RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 A0A1W2PP64 1363 aa17.45■□□□□ 0.38
CLDN12-213ENST00000496677 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
CLDN12-213ENST00000496677 SF3B2Q13435 895 aaKnown RBP17.45■□□□□ 0.38
CLDN12-213ENST00000496677 TERF2IPQ9NYB0 399 aa17.45■□□□□ 0.38
CLDN12-213ENST00000496677 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
CLDN12-213ENST00000496677 USP47Q96K76 1375 aa17.44■□□□□ 0.38
CLDN12-213ENST00000496677 WDR17Q8IZU2 1322 aa17.44■□□□□ 0.38
CLDN12-213ENST00000496677 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
CLDN12-213ENST00000496677 FAM196AQ6ZSG2 479 aa17.43■□□□□ 0.38
CLDN12-213ENST00000496677 SOX12O15370 315 aa17.42■□□□□ 0.38
CLDN12-213ENST00000496677 DISP2A7MBM2 1401 aa17.41■□□□□ 0.38
CLDN12-213ENST00000496677 BAG6P46379 1132 aa17.41■□□□□ 0.38
CLDN12-213ENST00000496677 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
CLDN12-213ENST00000496677 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
CLDN12-213ENST00000496677 ABCC6O95255 1503 aa17.41■□□□□ 0.38
CLDN12-213ENST00000496677 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
CLDN12-213ENST00000496677 RGPD5Q99666 1765 aa17.4■□□□□ 0.38
CLDN12-213ENST00000496677 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
CLDN12-213ENST00000496677 RGPD1P0DJD0 1748 aa17.4■□□□□ 0.38
CLDN12-213ENST00000496677 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.38
CLDN12-213ENST00000496677 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.38
CLDN12-213ENST00000496677 TNS1Q9HBL0 1735 aaKnown RBP17.39■□□□□ 0.37
CLDN12-213ENST00000496677 TRIM37O94972 964 aa17.39■□□□□ 0.37
CLDN12-213ENST00000496677 TMF1P82094 1093 aa17.39■□□□□ 0.37
CLDN12-213ENST00000496677 EN1Q05925 392 aaPredicted RBP17.39■□□□□ 0.37
CLDN12-213ENST00000496677 CAMKK2Q96RR4 588 aa17.37■□□□□ 0.37
CLDN12-213ENST00000496677 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
CLDN12-213ENST00000496677 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
CLDN12-213ENST00000496677 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
CLDN12-213ENST00000496677 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
CLDN12-213ENST00000496677 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
CLDN12-213ENST00000496677 ERBB3P21860 1342 aa17.34■□□□□ 0.37
CLDN12-213ENST00000496677 DDB1Q16531 1140 aa17.34■□□□□ 0.37
CLDN12-213ENST00000496677 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
CLDN12-213ENST00000496677 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
CLDN12-213ENST00000496677 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
CLDN12-213ENST00000496677 MARCH10Q8NA82 808 aaPredicted RBP17.33■□□□□ 0.36
CLDN12-213ENST00000496677 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.36
CLDN12-213ENST00000496677 LTN1O94822 1766 aa17.33■□□□□ 0.36
CLDN12-213ENST00000496677 CCDC7Q96M83 1385 aa17.32■□□□□ 0.36
CLDN12-213ENST00000496677 FYB1O15117 783 aa17.32■□□□□ 0.36
CLDN12-213ENST00000496677 APBA3O96018 575 aa17.32■□□□□ 0.36
CLDN12-213ENST00000496677 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
CLDN12-213ENST00000496677 IP6K1Q92551 441 aa17.32■□□□□ 0.36
CLDN12-213ENST00000496677 BCL9O00512 1426 aa17.31■□□□□ 0.36
CLDN12-213ENST00000496677 COG3Q96JB2 828 aa17.31■□□□□ 0.36
CLDN12-213ENST00000496677 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
CLDN12-213ENST00000496677 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
CLDN12-213ENST00000496677 PARD3Q8TEW0 1356 aa17.3■□□□□ 0.36
CLDN12-213ENST00000496677 FBLN1P23142 703 aa17.3■□□□□ 0.36
