RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 NFAT5O94916 1531 aa10.16□□□□□ -0.78
VPS52-221ENST00000495755 EDC4Q6P2E9 1401 aaKnown RBP10.16□□□□□ -0.78
VPS52-221ENST00000495755 A0A1W2PP64 1363 aa10.15□□□□□ -0.78
VPS52-221ENST00000495755 USP47Q96K76 1375 aa10.15□□□□□ -0.78
VPS52-221ENST00000495755 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
VPS52-221ENST00000495755 WDR17Q8IZU2 1322 aa10.15□□□□□ -0.78
VPS52-221ENST00000495755 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
VPS52-221ENST00000495755 BAG6P46379 1132 aa10.14□□□□□ -0.79
VPS52-221ENST00000495755 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
VPS52-221ENST00000495755 USP54Q70EL1 1684 aa10.14□□□□□ -0.79
VPS52-221ENST00000495755 TRIM37O94972 964 aa10.13□□□□□ -0.79
VPS52-221ENST00000495755 TMF1P82094 1093 aa10.13□□□□□ -0.79
VPS52-221ENST00000495755 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
VPS52-221ENST00000495755 CARD10Q9BWT7 1032 aa10.13□□□□□ -0.79
VPS52-221ENST00000495755 DISP2A7MBM2 1401 aa10.13□□□□□ -0.79
VPS52-221ENST00000495755 ABCC6O95255 1503 aa10.12□□□□□ -0.79
VPS52-221ENST00000495755 OVOS2A0A0J9YW53 1432 aa10.12□□□□□ -0.79
VPS52-221ENST00000495755 OVOS2Q6IE36 1432 aa10.12□□□□□ -0.79
VPS52-221ENST00000495755 RGPD1P0DJD0 1748 aa10.12□□□□□ -0.79
VPS52-221ENST00000495755 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
VPS52-221ENST00000495755 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
VPS52-221ENST00000495755 CAMKK2Q96RR4 588 aa10.11□□□□□ -0.79
VPS52-221ENST00000495755 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
VPS52-221ENST00000495755 ANKRD36BQ8N2N9 1353 aa10.11□□□□□ -0.79
VPS52-221ENST00000495755 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
VPS52-221ENST00000495755 C11orf95C9JLR9 678 aaPredicted RBP10.1□□□□□ -0.79
VPS52-221ENST00000495755 APBA3O96018 575 aa10.1□□□□□ -0.79
VPS52-221ENST00000495755 EZH2Q15910 746 aaKnown RBP10.1□□□□□ -0.79
VPS52-221ENST00000495755 DDB1Q16531 1140 aa10.1□□□□□ -0.79
VPS52-221ENST00000495755 CDCA8Q53HL2 280 aa10.1□□□□□ -0.79
VPS52-221ENST00000495755 RGPD5Q99666 1765 aa10.1□□□□□ -0.79
VPS52-221ENST00000495755 ERBB3P21860 1342 aa10.09□□□□□ -0.79
VPS52-221ENST00000495755 MARCH10Q8NA82 808 aaPredicted RBP10.09□□□□□ -0.79
VPS52-221ENST00000495755 IP6K1Q92551 441 aa10.09□□□□□ -0.79
VPS52-221ENST00000495755 COG3Q96JB2 828 aa10.09□□□□□ -0.79
VPS52-221ENST00000495755 CCDC7Q96M83 1385 aa10.09□□□□□ -0.79
VPS52-221ENST00000495755 LRRC37A3O60309 1634 aa10.08□□□□□ -0.8
VPS52-221ENST00000495755 PEAK1Q9H792 1746 aa10.08□□□□□ -0.8
VPS52-221ENST00000495755 FYB1O15117 783 aa10.08□□□□□ -0.8
VPS52-221ENST00000495755 CCER1Q8TC90 406 aaPredicted RBP10.08□□□□□ -0.8
VPS52-221ENST00000495755 ANKRD24Q8TF21 1146 aa10.08□□□□□ -0.8
VPS52-221ENST00000495755 PARD3Q8TEW0 1356 aa10.08□□□□□ -0.8
VPS52-221ENST00000495755 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
VPS52-221ENST00000495755 BCL9O00512 1426 aa10.07□□□□□ -0.8
VPS52-221ENST00000495755 EXOC5O00471 708 aa10.07□□□□□ -0.8
VPS52-221ENST00000495755 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
VPS52-221ENST00000495755 MAP3K19Q56UN5 1328 aa10.07□□□□□ -0.8
VPS52-221ENST00000495755 LTN1O94822 1766 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 WNK3Q9BYP7 1800 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
VPS52-221ENST00000495755 FBLN1P23142 703 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 HOXC9P31274 260 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 CARD14Q9BXL6 1004 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 BCL11BQ9C0K0 894 aaPredicted RBP10.06□□□□□ -0.8
VPS52-221ENST00000495755 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
VPS52-221ENST00000495755 PLSCR1O15162 318 aa10.05□□□□□ -0.8
VPS52-221ENST00000495755 IL2RBP14784 551 aa10.05□□□□□ -0.8
VPS52-221ENST00000495755 R3HDM1Q15032 1099 aaKnown RBP10.05□□□□□ -0.8
VPS52-221ENST00000495755 PTF1AQ7RTS3 328 aa10.05□□□□□ -0.8
VPS52-221ENST00000495755 AMPHP49418 695 aa10.04□□□□□ -0.8
VPS52-221ENST00000495755 TNS2Q63HR2 1409 aa10.04□□□□□ -0.8
VPS52-221ENST00000495755 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
VPS52-221ENST00000495755 HSPA5P11021 654 aaKnown RBP10.03□□□□□ -0.8
VPS52-221ENST00000495755 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
VPS52-221ENST00000495755 LTV1Q96GA3 475 aaPredicted RBP10.03□□□□□ -0.8
VPS52-221ENST00000495755 RTL1A6NKG5 1358 aa10.02□□□□□ -0.8
VPS52-221ENST00000495755 RRS1Q15050 365 aaKnown RBP10.02□□□□□ -0.81
VPS52-221ENST00000495755 PROM2Q8N271 834 aa10.02□□□□□ -0.81
VPS52-221ENST00000495755 MYOM1P52179 1685 aa10.02□□□□□ -0.81
VPS52-221ENST00000495755 RREB1Q92766 1687 aa10.02□□□□□ -0.81
VPS52-221ENST00000495755 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
VPS52-221ENST00000495755 KCNQ2O43526 872 aa10.01□□□□□ -0.81
VPS52-221ENST00000495755 NBPF14Q5TI25 921 aa10.01□□□□□ -0.81
VPS52-221ENST00000495755 KIF24Q5T7B8 1368 aa10.01□□□□□ -0.81
VPS52-221ENST00000495755 NUP188Q5SRE5 1749 aa10□□□□□ -0.81
VPS52-221ENST00000495755 HSP90AB2PQ58FF8 381 aa10□□□□□ -0.81
VPS52-221ENST00000495755 NBPF6Q5VWK0 638 aa10□□□□□ -0.81
VPS52-221ENST00000495755 NBPF4Q96M43 638 aa10□□□□□ -0.81
VPS52-221ENST00000495755 LRP5O75197 1615 aa10□□□□□ -0.81
VPS52-221ENST00000495755 FAM208AQ9UK61 1670 aaKnown RBP9.99□□□□□ -0.81
VPS52-221ENST00000495755 RGPD3A6NKT7 1758 aaPredicted RBP9.99□□□□□ -0.81
VPS52-221ENST00000495755 RGPD4Q7Z3J3 1758 aa9.99□□□□□ -0.81
VPS52-221ENST00000495755 INSRP06213 1382 aa9.99□□□□□ -0.81
VPS52-221ENST00000495755 FLT4P35916 1363 aa9.99□□□□□ -0.81
VPS52-221ENST00000495755 KIF20BQ96Q89 1820 aa9.98□□□□□ -0.81
VPS52-221ENST00000495755 TXNRD1Q16881 649 aa9.98□□□□□ -0.81
VPS52-221ENST00000495755 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
VPS52-221ENST00000495755 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
VPS52-221ENST00000495755 POLR3GLQ9BT43 218 aa9.98□□□□□ -0.81
VPS52-221ENST00000495755 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
VPS52-221ENST00000495755 USHBP1Q8N6Y0 703 aa9.97□□□□□ -0.81
VPS52-221ENST00000495755 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
VPS52-221ENST00000495755 PANK3Q9H999 370 aa9.97□□□□□ -0.81
VPS52-221ENST00000495755 ANO8Q9HCE9 1232 aaPredicted RBP9.97□□□□□ -0.81
VPS52-221ENST00000495755 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
VPS52-221ENST00000495755 MEGF6O75095 1541 aa9.97□□□□□ -0.81
VPS52-221ENST00000495755 NHSQ6T4R5 1651 aa9.96□□□□□ -0.81
VPS52-221ENST00000495755 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.81
VPS52-221ENST00000495755 POLKQ9UBT6 870 aa9.96□□□□□ -0.82
VPS52-221ENST00000495755 WASHC2AQ641Q2 1341 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms