RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 AKAP12Q02952 1782 aa13.75□□□□□ -0.21
GARNL3-219ENST00000495172 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
GARNL3-219ENST00000495172 COL24A1Q17RW2 1714 aa13.74□□□□□ -0.21
GARNL3-219ENST00000495172 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
GARNL3-219ENST00000495172 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
GARNL3-219ENST00000495172 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
GARNL3-219ENST00000495172 POLD1P28340 1107 aa13.73□□□□□ -0.21
GARNL3-219ENST00000495172 ITGAEP38570 1179 aa13.73□□□□□ -0.21
GARNL3-219ENST00000495172 LRRC4BQ9NT99 713 aa13.73□□□□□ -0.21
GARNL3-219ENST00000495172 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
GARNL3-219ENST00000495172 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
GARNL3-219ENST00000495172 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
GARNL3-219ENST00000495172 THRAP3Q9Y2W1 955 aaKnown RBP13.72□□□□□ -0.21
GARNL3-219ENST00000495172 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
GARNL3-219ENST00000495172 KCNQ4P56696 695 aa13.71□□□□□ -0.21
GARNL3-219ENST00000495172 RGL3Q3MIN7 710 aa13.71□□□□□ -0.21
GARNL3-219ENST00000495172 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
GARNL3-219ENST00000495172 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
GARNL3-219ENST00000495172 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
GARNL3-219ENST00000495172 TNS2Q63HR2 1409 aa13.7□□□□□ -0.22
GARNL3-219ENST00000495172 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
GARNL3-219ENST00000495172 HSPA1AP0DMV8 641 aaKnown RBP13.69□□□□□ -0.22
GARNL3-219ENST00000495172 HSPA1BP0DMV9 641 aaKnown RBP13.69□□□□□ -0.22
GARNL3-219ENST00000495172 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
GARNL3-219ENST00000495172 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
GARNL3-219ENST00000495172 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
GARNL3-219ENST00000495172 CRB1P82279 1406 aa13.69□□□□□ -0.22
GARNL3-219ENST00000495172 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
GARNL3-219ENST00000495172 TOMM70O94826 608 aa13.68□□□□□ -0.22
GARNL3-219ENST00000495172 AATKQ6ZMQ8 1374 aa13.68□□□□□ -0.22
GARNL3-219ENST00000495172 MINK1Q8N4C8 1332 aaPredicted RBP13.67□□□□□ -0.22
GARNL3-219ENST00000495172 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
GARNL3-219ENST00000495172 ROCK1Q13464 1354 aa13.67□□□□□ -0.22
GARNL3-219ENST00000495172 BTAF1O14981 1849 aa13.66□□□□□ -0.22
GARNL3-219ENST00000495172 NHSQ6T4R5 1651 aa13.65□□□□□ -0.22
GARNL3-219ENST00000495172 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
GARNL3-219ENST00000495172 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
GARNL3-219ENST00000495172 POGKQ9P215 609 aa13.64□□□□□ -0.23
GARNL3-219ENST00000495172 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 TOM1L2Q6ZVM7 507 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 SLC16A10Q8TF71 515 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 BCL9O00512 1426 aa13.63□□□□□ -0.23
GARNL3-219ENST00000495172 CPDO75976 1380 aa13.62□□□□□ -0.23
GARNL3-219ENST00000495172 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
GARNL3-219ENST00000495172 APLP2Q06481 763 aa13.62□□□□□ -0.23
GARNL3-219ENST00000495172 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
GARNL3-219ENST00000495172 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
GARNL3-219ENST00000495172 GCP02774 474 aa13.59□□□□□ -0.23
GARNL3-219ENST00000495172 ABTB2Q8N961 1025 aa13.59□□□□□ -0.23
GARNL3-219ENST00000495172 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
GARNL3-219ENST00000495172 RGPD5Q99666 1765 aa13.58□□□□□ -0.23
GARNL3-219ENST00000495172 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
GARNL3-219ENST00000495172 USP19O94966 1318 aa13.58□□□□□ -0.24
GARNL3-219ENST00000495172 USP6P35125 1406 aa13.57□□□□□ -0.24
GARNL3-219ENST00000495172 WASLO00401 505 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-219ENST00000495172 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-219ENST00000495172 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
GARNL3-219ENST00000495172 IGSF1Q8N6C5 1336 aa13.57□□□□□ -0.24
GARNL3-219ENST00000495172 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
GARNL3-219ENST00000495172 RBM46Q8TBY0 533 aaKnown RBP13.56□□□□□ -0.24
GARNL3-219ENST00000495172 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
GARNL3-219ENST00000495172 SPATA31E1Q6ZUB1 1445 aa13.56□□□□□ -0.24
GARNL3-219ENST00000495172 COL18A1P39060 1754 aa13.55□□□□□ -0.24
GARNL3-219ENST00000495172 EXOC5O00471 708 aa13.55□□□□□ -0.24
GARNL3-219ENST00000495172 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
GARNL3-219ENST00000495172 ACEP12821 1306 aa13.55□□□□□ -0.24
GARNL3-219ENST00000495172 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
GARNL3-219ENST00000495172 TNRC18O15417 2968 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-219ENST00000495172 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
GARNL3-219ENST00000495172 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
GARNL3-219ENST00000495172 WDR17Q8IZU2 1322 aa13.53□□□□□ -0.24
GARNL3-219ENST00000495172 ANKRD30BQ9BXX2 1392 aa13.53□□□□□ -0.24
GARNL3-219ENST00000495172 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
GARNL3-219ENST00000495172 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
GARNL3-219ENST00000495172 FOXN1O15353 648 aa13.5□□□□□ -0.25
GARNL3-219ENST00000495172 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
GARNL3-219ENST00000495172 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
GARNL3-219ENST00000495172 CICQ96RK0 1608 aaPredicted RBP13.49□□□□□ -0.25
GARNL3-219ENST00000495172 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
GARNL3-219ENST00000495172 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
GARNL3-219ENST00000495172 KIAA1210Q9ULL0 1709 aa13.48□□□□□ -0.25
GARNL3-219ENST00000495172 SOX12O15370 315 aa13.48□□□□□ -0.25
GARNL3-219ENST00000495172 KCNA4P22459 653 aa13.48□□□□□ -0.25
GARNL3-219ENST00000495172 FSTL1Q12841 308 aa13.48□□□□□ -0.25
GARNL3-219ENST00000495172 CDCA7Q9BWT1 371 aaPredicted RBP13.48□□□□□ -0.25
GARNL3-219ENST00000495172 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
GARNL3-219ENST00000495172 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
GARNL3-219ENST00000495172 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
GARNL3-219ENST00000495172 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
GARNL3-219ENST00000495172 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
GARNL3-219ENST00000495172 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
GARNL3-219ENST00000495172 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
GARNL3-219ENST00000495172 ADGRB1O14514 1584 aa13.45□□□□□ -0.26
GARNL3-219ENST00000495172 ABCC6O95255 1503 aa13.45□□□□□ -0.26
GARNL3-219ENST00000495172 PPIP5K1Q6PFW1 1433 aa13.45□□□□□ -0.26
GARNL3-219ENST00000495172 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
GARNL3-219ENST00000495172 LY75O60449 1722 aa13.44□□□□□ -0.26
GARNL3-219ENST00000495172 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms