RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 AMPHP49418 695 aa14.64□□□□□ -0.07
PKP4-215ENST00000494945 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
PKP4-215ENST00000494945 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
PKP4-215ENST00000494945 TOM1O60784 492 aa14.63□□□□□ -0.07
PKP4-215ENST00000494945 GCP02774 474 aa14.63□□□□□ -0.07
PKP4-215ENST00000494945 PNNQ9H307 717 aaKnown RBP14.63□□□□□ -0.07
PKP4-215ENST00000494945 NGEFQ8N5V2 710 aa14.62□□□□□ -0.07
PKP4-215ENST00000494945 RUNDC1Q96C34 613 aa14.62□□□□□ -0.07
PKP4-215ENST00000494945 HOXC9P31274 260 aa14.61□□□□□ -0.07
PKP4-215ENST00000494945 EIF4A2Q14240 407 aaKnown RBP14.61□□□□□ -0.07
PKP4-215ENST00000494945 HSP90AB2PQ58FF8 381 aa14.61□□□□□ -0.07
PKP4-215ENST00000494945 LMO7Q8WWI1 1683 aa14.61□□□□□ -0.07
PKP4-215ENST00000494945 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
PKP4-215ENST00000494945 CCDC146Q8IYE0 955 aa14.6□□□□□ -0.07
PKP4-215ENST00000494945 IP6K1Q92551 441 aa14.6□□□□□ -0.07
PKP4-215ENST00000494945 FCHSD2O94868 740 aa14.59□□□□□ -0.07
PKP4-215ENST00000494945 CPDO75976 1380 aa14.59□□□□□ -0.07
PKP4-215ENST00000494945 COL14A1Q05707 1796 aaKnown RBP14.58□□□□□ -0.08
PKP4-215ENST00000494945 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
PKP4-215ENST00000494945 APAF1O14727 1248 aa14.57□□□□□ -0.08
PKP4-215ENST00000494945 CERKQ8TCT0 537 aa14.57□□□□□ -0.08
PKP4-215ENST00000494945 LRRC59Q96AG4 307 aaKnown RBP14.57□□□□□ -0.08
PKP4-215ENST00000494945 PLEKHF1Q96S99 279 aa14.57□□□□□ -0.08
PKP4-215ENST00000494945 RSPH6AQ9H0K4 717 aa14.57□□□□□ -0.08
PKP4-215ENST00000494945 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
PKP4-215ENST00000494945 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
PKP4-215ENST00000494945 PDE3BQ13370 1112 aa14.56□□□□□ -0.08
PKP4-215ENST00000494945 KDRP35968 1356 aa14.56□□□□□ -0.08
PKP4-215ENST00000494945 PLCH1Q4KWH8 1693 aa14.55□□□□□ -0.08
PKP4-215ENST00000494945 NEFMP07197 916 aa14.55□□□□□ -0.08
PKP4-215ENST00000494945 TCP11L2Q8N4U5 519 aa14.55□□□□□ -0.08
PKP4-215ENST00000494945 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
PKP4-215ENST00000494945 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
PKP4-215ENST00000494945 CABLES1Q8TDN4 633 aa14.54□□□□□ -0.08
PKP4-215ENST00000494945 NCAPD2Q15021 1401 aa14.54□□□□□ -0.08
PKP4-215ENST00000494945 PARP4Q9UKK3 1724 aaKnown RBP14.53□□□□□ -0.08
PKP4-215ENST00000494945 NWD2Q9ULI1 1742 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 KIAA0232Q92628 1395 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 ZNF521Q96K83 1311 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 HMOX1P09601 288 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 ZC3H6P61129 1189 aaKnown RBP14.53□□□□□ -0.08
PKP4-215ENST00000494945 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
PKP4-215ENST00000494945 WNK3Q9BYP7 1800 aa14.52□□□□□ -0.08
PKP4-215ENST00000494945 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
PKP4-215ENST00000494945 PIP4K2BP78356 416 aa14.52□□□□□ -0.09
PKP4-215ENST00000494945 SULT6B1Q6IMI4 303 aa14.52□□□□□ -0.09
PKP4-215ENST00000494945 EYA1Q99502 592 aa14.52□□□□□ -0.09
PKP4-215ENST00000494945 SALL2Q9Y467 1007 aaPredicted RBP14.52□□□□□ -0.09
PKP4-215ENST00000494945 HAP1P54257 671 aaPredicted RBP14.51□□□□□ -0.09
PKP4-215ENST00000494945 PKD1L3Q7Z443 1732 aa14.51□□□□□ -0.09
PKP4-215ENST00000494945 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
PKP4-215ENST00000494945 TMPOP42166 694 aaKnown RBP14.5□□□□□ -0.09
PKP4-215ENST00000494945 AEBP1Q8IUX7 1158 aa14.5□□□□□ -0.09
PKP4-215ENST00000494945 LTV1Q96GA3 475 aaPredicted RBP14.5□□□□□ -0.09
PKP4-215ENST00000494945 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
PKP4-215ENST00000494945 ERBB3P21860 1342 aa14.49□□□□□ -0.09
PKP4-215ENST00000494945 NFE2L2Q16236 605 aa14.49□□□□□ -0.09
PKP4-215ENST00000494945 ANKRD24Q8TF21 1146 aa14.49□□□□□ -0.09
PKP4-215ENST00000494945 AXIN2Q9Y2T1 843 aa14.49□□□□□ -0.09
PKP4-215ENST00000494945 GOLGA2Q08379 1002 aa14.48□□□□□ -0.09
PKP4-215ENST00000494945 WWC1Q8IX03 1113 aa14.48□□□□□ -0.09
PKP4-215ENST00000494945 PHACTR3Q96KR7 559 aa14.48□□□□□ -0.09
PKP4-215ENST00000494945 PRDM11Q9NQV5 511 aa14.48□□□□□ -0.09
PKP4-215ENST00000494945 RRP7AQ9Y3A4 280 aaKnown RBP14.48□□□□□ -0.09
PKP4-215ENST00000494945 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
PKP4-215ENST00000494945 LRRC37A3O60309 1634 aa14.48□□□□□ -0.09
PKP4-215ENST00000494945 SCN11AQ9UI33 1791 aa14.47□□□□□ -0.09
PKP4-215ENST00000494945 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
PKP4-215ENST00000494945 WDR63Q8IWG1 891 aa14.47□□□□□ -0.09
PKP4-215ENST00000494945 RIPK4P57078 832 aa14.46□□□□□ -0.09
PKP4-215ENST00000494945 CHRNA2Q15822 529 aa14.46□□□□□ -0.09
PKP4-215ENST00000494945 NBPF6Q5VWK0 638 aa14.46□□□□□ -0.09
PKP4-215ENST00000494945 NBPF4Q96M43 638 aa14.46□□□□□ -0.09
PKP4-215ENST00000494945 PLEKHG2Q9H7P9 1386 aa14.46□□□□□ -0.1
PKP4-215ENST00000494945 SIPA1L3O60292 1781 aaPredicted RBP14.45□□□□□ -0.1
PKP4-215ENST00000494945 LMOD3Q0VAK6 560 aa14.45□□□□□ -0.1
PKP4-215ENST00000494945 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
PKP4-215ENST00000494945 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
PKP4-215ENST00000494945 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.44□□□□□ -0.1
PKP4-215ENST00000494945 E9PSI1 815 aa14.44□□□□□ -0.1
PKP4-215ENST00000494945 SLFN5Q08AF3 891 aa14.44□□□□□ -0.1
PKP4-215ENST00000494945 CDCA7LQ96GN5 454 aa14.44□□□□□ -0.1
PKP4-215ENST00000494945 ADAMTS7Q9UKP4 1686 aa14.44□□□□□ -0.1
PKP4-215ENST00000494945 JCADQ9P266 1359 aa14.44□□□□□ -0.1
PKP4-215ENST00000494945 IL16Q14005 1332 aa14.43□□□□□ -0.1
PKP4-215ENST00000494945 WDR17Q8IZU2 1322 aa14.43□□□□□ -0.1
PKP4-215ENST00000494945 TRMT2AQ8IZ69 625 aaKnown RBP14.43□□□□□ -0.1
PKP4-215ENST00000494945 USHBP1Q8N6Y0 703 aa14.43□□□□□ -0.1
PKP4-215ENST00000494945 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
PKP4-215ENST00000494945 CACNA1FO60840 1977 aa14.42□□□□□ -0.1
PKP4-215ENST00000494945 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
PKP4-215ENST00000494945 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
PKP4-215ENST00000494945 FAM83GA6ND36 823 aa14.41□□□□□ -0.1
PKP4-215ENST00000494945 NLRP2Q9NX02 1062 aa14.41□□□□□ -0.1
PKP4-215ENST00000494945 KDM3BQ7LBC6 1761 aa14.4□□□□□ -0.1
PKP4-215ENST00000494945 MTHFSDQ2M296 383 aaKnown RBP14.4□□□□□ -0.1
PKP4-215ENST00000494945 DUSP27Q5VZP5 1158 aa14.4□□□□□ -0.1
PKP4-215ENST00000494945 HTATSF1O43719 755 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms