RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
LMNA-216ENST00000496738 HOXC9P31274 260 aa22.31■■□□□ 1.16
LMNA-216ENST00000496738 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
LMNA-216ENST00000496738 IQSEC2Q5JU85 1478 aa22.3■■□□□ 1.16
LMNA-216ENST00000496738 PLEKHF1Q96S99 279 aa22.29■■□□□ 1.16
LMNA-216ENST00000496738 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
LMNA-216ENST00000496738 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
LMNA-216ENST00000496738 CDCA7LQ96GN5 454 aa22.29■■□□□ 1.16
LMNA-216ENST00000496738 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
LMNA-216ENST00000496738 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
LMNA-216ENST00000496738 ROBO1Q9Y6N7 1651 aa22.28■■□□□ 1.16
LMNA-216ENST00000496738 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
LMNA-216ENST00000496738 MAPK8IP3Q9UPT6 1336 aa22.28■■□□□ 1.16
LMNA-216ENST00000496738 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
LMNA-216ENST00000496738 AEBP1Q8IUX7 1158 aa22.27■■□□□ 1.16
LMNA-216ENST00000496738 FCHSD2O94868 740 aa22.26■■□□□ 1.15
LMNA-216ENST00000496738 PHRF1Q9P1Y6 1649 aaKnown RBP22.26■■□□□ 1.15
LMNA-216ENST00000496738 ARHGEF10O15013 1369 aa22.26■■□□□ 1.15
LMNA-216ENST00000496738 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
LMNA-216ENST00000496738 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
LMNA-216ENST00000496738 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
LMNA-216ENST00000496738 ARHGEF25Q86VW2 580 aa22.24■■□□□ 1.15
LMNA-216ENST00000496738 RGPD1P0DJD0 1748 aa22.24■■□□□ 1.15
LMNA-216ENST00000496738 IP6K1Q92551 441 aa22.23■■□□□ 1.15
LMNA-216ENST00000496738 ZNF521Q96K83 1311 aa22.23■■□□□ 1.15
LMNA-216ENST00000496738 PHACTR3Q96KR7 559 aa22.23■■□□□ 1.15
LMNA-216ENST00000496738 CRYBG1Q9Y4K1 1723 aa22.22■■□□□ 1.15
LMNA-216ENST00000496738 PNNQ9H307 717 aaKnown RBP22.22■■□□□ 1.15
LMNA-216ENST00000496738 PIP4K2BP78356 416 aa22.21■■□□□ 1.15
LMNA-216ENST00000496738 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
LMNA-216ENST00000496738 EYA1Q99502 592 aa22.21■■□□□ 1.15
LMNA-216ENST00000496738 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
LMNA-216ENST00000496738 NEFMP07197 916 aa22.2■■□□□ 1.14
LMNA-216ENST00000496738 WWC1Q8IX03 1113 aa22.2■■□□□ 1.14
LMNA-216ENST00000496738 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
LMNA-216ENST00000496738 AXIN2Q9Y2T1 843 aa22.19■■□□□ 1.14
LMNA-216ENST00000496738 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
LMNA-216ENST00000496738 SPINK5Q9NQ38 1064 aaPredicted RBP22.18■■□□□ 1.14
LMNA-216ENST00000496738 CHRNA2Q15822 529 aa22.17■■□□□ 1.14
LMNA-216ENST00000496738 IGSF1Q8N6C5 1336 aa22.17■■□□□ 1.14
LMNA-216ENST00000496738 HAP1P54257 671 aaPredicted RBP22.17■■□□□ 1.14
LMNA-216ENST00000496738 RIPK4P57078 832 aa22.17■■□□□ 1.14
LMNA-216ENST00000496738 SUPT16HQ9Y5B9 1047 aaKnown RBP22.16■■□□□ 1.14
LMNA-216ENST00000496738 RGPD5Q99666 1765 aa22.16■■□□□ 1.14
LMNA-216ENST00000496738 TOM1O60784 492 aa22.16■■□□□ 1.14
LMNA-216ENST00000496738 NGEFQ8N5V2 710 aa22.16■■□□□ 1.14
LMNA-216ENST00000496738 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
LMNA-216ENST00000496738 KIAA0232Q92628 1395 aa22.15■■□□□ 1.14
LMNA-216ENST00000496738 UBAP1LF5GYI3 381 aa22.15■■□□□ 1.14
LMNA-216ENST00000496738 AHDC1Q5TGY3 1603 aaPredicted RBP22.14■■□□□ 1.14
LMNA-216ENST00000496738 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
LMNA-216ENST00000496738 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
LMNA-216ENST00000496738 TRIM35Q9UPQ4 493 aa22.14■■□□□ 1.13
LMNA-216ENST00000496738 RGPD2P0DJD1 1756 aa22.14■■□□□ 1.13
LMNA-216ENST00000496738 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
LMNA-216ENST00000496738 NFE2L2Q16236 605 aa22.13■■□□□ 1.13
LMNA-216ENST00000496738 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
LMNA-216ENST00000496738 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
LMNA-216ENST00000496738 SLFN5Q08AF3 891 aa22.12■■□□□ 1.13
LMNA-216ENST00000496738 CCDC27Q2M243 656 aa22.12■■□□□ 1.13
LMNA-216ENST00000496738 KDRP35968 1356 aa22.11■■□□□ 1.13
LMNA-216ENST00000496738 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
LMNA-216ENST00000496738 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
LMNA-216ENST00000496738 COL18A1P39060 1754 aa22.1■■□□□ 1.13
LMNA-216ENST00000496738 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
LMNA-216ENST00000496738 CPDO75976 1380 aa22.09■■□□□ 1.13
LMNA-216ENST00000496738 E9PSI1 815 aa22.08■■□□□ 1.13
LMNA-216ENST00000496738 THUMPD2Q9BTF0 503 aaKnown RBP22.08■■□□□ 1.13
LMNA-216ENST00000496738 ERBB3P21860 1342 aa22.08■■□□□ 1.13
LMNA-216ENST00000496738 DLG5Q8TDM6 1919 aa22.08■■□□□ 1.12
LMNA-216ENST00000496738 WDR63Q8IWG1 891 aa22.08■■□□□ 1.12
LMNA-216ENST00000496738 FAM83GA6ND36 823 aa22.07■■□□□ 1.12
LMNA-216ENST00000496738 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
LMNA-216ENST00000496738 NCBP3Q53F19 620 aaKnown RBP22.06■■□□□ 1.12
LMNA-216ENST00000496738 CERKQ8TCT0 537 aa22.06■■□□□ 1.12
LMNA-216ENST00000496738 CSB-PGBD3P0DP91 1061 aa22.06■■□□□ 1.12
LMNA-216ENST00000496738 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
LMNA-216ENST00000496738 TRMT2AQ8IZ69 625 aaKnown RBP22.05■■□□□ 1.12
LMNA-216ENST00000496738 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
LMNA-216ENST00000496738 DCTN1Q14203 1278 aa22.05■■□□□ 1.12
LMNA-216ENST00000496738 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
LMNA-216ENST00000496738 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
LMNA-216ENST00000496738 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
LMNA-216ENST00000496738 CAMTA1Q9Y6Y1 1673 aa22.02■■□□□ 1.11
LMNA-216ENST00000496738 ABCC6O95255 1503 aa22.01■■□□□ 1.11
LMNA-216ENST00000496738 LAS1LQ9Y4W2 734 aaKnown RBP22.01■■□□□ 1.11
LMNA-216ENST00000496738 NEFLP07196 543 aa22.01■■□□□ 1.11
LMNA-216ENST00000496738 FKBP8Q14318 412 aa22.01■■□□□ 1.11
LMNA-216ENST00000496738 COL22A1Q8NFW1 1626 aaPredicted RBP22■■□□□ 1.11
LMNA-216ENST00000496738 MCM10Q7L590 875 aa22■■□□□ 1.11
LMNA-216ENST00000496738 LMO7Q8WWI1 1683 aa22■■□□□ 1.11
LMNA-216ENST00000496738 LMOD3Q0VAK6 560 aa22■■□□□ 1.11
LMNA-216ENST00000496738 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
LMNA-216ENST00000496738 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
LMNA-216ENST00000496738 GAS2L2Q8NHY3 880 aa21.98■■□□□ 1.11
LMNA-216ENST00000496738 FANCIQ9NVI1 1328 aa21.98■■□□□ 1.11
LMNA-216ENST00000496738 STRN4Q9NRL3 753 aa21.98■■□□□ 1.11
LMNA-216ENST00000496738 COL5A2P05997 1499 aaPredicted RBP21.97■■□□□ 1.11
LMNA-216ENST00000496738 IL16Q14005 1332 aa21.96■■□□□ 1.11
LMNA-216ENST00000496738 NUTM2BA6NNL0 878 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms