RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 PPP1R12BO60237 982 aaPredicted RBP9.64□□□□□ -0.87
NPHP1-211ENST00000496524 ANKS4BQ8N8V4 417 aa9.64□□□□□ -0.87
NPHP1-211ENST00000496524 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
NPHP1-211ENST00000496524 NSRP1Q9H0G5 558 aaKnown RBP9.64□□□□□ -0.87
NPHP1-211ENST00000496524 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC9Q9Y3X0 531 aaKnown RBP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 PAXBP1Q9Y5B6 917 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 BAZ1BQ9UIG0 1483 aaKnown RBP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 SFPQP23246 707 aaKnown RBP eCLIP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 GSTTP1A0A1W2PQM5 241 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 STK26Q9P289 416 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 ABCC9O60706 1549 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 CDKL5O76039 1030 aa9.63□□□□□ -0.87
NPHP1-211ENST00000496524 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
NPHP1-211ENST00000496524 FSD2A1L4K1 749 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 DNAJC21Q5F1R6 531 aaKnown RBP9.62□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
NPHP1-211ENST00000496524 KIF5BP33176 963 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 ME1P48163 572 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 PRIMPOLQ96LW4 560 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 USH1CQ9Y6N9 552 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 SH3BGRP55822 239 aaPredicted RBP9.62□□□□□ -0.87
NPHP1-211ENST00000496524 SARNPP82979 210 aaKnown RBP9.62□□□□□ -0.87
NPHP1-211ENST00000496524 NUP62CLQ9H1M0 184 aa9.62□□□□□ -0.87
NPHP1-211ENST00000496524 FIBPO43427 364 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 EIF5P55010 431 aaKnown RBP9.61□□□□□ -0.87
NPHP1-211ENST00000496524 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 TCHPQ9BT92 498 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 UBE4AQ14139 1066 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 RSRC1Q96IZ7 334 aaKnown RBP9.61□□□□□ -0.87
NPHP1-211ENST00000496524 A0A1B0GUA9 196 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 GSDMDP57764 484 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 CEP131Q9UPN4 1083 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC160A6NGH7 325 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 GTPBP4Q9BZE4 634 aaKnown RBP9.61□□□□□ -0.87
NPHP1-211ENST00000496524 UACAQ9BZF9 1416 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
NPHP1-211ENST00000496524 FAM184BQ9ULE4 1060 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 NEK4P51957 841 aa9.61□□□□□ -0.87
NPHP1-211ENST00000496524 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
NPHP1-211ENST00000496524 WASHC4Q2M389 1173 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 KIF4BQ2VIQ3 1234 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 CEP112Q8N8E3 955 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 HOMER2Q9NSB8 354 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
NPHP1-211ENST00000496524 PKD2Q13563 968 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 MAP3K11Q16584 847 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 FMN1Q68DA7 1419 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 K7ELQ4 463 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC158Q5M9N0 1113 aa9.6□□□□□ -0.87
NPHP1-211ENST00000496524 SUDS3Q9H7L9 328 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-211ENST00000496524 STMN4Q9H169 189 aaPredicted RBP9.6□□□□□ -0.87
NPHP1-211ENST00000496524 FERMT1Q9BQL6 677 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 CFAP100Q494V2 611 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 GCC1Q96CN9 775 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 FOSBP53539 338 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 FKBP15Q5T1M5 1219 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 KRT222Q8N1A0 295 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 CYP46A1Q9Y6A2 500 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 TSNARE1Q96NA8 513 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 ZMYND15Q9H091 742 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 GOPCQ9HD26 462 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 KIF4AO95239 1232 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 TNNT1P13805 278 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 RNF168Q8IYW5 571 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 LNPKQ9C0E8 428 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 PLIN1O60240 522 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 LMAN1P49257 510 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 MPHOSPH9Q99550 1183 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 CTAGE5O15320 804 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 TACC1O75410 805 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 IKQ13123 557 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 MIPOL1Q8TD10 442 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 BCL2L13Q9BXK5 485 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 HSF2BPO75031 334 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 URI1O94763 535 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 LIG1P18858 919 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 TTC31Q49AM3 519 aaPredicted RBP9.59□□□□□ -0.87
NPHP1-211ENST00000496524 CCDC155Q8N6L0 562 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 TTC14Q96N46 770 aa9.59□□□□□ -0.87
NPHP1-211ENST00000496524 LARP1Q6PKG0 1096 aaKnown RBP9.58□□□□□ -0.88
NPHP1-211ENST00000496524 CCDC110Q8TBZ0 833 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 EHBP1Q8NDI1 1231 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 WASF1Q92558 559 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 SPATA32Q96LK8 384 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 GNAI1P63096 354 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 SH2D4BQ5SQS7 431 aa9.58□□□□□ -0.88
NPHP1-211ENST00000496524 FEZ2Q9UHY8 353 aaPredicted RBP9.58□□□□□ -0.88
NPHP1-211ENST00000496524 CKAP4Q07065 602 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms