown RBP9.14□□□□□ -0.95
VPS36-206ENST00000497149 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 TRIM67Q6ZTA4 783 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 CDK15Q96Q40 435 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 KCTD15Q96SI1 283 aaPredicted RBP9.14□□□□□ -0.95
VPS36-206ENST00000497149 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
VPS36-206ENST00000497149 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
VPS36-206ENST00000497149 MPNDQ8N594 471 aa9.13□□□□□ -0.95
VPS36-206ENST00000497149 PLPP7Q8NBV4 271 aa9.13□□□□□ -0.95
VPS36-206ENST00000497149 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
VPS36-206ENST00000497149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.12□□□□□ -0.95
VPS36-206ENST00000497149 USP17L5A8MUK1 530 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 ARID5BQ14865 1188 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 MAP7D1Q3KQU3 841 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 ZNF697Q5TEC3 545 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 PLEKHM2Q8IWE5 1019 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 MRGPRX2Q96LB1 330 aa9.12□□□□□ -0.95
VPS36-206ENST00000497149 CCDC85AQ96PX6 553 aaPredicted RBP9.12□□□□□ -0.95
VPS36-206ENST00000497149 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
VPS36-206ENST00000497149 USP17L3A6NCW0 530 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 USP17L4A6NCW7 530 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 LZTS3O60299 673 aaPredicted RBP9.11□□□□□ -0.95
VPS36-206ENST00000497149 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 USP17L1Q7RTZ2 530 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
VPS36-206ENST00000497149 GRM5P41594 1212 aa9.1□□□□□ -0.95
VPS36-206ENST00000497149 KANK4Q5T7N3 995 aaPredicted RBP9.1□□□□□ -0.95
VPS36-206ENST00000497149 DGAT1O75907 488 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 FOXC1Q12948 553 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 CDCA8Q53HL2 280 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 VRTNQ9H8Y1 702 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 PKD2L1Q9P0L9 805 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 DOLKQ9UPQ8 538 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 TLL2Q9Y6L7 1015 aa9.09□□□□□ -0.95
VPS36-206ENST00000497149 RAB15P59190 212 aa9.08□□□□□ -0.96
VPS36-206ENST00000497149 NCOA4Q13772 614 aa9.08□□□□□ -0.96
VPS36-206ENST00000497149 INTS6LQ5JSJ4 861 aaKnown RBP9.08□□□□□ -0.96
VPS36-206ENST00000497149 GDF9O60383 454 aa9.07□□□□□ -0.96
VPS36-206ENST00000497149 EML3Q32P44 896 aa9.07□□□□□ -0.96
VPS36-206ENST00000497149 CDCA7Q9BWT1 371 aaPredicted RBP9.07□□□□□ -0.96
VPS36-206ENST00000497149 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
VPS36-206ENST00000497149 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
VPS36-206ENST00000497149 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
VPS36-206ENST00000497149 ADH1CP00326 375 aa9.06□□□□□ -0.96
VPS36-206ENST00000497149 NR5A1Q13285 461 aa9.06□□□□□ -0.96
VPS36-206ENST00000497149 FSHRP23945 695 aa9.05□□□□□ -0.96
VPS36-206ENST00000497149 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
VPS36-206ENST00000497149 SNIP1Q8TAD8 396 aaKnown RBP9.05□□□□□ -0.96
VPS36-206ENST00000497149 ATP5J2-PTCD1G3V325 749 aa9.04□□□□□ -0.96
VPS36-206ENST00000497149 ATG7O95352 703 aa9.04□□□□□ -0.96
VPS36-206ENST00000497149 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
VPS36-206ENST00000497149 USP4Q13107 963 aa9.04□□□□□ -0.96
VPS36-206ENST00000497149 NOD1Q9Y239 953 aa9.04□□□□□ -0.96
VPS36-206ENST00000497149 DHX9Q08211 1270 aaKnown RBP9.03□□□□□ -0.96
VPS36-206ENST00000497149 PKDCCQ504Y2 493 aa9.03□□□□□ -0.96
VPS36-206ENST00000497149 SIRT1Q96EB6 747 aa9.03□□□□□ -0.96
VPS36-206ENST00000497149 NR3C2P08235 984 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 RASA1P20936 1047 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 TRIM50Q86XT4 487 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 RETREG2Q8NC44 543 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
VPS36-206ENST00000497149 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
VPS36-206ENST00000497149 PPP1R26Q5T8A7 1209 aaPredicted RBP9.01□□□□□ -0.97
VPS36-206ENST00000497149 LARP1Q6PKG0 1096 aaKnown RBP9.01□□□□□ -0.97
VPS36-206ENST00000497149 CYP4X1Q8N118 509 aa9.01□□□□□ -0.97
VPS36-206ENST00000497149 OGFOD1Q8N543 542 aa9.01□□□□□ -0.97
VPS36-206ENST00000497149 WASF2Q9Y6W5 498 aa9.01□□□□□ -0.97
VPS36-206ENST00000497149 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
VPS36-206ENST00000497149 FAM196BA6NMK8 535 aa9□□□□□ -0.97
VPS36-206ENST00000497149 SCTRP47872 440 aa9□□□□□ -0.97
VPS36-206ENST00000497149 ERVK-9P63128 1117 aa9□□□□□ -0.97
VPS36-206ENST00000497149 CLDN10P78369 228 aa9□□□□□ -0.97
VPS36-206ENST00000497149 PTK7Q13308 1070 aa9□□□□□ -0.97
VPS36-206ENST00000497149 ELOAQ14241 798 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms