RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	CCDC192	P0DO97	292 aa		9.76	□□□□□ -0.85
CRNKL1-205	ENST00000496549	ANKRD7	Q92527	254 aa		9.76	□□□□□ -0.85
CRNKL1-205	ENST00000496549	LNPK	Q9C0E8	428 aa		9.76	□□□□□ -0.85
CRNKL1-205	ENST00000496549	SYNJ2	O15056	1496 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MMP14	P50281	582 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CCDC183	Q5T5S1	534 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	DZIP1L	Q8IYY4	767 aa	Known RBP	9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GTF3C6	Q969F1	213 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	BCL2L13	Q9BXK5	485 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MYO1C	O00159	1063 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MPHOSPH10	O00566	681 aa	Known RBP	9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	TTLL5	Q6EMB2	1281 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	RPAIN	Q86UA6	219 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	ANKRD45	Q5TZF3	282 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	IGF1R	P08069	1367 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CCDC144A	A2RUR9	1427 aa		9.75	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NKTR	P30414	1462 aa	Known RBP	9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	ERO1A	Q96HE7	468 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	LMBRD1	Q9NUN5	540 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GUCY2C	P25092	1073 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	JPH4	Q96JJ6	628 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MAGI1	Q96QZ7	1491 aa	Predicted RBP	9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	EIF3J	O75822	258 aa	Known RBP	9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	SLU7	O95391	586 aa	Known RBP	9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	DDX11	Q96FC9	970 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MRVI1	Q9Y6F6	885 aa		9.74	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CCDC171	Q6TFL3	1326 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	ZNF526	Q8TF50	670 aa	Predicted RBP	9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	ARHGEF11	O15085	1522 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CARMIL1	Q5VZK9	1371 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	MCM2	P49736	904 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NCBP1	Q09161	790 aa	Known RBP	9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NEK11	Q8NG66	645 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GAS2L2	Q8NHY3	880 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	BIVM-ERCC5	R4GMW8	1640 aa		9.73	□□□□□ -0.85
CRNKL1-205	ENST00000496549	BECN2	A8MW95	431 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	HCLS1	P14317	486 aa	Predicted RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	SYT10	Q6XYQ8	523 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	FBXO3	Q9UK99	471 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CCAR2	Q8N163	923 aa	Known RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	INTS3	Q68E01	1043 aa	Known RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	TULP2	O00295	520 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	BRPF1	P55201	1214 aa	Predicted RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GORAB	Q5T7V8	394 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NOL8	Q76FK4	1167 aa	Known RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CFAP53	Q96M91	514 aa		9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	RRP15	Q9Y3B9	282 aa	Known RBP	9.72	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GRIN2A	Q12879	1464 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	NEMF	O60524	1076 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	KDM4A	O75164	1064 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	PPP2R5A	Q15172	486 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	TICAM2	Q86XR7	235 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	GOLGA5	Q8TBA6	731 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	SPTLC3	Q9NUV7	552 aa		9.71	□□□□□ -0.85
CRNKL1-205	ENST00000496549	CYP2C19	P33261	490 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	GBP6	Q6ZN66	633 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CXorf56	Q9H5V9	222 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	TMEM63C	Q9P1W3	806 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CCDC196	A0A1B0GTZ2	297 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CCP110	O43303	1012 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CAPN2	P17655	700 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	NF2	P35240	595 aa		9.71	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	WDR33	Q9C0J8	1336 aa	Known RBP	9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	PBRM1	Q86U86	1689 aa		9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MICALL1	Q8N3F8	863 aa		9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	NAIP	Q13075	1403 aa		9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ARID4A	P29374	1257 aa	Predicted RBP	9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MAP2K1	Q02750	393 aa	Predicted RBP	9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MVP	Q14764	893 aa	Known RBP	9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ELF2	Q15723	593 aa		9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	KIAA1524	Q8TCG1	905 aa		9.7	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ABCA5	Q8WWZ7	1642 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MCTP2	Q6DN12	878 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	SUFU	Q9UMX1	484 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	DONSON	Q9NYP3	566 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	INSR	P06213	1382 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CTIF	O43310	598 aa	Known RBP	9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	E2F4	Q16254	413 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	FMNL3	Q8IVF7	1028 aa		9.69	□□□□□ -0.86
CRNKL1-205	ENST00000496549	RIMBP3C	A6NJZ7	1639 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	RIMBP3B	A6NNM3	1639 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	RIMBP3	Q9UFD9	1639 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ERCC4	Q92889	916 aa	Predicted RBP	9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	KIAA0754	O94854	1291 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CDR1	P51861	262 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	CCDC186	Q7Z3E2	898 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MAGEA9	P43362	315 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	PSEN1	P49768	467 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	DHX8	Q14562	1220 aa	Known RBP	9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	SART3	Q15020	963 aa	Known RBP	9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	PCDHB15	Q9Y5E8	787 aa		9.68	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ERLIN1	O75477	346 aa		9.67	□□□□□ -0.86
CRNKL1-205	ENST00000496549	MUM1L1	Q5H9M0	696 aa		9.67	□□□□□ -0.86
CRNKL1-205	ENST00000496549	PSMD1	Q99460	953 aa		9.67	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ZNF692	Q9BU19	519 aa	Predicted RBP	9.67	□□□□□ -0.86
CRNKL1-205	ENST00000496549	ATP2B1	P20020	1258 aa		9.67	□□□□□ -0.86

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