CLDN12-213ENST00000496677 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
CLDN12-213ENST00000496677 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
CLDN12-213ENST00000496677 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
CLDN12-213ENST00000496677 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
CLDN12-213ENST00000496677 EXOC5O00471 708 aa17.28■□□□□ 0.36
CLDN12-213ENST00000496677 PTF1AQ7RTS3 328 aa17.28■□□□□ 0.36
CLDN12-213ENST00000496677 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
CLDN12-213ENST00000496677 PSDA5PKW4 1024 aaPredicted RBP17.27■□□□□ 0.36
CLDN12-213ENST00000496677 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
CLDN12-213ENST00000496677 MYOM1P52179 1685 aa17.26■□□□□ 0.35
CLDN12-213ENST00000496677 HOXC9P31274 260 aa17.26■□□□□ 0.35
CLDN12-213ENST00000496677 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
CLDN12-213ENST00000496677 PLSCR1O15162 318 aa17.25■□□□□ 0.35
CLDN12-213ENST00000496677 RREB1Q92766 1687 aa17.25■□□□□ 0.35
CLDN12-213ENST00000496677 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
CLDN12-213ENST00000496677 IL2RBP14784 551 aa17.24■□□□□ 0.35
CLDN12-213ENST00000496677 R3HDM1Q15032 1099 aaKnown RBP17.24■□□□□ 0.35
CLDN12-213ENST00000496677 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
CLDN12-213ENST00000496677 AMPHP49418 695 aa17.22■□□□□ 0.35
CLDN12-213ENST00000496677 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLDN12-213ENST00000496677 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
CLDN12-213ENST00000496677 PROM2Q8N271 834 aa17.22■□□□□ 0.35
CLDN12-213ENST00000496677 NUP188Q5SRE5 1749 aa17.21■□□□□ 0.35
CLDN12-213ENST00000496677 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
CLDN12-213ENST00000496677 LTV1Q96GA3 475 aaPredicted RBP17.21■□□□□ 0.35
CLDN12-213ENST00000496677 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.34
CLDN12-213ENST00000496677 LRP5O75197 1615 aa17.2■□□□□ 0.34
CLDN12-213ENST00000496677 RGPD3A6NKT7 1758 aaPredicted RBP17.2■□□□□ 0.34
CLDN12-213ENST00000496677 RGPD4Q7Z3J3 1758 aa17.2■□□□□ 0.34
CLDN12-213ENST00000496677 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
CLDN12-213ENST00000496677 KCNQ2O43526 872 aa17.19■□□□□ 0.34
CLDN12-213ENST00000496677 KIF20BQ96Q89 1820 aa17.19■□□□□ 0.34
CLDN12-213ENST00000496677 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
CLDN12-213ENST00000496677 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
CLDN12-213ENST00000496677 NBPF6Q5VWK0 638 aa17.17■□□□□ 0.34
CLDN12-213ENST00000496677 NBPF4Q96M43 638 aa17.17■□□□□ 0.34
CLDN12-213ENST00000496677 INSRP06213 1382 aa17.16■□□□□ 0.34
CLDN12-213ENST00000496677 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
CLDN12-213ENST00000496677 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
CLDN12-213ENST00000496677 NHSQ6T4R5 1651 aa17.14■□□□□ 0.33
CLDN12-213ENST00000496677 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
CLDN12-213ENST00000496677 CGNL1Q0VF96 1302 aa17.14■□□□□ 0.33
CLDN12-213ENST00000496677 FLT4P35916 1363 aa17.14■□□□□ 0.33
CLDN12-213ENST00000496677 MEGF6O75095 1541 aa17.13■□□□□ 0.33
CLDN12-213ENST00000496677 TXNRD1Q16881 649 aa17.13■□□□□ 0.33
CLDN12-213ENST00000496677 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
CLDN12-213ENST00000496677 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
CLDN12-213ENST00000496677 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
CLDN12-213ENST00000496677 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
CLDN12-213ENST00000496677 PANK3Q9H999 370 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms