RNA–Protein interactions for RNA: ENST00000495888.1

SPOCK2-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2, human

TSL 1 (best)

Gene SPOCK2, Length 694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK2-208	ENST00000495888	NLRP13	Q86W25	1043 aa		28.02	■■■□□ 2.08
SPOCK2-208	ENST00000495888	PLEKHG5	O94827	1062 aa		28.01	■■■□□ 2.07
SPOCK2-208	ENST00000495888	AATK	Q6ZMQ8	1374 aa		28	■■■□□ 2.07
SPOCK2-208	ENST00000495888	FAM83G	A6ND36	823 aa		28	■■■□□ 2.07
SPOCK2-208	ENST00000495888	NLRP6	P59044	892 aa		28	■■■□□ 2.07
SPOCK2-208	ENST00000495888	SEPT12	Q8IYM1	358 aa		28	■■■□□ 2.07
SPOCK2-208	ENST00000495888	COL14A1	Q05707	1796 aa	Known RBP	27.99	■■■□□ 2.07
SPOCK2-208	ENST00000495888	USP19	O94966	1318 aa		27.96	■■■□□ 2.07
SPOCK2-208	ENST00000495888	SLIT3	O75094	1523 aa		27.93	■■■□□ 2.06
SPOCK2-208	ENST00000495888	TNNT2	P45379	298 aa	Predicted RBP	27.93	■■■□□ 2.06
SPOCK2-208	ENST00000495888	CCDC9	Q9Y3X0	531 aa	Known RBP	27.93	■■■□□ 2.06
SPOCK2-208	ENST00000495888	SMG6	Q86US8	1419 aa	Known RBP	27.92	■■■□□ 2.06
SPOCK2-208	ENST00000495888	NUTM2G	Q5VZR2	741 aa		27.92	■■■□□ 2.06
SPOCK2-208	ENST00000495888	BTG4	Q9NY30	223 aa		27.92	■■■□□ 2.06
SPOCK2-208	ENST00000495888	KRT27	Q7Z3Y8	459 aa		27.9	■■■□□ 2.06
SPOCK2-208	ENST00000495888	KCNH5	Q8NCM2	988 aa		27.9	■■■□□ 2.06
SPOCK2-208	ENST00000495888	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.89	■■■□□ 2.06
SPOCK2-208	ENST00000495888	POLK	Q9UBT6	870 aa		27.89	■■■□□ 2.06
SPOCK2-208	ENST00000495888	NFAT5	O94916	1531 aa		27.88	■■■□□ 2.05
SPOCK2-208	ENST00000495888	MTHFS	P49914	203 aa		27.88	■■■□□ 2.05
SPOCK2-208	ENST00000495888	CCDC184	Q52MB2	194 aa		27.88	■■■□□ 2.05
SPOCK2-208	ENST00000495888	MRS2	Q9HD23	443 aa		27.88	■■■□□ 2.05
SPOCK2-208	ENST00000495888	INSR	P06213	1382 aa		27.86	■■■□□ 2.05
SPOCK2-208	ENST00000495888	DEFB132	Q7Z7B7	95 aa		27.86	■■■□□ 2.05
SPOCK2-208	ENST00000495888	THSD7A	Q9UPZ6	1657 aa		27.86	■■■□□ 2.05
SPOCK2-208	ENST00000495888	FAM98C	Q17RN3	349 aa	Known RBP	27.85	■■■□□ 2.05
SPOCK2-208	ENST00000495888	KIF24	Q5T7B8	1368 aa		27.85	■■■□□ 2.05
SPOCK2-208	ENST00000495888	GC	P02774	474 aa		27.84	■■■□□ 2.05
SPOCK2-208	ENST00000495888	SPATA31A5	Q5VU36	1347 aa		27.84	■■■□□ 2.05
SPOCK2-208	ENST00000495888	SPATA31A7	Q8IWB4	1347 aa		27.84	■■■□□ 2.05
SPOCK2-208	ENST00000495888	FBLN1	P23142	703 aa		27.83	■■■□□ 2.05
SPOCK2-208	ENST00000495888	MAP2	P11137	1827 aa	Known RBP	27.82	■■■□□ 2.04
SPOCK2-208	ENST00000495888	SF3B2	Q13435	895 aa	Known RBP	27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	RRS1	Q15050	365 aa	Known RBP	27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	CFAP53	Q96M91	514 aa		27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	PRDM11	Q9NQV5	511 aa		27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	EMILIN1	Q9Y6C2	1016 aa		27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	MAP3K19	Q56UN5	1328 aa		27.81	■■■□□ 2.04
SPOCK2-208	ENST00000495888	KIAA0232	Q92628	1395 aa		27.8	■■■□□ 2.04
SPOCK2-208	ENST00000495888	COL3A1	P02461	1466 aa	Predicted RBP	27.79	■■■□□ 2.04
SPOCK2-208	ENST00000495888		A0A0G2JS52	829 aa		27.79	■■■□□ 2.04
SPOCK2-208	ENST00000495888	MYT1	Q01538	1121 aa		27.79	■■■□□ 2.04
SPOCK2-208	ENST00000495888	PNISR	Q8TF01	805 aa	Known RBP	27.79	■■■□□ 2.04
SPOCK2-208	ENST00000495888	RTL1	A6NKG5	1358 aa		27.78	■■■□□ 2.04
SPOCK2-208	ENST00000495888	SOX12	O15370	315 aa		27.78	■■■□□ 2.04
SPOCK2-208	ENST00000495888	ARHGEF25	Q86VW2	580 aa		27.77	■■■□□ 2.04
SPOCK2-208	ENST00000495888	CPD	O75976	1380 aa		27.76	■■■□□ 2.03
SPOCK2-208	ENST00000495888	FLT4	P35916	1363 aa		27.76	■■■□□ 2.03
SPOCK2-208	ENST00000495888	RGPD1	P0DJD0	1748 aa		27.76	■■■□□ 2.03
SPOCK2-208	ENST00000495888	PEAK1	Q9H792	1746 aa		27.75	■■■□□ 2.03
SPOCK2-208	ENST00000495888	SPATA31A1	Q5TZJ5	1347 aa		27.74	■■■□□ 2.03
SPOCK2-208	ENST00000495888	PPM1G	O15355	546 aa	Predicted RBP	27.73	■■■□□ 2.03
SPOCK2-208	ENST00000495888	TNS1	Q9HBL0	1735 aa	Known RBP	27.72	■■■□□ 2.03
SPOCK2-208	ENST00000495888	ABCC6	O95255	1503 aa		27.72	■■■□□ 2.03
SPOCK2-208	ENST00000495888	LMO7	Q8WWI1	1683 aa		27.72	■■■□□ 2.03
SPOCK2-208	ENST00000495888	CHRNA2	Q15822	529 aa		27.72	■■■□□ 2.03
SPOCK2-208	ENST00000495888	IP6K1	Q92551	441 aa		27.72	■■■□□ 2.03
SPOCK2-208	ENST00000495888	HOXC9	P31274	260 aa		27.71	■■■□□ 2.03
SPOCK2-208	ENST00000495888	BAG6	P46379	1132 aa		27.71	■■■□□ 2.03
SPOCK2-208	ENST00000495888	AMPH	P49418	695 aa		27.71	■■■□□ 2.03
SPOCK2-208	ENST00000495888	LTN1	O94822	1766 aa		27.71	■■■□□ 2.03
SPOCK2-208	ENST00000495888	DISP2	A7MBM2	1401 aa		27.7	■■■□□ 2.03
SPOCK2-208	ENST00000495888	LRP5	O75197	1615 aa		27.7	■■■□□ 2.02
SPOCK2-208	ENST00000495888	DIAPH1	O60610	1272 aa	Known RBP	27.69	■■■□□ 2.02
SPOCK2-208	ENST00000495888	ZC3H6	P61129	1189 aa	Known RBP	27.69	■■■□□ 2.02
SPOCK2-208	ENST00000495888	FAM182B	Q5T319	152 aa		27.68	■■■□□ 2.02
SPOCK2-208	ENST00000495888	CAMTA1	Q9Y6Y1	1673 aa		27.68	■■■□□ 2.02
SPOCK2-208	ENST00000495888	HSP90AB2P	Q58FF8	381 aa		27.67	■■■□□ 2.02
SPOCK2-208	ENST00000495888	IL13	P35225	146 aa		27.66	■■■□□ 2.02
SPOCK2-208	ENST00000495888	NUDC	Q9Y266	331 aa		27.66	■■■□□ 2.02
SPOCK2-208	ENST00000495888	WDR43	Q15061	677 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
SPOCK2-208	ENST00000495888	STRN4	Q9NRL3	753 aa		27.65	■■■□□ 2.02
SPOCK2-208	ENST00000495888	COL18A1	P39060	1754 aa		27.63	■■■□□ 2.01
SPOCK2-208	ENST00000495888	EIF4A2	Q14240	407 aa	Known RBP	27.63	■■■□□ 2.01
SPOCK2-208	ENST00000495888	FAM9B	Q8IZU0	186 aa		27.63	■■■□□ 2.01
SPOCK2-208	ENST00000495888	EN1	Q05925	392 aa	Predicted RBP	27.62	■■■□□ 2.01
SPOCK2-208	ENST00000495888	BARGIN	Q6ZT62	677 aa		27.61	■■■□□ 2.01
SPOCK2-208	ENST00000495888	ADAMTS8	Q9UP79	889 aa		27.61	■■■□□ 2.01
SPOCK2-208	ENST00000495888	COL5A2	P05997	1499 aa	Predicted RBP	27.58	■■■□□ 2.01
SPOCK2-208	ENST00000495888	ZBTB7C	A1YPR0	619 aa		27.58	■■■□□ 2.01
SPOCK2-208	ENST00000495888	AXIN2	Q9Y2T1	843 aa		27.58	■■■□□ 2.01
SPOCK2-208	ENST00000495888	PSD	A5PKW4	1024 aa	Predicted RBP	27.57	■■■□□ 2
SPOCK2-208	ENST00000495888	LARP1	Q6PKG0	1096 aa	Known RBP	27.57	■■■□□ 2
SPOCK2-208	ENST00000495888	FAM196A	Q6ZSG2	479 aa		27.57	■■■□□ 2
SPOCK2-208	ENST00000495888	U2AF1L5	P0DN76	240 aa	Predicted RBP	27.56	■■■□□ 2
SPOCK2-208	ENST00000495888	EVA1C	P58658	441 aa		27.56	■■■□□ 2
SPOCK2-208	ENST00000495888	U2AF1	Q01081	240 aa	Known RBP eCLIP	27.56	■■■□□ 2
SPOCK2-208	ENST00000495888	USP35	Q9P2H5	1018 aa		27.56	■■■□□ 2
SPOCK2-208	ENST00000495888	U2SURP	O15042	1029 aa	Known RBP	27.55	■■■□□ 2
SPOCK2-208	ENST00000495888	PARP4	Q9UKK3	1724 aa	Known RBP	27.55	■■■□□ 2
SPOCK2-208	ENST00000495888	ERBB3	P21860	1342 aa		27.53	■■■□□ 2
SPOCK2-208	ENST00000495888	IGSF1	Q8N6C5	1336 aa		27.53	■■■□□ 2
SPOCK2-208	ENST00000495888	TCP11L2	Q8N4U5	519 aa		27.53	■■■□□ 2
SPOCK2-208	ENST00000495888	FCHSD2	O94868	740 aa		27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	TRIM37	O94972	964 aa		27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	EZH2	Q15910	746 aa	Known RBP	27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	ANKRD24	Q8TF21	1146 aa		27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	CAMKK2	Q96RR4	588 aa		27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	THRAP3	Q9Y2W1	955 aa	Known RBP	27.52	■■■□□ 2
SPOCK2-208	ENST00000495888	RREB1	Q92766	1687 aa		27.52	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms