RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 DDB1Q16531 1140 aa15.46■□□□□ 0.07
RNF220-217ENST00000496262 KCNH5Q8NCM2 988 aa15.46■□□□□ 0.07
RNF220-217ENST00000496262 LRRC37A3O60309 1634 aa15.46■□□□□ 0.06
RNF220-217ENST00000496262 WDR17Q8IZU2 1322 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 OVOS2A0A0G2JMS6 1433 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 OVOS2A0A0J9YW53 1432 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 OVOS2Q6IE36 1432 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
RNF220-217ENST00000496262 COL18A1P39060 1754 aa15.44■□□□□ 0.06
RNF220-217ENST00000496262 NME9Q86XW9 330 aa15.43■□□□□ 0.06
RNF220-217ENST00000496262 SBNO2Q9Y2G9 1366 aa15.43■□□□□ 0.06
RNF220-217ENST00000496262 NFAT5O94916 1531 aa15.43■□□□□ 0.06
RNF220-217ENST00000496262 RREB1Q92766 1687 aa15.42■□□□□ 0.06
RNF220-217ENST00000496262 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
RNF220-217ENST00000496262 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
RNF220-217ENST00000496262 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
RNF220-217ENST00000496262 NBPF14Q5TI25 921 aa15.41■□□□□ 0.06
RNF220-217ENST00000496262 HDGFL2Q7Z4V5 671 aaPredicted RBP15.41■□□□□ 0.06
RNF220-217ENST00000496262 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
RNF220-217ENST00000496262 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
RNF220-217ENST00000496262 RGPD5Q99666 1765 aa15.4■□□□□ 0.06
RNF220-217ENST00000496262 PTF1AQ7RTS3 328 aa15.4■□□□□ 0.06
RNF220-217ENST00000496262 MARCH10Q8NA82 808 aaPredicted RBP15.4■□□□□ 0.06
RNF220-217ENST00000496262 WNK3Q9BYP7 1800 aa15.4■□□□□ 0.06
RNF220-217ENST00000496262 C11orf95C9JLR9 678 aaPredicted RBP15.39■□□□□ 0.05
RNF220-217ENST00000496262 CDCA7Q9BWT1 371 aaPredicted RBP15.39■□□□□ 0.05
RNF220-217ENST00000496262 CARD10Q9BWT7 1032 aa15.39■□□□□ 0.05
RNF220-217ENST00000496262 A0A1W2PP64 1363 aa15.38■□□□□ 0.05
RNF220-217ENST00000496262 NLRP2Q9NX02 1062 aa15.38■□□□□ 0.05
RNF220-217ENST00000496262 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
RNF220-217ENST00000496262 BCL11BQ9C0K0 894 aaPredicted RBP15.37■□□□□ 0.05
RNF220-217ENST00000496262 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
RNF220-217ENST00000496262 CCDC7Q96M83 1385 aa15.36■□□□□ 0.05
RNF220-217ENST00000496262 EDC4Q6P2E9 1401 aaKnown RBP15.36■□□□□ 0.05
RNF220-217ENST00000496262 EXOC5O00471 708 aa15.36■□□□□ 0.05
RNF220-217ENST00000496262 ABCC6O95255 1503 aa15.35■□□□□ 0.05
RNF220-217ENST00000496262 ST20-MTHFSA0A0A6YYL1 179 aa15.35■□□□□ 0.05
RNF220-217ENST00000496262 ERBB3P21860 1342 aa15.35■□□□□ 0.05
RNF220-217ENST00000496262 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
RNF220-217ENST00000496262 LTN1O94822 1766 aa15.34■□□□□ 0.05
RNF220-217ENST00000496262 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
RNF220-217ENST00000496262 SBF2Q86WG5 1849 aa15.33■□□□□ 0.05
RNF220-217ENST00000496262 PLSCR1O15162 318 aa15.33■□□□□ 0.04
RNF220-217ENST00000496262 ANO8Q9HCE9 1232 aaPredicted RBP15.33■□□□□ 0.04
RNF220-217ENST00000496262 USP54Q70EL1 1684 aa15.32■□□□□ 0.04
RNF220-217ENST00000496262 LTV1Q96GA3 475 aaPredicted RBP15.32■□□□□ 0.04
RNF220-217ENST00000496262 ACSBG1Q96GR2 724 aa15.32■□□□□ 0.04
RNF220-217ENST00000496262 TESK2Q96S53 571 aa15.32■□□□□ 0.04
RNF220-217ENST00000496262 PPP1R1BQ9UD71 204 aaPredicted RBP15.32■□□□□ 0.04
RNF220-217ENST00000496262 KCNQ2O43526 872 aa15.31■□□□□ 0.04
RNF220-217ENST00000496262 IL2RBP14784 551 aa15.31■□□□□ 0.04
RNF220-217ENST00000496262 RGPD3A6NKT7 1758 aaPredicted RBP15.3■□□□□ 0.04
RNF220-217ENST00000496262 BCL9O00512 1426 aa15.3■□□□□ 0.04
RNF220-217ENST00000496262 RGPD4Q7Z3J3 1758 aa15.3■□□□□ 0.04
RNF220-217ENST00000496262 PROM2Q8N271 834 aa15.3■□□□□ 0.04
RNF220-217ENST00000496262 SPON1Q9HCB6 807 aa15.3■□□□□ 0.04
RNF220-217ENST00000496262 TXNRD1Q16881 649 aa15.29■□□□□ 0.04
RNF220-217ENST00000496262 COG3Q96JB2 828 aa15.29■□□□□ 0.04
RNF220-217ENST00000496262 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
RNF220-217ENST00000496262 FBLN1P23142 703 aa15.28■□□□□ 0.04
RNF220-217ENST00000496262 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
RNF220-217ENST00000496262 PUS7Q96PZ0 661 aaKnown RBP15.28■□□□□ 0.04
RNF220-217ENST00000496262 PDGFDQ9GZP0 370 aaPredicted RBP15.28■□□□□ 0.04
RNF220-217ENST00000496262 ZBTB7AO95365 584 aa15.27■□□□□ 0.04
RNF220-217ENST00000496262 STK32BQ9NY57 414 aa15.27■□□□□ 0.04
RNF220-217ENST00000496262 USP47Q96K76 1375 aa15.26■□□□□ 0.03
RNF220-217ENST00000496262 AMPHP49418 695 aa15.26■□□□□ 0.03
RNF220-217ENST00000496262 IP6K1Q92551 441 aa15.26■□□□□ 0.03
RNF220-217ENST00000496262 NHSQ6T4R5 1651 aa15.25■□□□□ 0.03
RNF220-217ENST00000496262 MAP3K19Q56UN5 1328 aa15.25■□□□□ 0.03
RNF220-217ENST00000496262 TMF1P82094 1093 aa15.25■□□□□ 0.03
RNF220-217ENST00000496262 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
RNF220-217ENST00000496262 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
RNF220-217ENST00000496262 HOXC9P31274 260 aa15.24■□□□□ 0.03
RNF220-217ENST00000496262 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
RNF220-217ENST00000496262 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
RNF220-217ENST00000496262 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
RNF220-217ENST00000496262 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
RNF220-217ENST00000496262 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
RNF220-217ENST00000496262 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
RNF220-217ENST00000496262 SYTL4Q96C24 671 aaPredicted RBP15.21■□□□□ 0.03
RNF220-217ENST00000496262 FAM208AQ9UK61 1670 aaKnown RBP15.2■□□□□ 0.02
RNF220-217ENST00000496262 USHBP1Q8N6Y0 703 aa15.2■□□□□ 0.02
RNF220-217ENST00000496262 BTAF1O14981 1849 aa15.2■□□□□ 0.02
RNF220-217ENST00000496262 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
RNF220-217ENST00000496262 FYB1O15117 783 aa15.19■□□□□ 0.02
RNF220-217ENST00000496262 MYOM1P52179 1685 aa15.19■□□□□ 0.02
RNF220-217ENST00000496262 MEGF6O75095 1541 aa15.18■□□□□ 0.02
RNF220-217ENST00000496262 PTGER2P43116 358 aa15.18■□□□□ 0.02
RNF220-217ENST00000496262 ZNF827Q17R98 1081 aa15.18■□□□□ 0.02
RNF220-217ENST00000496262 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
RNF220-217ENST00000496262 YY1P25490 414 aa15.17■□□□□ 0.02
RNF220-217ENST00000496262 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
RNF220-217ENST00000496262 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
RNF220-217ENST00000496262 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
RNF220-217ENST00000496262 LRRC4BQ9NT99 713 aa15.17■□□□□ 0.02
RNF220-217ENST00000496262 SMG6Q86US8 1419 aaKnown RBP15.17■□□□□ 0.02
RNF220-217ENST00000496262 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
RNF220-217ENST00000496262 PRIM1P49642 420 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms