RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 GCP02774 474 aa11.06□□□□□ -0.64
SRRM1-220ENST00000496882 DSG3P32926 999 aa11.06□□□□□ -0.64
SRRM1-220ENST00000496882 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
SRRM1-220ENST00000496882 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
SRRM1-220ENST00000496882 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
SRRM1-220ENST00000496882 CPDO75976 1380 aa11.05□□□□□ -0.64
SRRM1-220ENST00000496882 MIER1Q8N108 512 aa11.05□□□□□ -0.64
SRRM1-220ENST00000496882 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
SRRM1-220ENST00000496882 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
SRRM1-220ENST00000496882 TTC21AQ8NDW8 1320 aa11.05□□□□□ -0.64
SRRM1-220ENST00000496882 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
SRRM1-220ENST00000496882 BAG6P46379 1132 aa11.04□□□□□ -0.64
SRRM1-220ENST00000496882 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
SRRM1-220ENST00000496882 KCNH5Q8NCM2 988 aa11.04□□□□□ -0.64
SRRM1-220ENST00000496882 TMC1Q8TDI8 760 aa11.04□□□□□ -0.64
SRRM1-220ENST00000496882 TTC21BQ7Z4L5 1316 aa11.04□□□□□ -0.64
SRRM1-220ENST00000496882 SSH2Q76I76 1423 aa11.03□□□□□ -0.64
SRRM1-220ENST00000496882 BRWD3Q6RI45 1802 aa11.03□□□□□ -0.64
SRRM1-220ENST00000496882 PDE3BQ13370 1112 aa11.02□□□□□ -0.65
SRRM1-220ENST00000496882 TCP11L2Q8N4U5 519 aa11.02□□□□□ -0.65
SRRM1-220ENST00000496882 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
SRRM1-220ENST00000496882 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
SRRM1-220ENST00000496882 SOX12O15370 315 aa11.01□□□□□ -0.65
SRRM1-220ENST00000496882 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
SRRM1-220ENST00000496882 BARGINQ6ZT62 677 aa11.01□□□□□ -0.65
SRRM1-220ENST00000496882 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
SRRM1-220ENST00000496882 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
SRRM1-220ENST00000496882 SLIT3O75094 1523 aa11□□□□□ -0.65
SRRM1-220ENST00000496882 FAM196AQ6ZSG2 479 aa11□□□□□ -0.65
SRRM1-220ENST00000496882 TOM1L2Q6ZVM7 507 aa11□□□□□ -0.65
SRRM1-220ENST00000496882 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
SRRM1-220ENST00000496882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
SRRM1-220ENST00000496882 PUS7Q96PZ0 661 aaKnown RBP11□□□□□ -0.65
SRRM1-220ENST00000496882 CAMTA1Q9Y6Y1 1673 aa11□□□□□ -0.65
SRRM1-220ENST00000496882 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
SRRM1-220ENST00000496882 PIK3C2AO00443 1686 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 THSD7AQ9UPZ6 1657 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 EP400Q96L91 3159 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 CFAP44Q96MT7 982 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 PCGF6Q9BYE7 350 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 CRB1P82279 1406 aa10.99□□□□□ -0.65
SRRM1-220ENST00000496882 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
SRRM1-220ENST00000496882 LMO7Q8WWI1 1683 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 ST20-MTHFSA0A0A6YYL1 179 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 C11orf95C9JLR9 678 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-220ENST00000496882 RGL2O15211 777 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 FAM182BQ5T319 152 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 CLSPNQ9HAW4 1339 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 NINLQ9Y2I6 1382 aa10.98□□□□□ -0.65
SRRM1-220ENST00000496882 TMF1P82094 1093 aa10.97□□□□□ -0.65
SRRM1-220ENST00000496882 ARHGEF25Q86VW2 580 aa10.97□□□□□ -0.65
SRRM1-220ENST00000496882 SLC12A5Q9H2X9 1139 aa10.97□□□□□ -0.65
SRRM1-220ENST00000496882 TIMELESSQ9UNS1 1208 aa10.97□□□□□ -0.65
SRRM1-220ENST00000496882 EDC4Q6P2E9 1401 aaKnown RBP10.97□□□□□ -0.65
SRRM1-220ENST00000496882 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
SRRM1-220ENST00000496882 MON2Q7Z3U7 1717 aa10.96□□□□□ -0.65
SRRM1-220ENST00000496882 WDR17Q8IZU2 1322 aa10.96□□□□□ -0.65
SRRM1-220ENST00000496882 CDCA8Q53HL2 280 aa10.96□□□□□ -0.65
SRRM1-220ENST00000496882 CDCA7Q9BWT1 371 aaPredicted RBP10.96□□□□□ -0.65
SRRM1-220ENST00000496882 ZBTB47Q9UFB7 747 aaPredicted RBP10.96□□□□□ -0.65
SRRM1-220ENST00000496882 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 USP31Q70CQ4 1352 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 USP47Q96K76 1375 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 TRIM37O94972 964 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
SRRM1-220ENST00000496882 DDB1Q16531 1140 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 NME9Q86XW9 330 aa10.95□□□□□ -0.66
SRRM1-220ENST00000496882 APBA3O96018 575 aa10.94□□□□□ -0.66
SRRM1-220ENST00000496882 TESK2Q96S53 571 aa10.94□□□□□ -0.66
SRRM1-220ENST00000496882 CD163L1Q9NR16 1453 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 CCDC7Q96M83 1385 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 COG3Q96JB2 828 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 CIZ1Q9ULV3 898 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-220ENST00000496882 AXIN2Q9Y2T1 843 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 ABCC6O95255 1503 aa10.93□□□□□ -0.66
SRRM1-220ENST00000496882 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 OVOS2A0A0J9YW53 1432 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 OVOS2Q6IE36 1432 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 SPRYD3Q8NCJ5 442 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
SRRM1-220ENST00000496882 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 NFAT5O94916 1531 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 PARP4Q9UKK3 1724 aaKnown RBP10.92□□□□□ -0.66
SRRM1-220ENST00000496882 DISP2A7MBM2 1401 aa10.92□□□□□ -0.66
SRRM1-220ENST00000496882 ANKRD36BQ8N2N9 1353 aa10.91□□□□□ -0.66
SRRM1-220ENST00000496882 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
SRRM1-220ENST00000496882 EZH2Q15910 746 aaKnown RBP10.91□□□□□ -0.66
SRRM1-220ENST00000496882 NLRP2Q9NX02 1062 aa10.91□□□□□ -0.66
SRRM1-220ENST00000496882 COL18A1P39060 1754 aa10.9□□□□□ -0.66
SRRM1-220ENST00000496882 EXOC5O00471 708 aa10.9□□□□□ -0.66
SRRM1-220ENST00000496882 ERBB3P21860 1342 aa10.89□□□□□ -0.67
SRRM1-220ENST00000496882 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
SRRM1-220ENST00000496882 PSDA5PKW4 1024 aaPredicted RBP10.89□□□□□ -0.67
SRRM1-220ENST00000496882 AMPHP49418 695 aa10.89□□□□□ -0.67
SRRM1-220ENST00000496882 NBPF14Q5TI25 921 aa10.89□□□□□ -0.67
SRRM1-220ENST00000496882 ANKRD24Q8TF21 1146 aa10.89□□□□□ -0.67
SRRM1-220ENST00000496882 TNS1Q9HBL0 1735 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms