RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 COL18A1P39060 1754 aa25.1■■□□□ 1.61
COL20A1-207ENST00000494913 THRAP3Q9Y2W1 955 aaKnown RBP25.1■■□□□ 1.61
COL20A1-207ENST00000494913 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
COL20A1-207ENST00000494913 CRB1P82279 1406 aa25.1■■□□□ 1.61
COL20A1-207ENST00000494913 ANKRD36BQ8N2N9 1353 aa25.1■■□□□ 1.61
COL20A1-207ENST00000494913 TOM1L2Q6ZVM7 507 aa25.09■■□□□ 1.61
COL20A1-207ENST00000494913 SF3B2Q13435 895 aaKnown RBP25.08■■□□□ 1.6
COL20A1-207ENST00000494913 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
COL20A1-207ENST00000494913 WDR17Q8IZU2 1322 aa25.06■■□□□ 1.6
COL20A1-207ENST00000494913 CSB-PGBD3P0DP91 1061 aa25.06■■□□□ 1.6
COL20A1-207ENST00000494913 EIF4G2P78344 907 aaKnown RBP eCLIP25.06■■□□□ 1.6
COL20A1-207ENST00000494913 PDE3BQ13370 1112 aa25.05■■□□□ 1.6
COL20A1-207ENST00000494913 OVOS2A0A0J9YW53 1432 aa25.04■■□□□ 1.6
COL20A1-207ENST00000494913 OVOS2Q6IE36 1432 aa25.04■■□□□ 1.6
COL20A1-207ENST00000494913 COG3Q96JB2 828 aa25.04■■□□□ 1.6
COL20A1-207ENST00000494913 RGPD5Q99666 1765 aa25.04■■□□□ 1.6
COL20A1-207ENST00000494913 HSPA5P11021 654 aaKnown RBP25.03■■□□□ 1.6
COL20A1-207ENST00000494913 DEFB132Q7Z7B7 95 aa25.02■■□□□ 1.6
COL20A1-207ENST00000494913 FAM196AQ6ZSG2 479 aa25.01■■□□□ 1.59
COL20A1-207ENST00000494913 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
COL20A1-207ENST00000494913 FYB1O15117 783 aa25■■□□□ 1.59
COL20A1-207ENST00000494913 CARD10Q9BWT7 1032 aa25■■□□□ 1.59
COL20A1-207ENST00000494913 GGNBP2Q9H3C7 697 aa24.99■■□□□ 1.59
COL20A1-207ENST00000494913 ABCC6O95255 1503 aa24.98■■□□□ 1.59
COL20A1-207ENST00000494913 LTN1O94822 1766 aa24.97■■□□□ 1.59
COL20A1-207ENST00000494913 FBLN1P23142 703 aa24.97■■□□□ 1.59
COL20A1-207ENST00000494913 CARD14Q9BXL6 1004 aa24.97■■□□□ 1.59
COL20A1-207ENST00000494913 TRIM37O94972 964 aa24.96■■□□□ 1.59
COL20A1-207ENST00000494913 BAG6P46379 1132 aa24.96■■□□□ 1.59
COL20A1-207ENST00000494913 DDB1Q16531 1140 aa24.96■■□□□ 1.59
COL20A1-207ENST00000494913 NLRP2Q9NX02 1062 aa24.96■■□□□ 1.59
COL20A1-207ENST00000494913 ERBB3P21860 1342 aa24.95■■□□□ 1.59
COL20A1-207ENST00000494913 ANKRD24Q8TF21 1146 aa24.95■■□□□ 1.58
COL20A1-207ENST00000494913 IP6K1Q92551 441 aa24.95■■□□□ 1.58
COL20A1-207ENST00000494913 CDCA7Q9BWT1 371 aaPredicted RBP24.95■■□□□ 1.58
COL20A1-207ENST00000494913 MYOM1P52179 1685 aa24.94■■□□□ 1.58
COL20A1-207ENST00000494913 PARP4Q9UKK3 1724 aaKnown RBP24.94■■□□□ 1.58
COL20A1-207ENST00000494913 MAP3K19Q56UN5 1328 aa24.93■■□□□ 1.58
COL20A1-207ENST00000494913 AMPHP49418 695 aa24.92■■□□□ 1.58
COL20A1-207ENST00000494913 CCDC7Q96M83 1385 aa24.92■■□□□ 1.58
COL20A1-207ENST00000494913 EN1Q05925 392 aaPredicted RBP24.91■■□□□ 1.58
COL20A1-207ENST00000494913 NSD3Q9BZ95 1437 aa24.9■■□□□ 1.58
COL20A1-207ENST00000494913 LTV1Q96GA3 475 aaPredicted RBP24.9■■□□□ 1.58
COL20A1-207ENST00000494913 RGPD1P0DJD0 1748 aa24.9■■□□□ 1.58
COL20A1-207ENST00000494913 RRS1Q15050 365 aaKnown RBP24.89■■□□□ 1.58
COL20A1-207ENST00000494913 HOXC9P31274 260 aa24.89■■□□□ 1.57
COL20A1-207ENST00000494913 EXOC5O00471 708 aa24.88■■□□□ 1.57
COL20A1-207ENST00000494913 DISP2A7MBM2 1401 aa24.87■■□□□ 1.57
COL20A1-207ENST00000494913 LRRC37A3O60309 1634 aa24.87■■□□□ 1.57
COL20A1-207ENST00000494913 C11orf95C9JLR9 678 aaPredicted RBP24.87■■□□□ 1.57
COL20A1-207ENST00000494913 APBA3O96018 575 aa24.87■■□□□ 1.57
COL20A1-207ENST00000494913 MARCH10Q8NA82 808 aaPredicted RBP24.86■■□□□ 1.57
COL20A1-207ENST00000494913 KIF20BQ96Q89 1820 aa24.85■■□□□ 1.57
COL20A1-207ENST00000494913 WNK3Q9BYP7 1800 aa24.85■■□□□ 1.57
COL20A1-207ENST00000494913 OVOS2A0A0G2JMS6 1433 aa24.85■■□□□ 1.57
COL20A1-207ENST00000494913 CGNL1Q0VF96 1302 aa24.85■■□□□ 1.57
COL20A1-207ENST00000494913 IL2RBP14784 551 aa24.83■■□□□ 1.57
COL20A1-207ENST00000494913 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
COL20A1-207ENST00000494913 EZH2Q15910 746 aaKnown RBP24.83■■□□□ 1.56
COL20A1-207ENST00000494913 PANK3Q9H999 370 aa24.83■■□□□ 1.56
COL20A1-207ENST00000494913 CAMKK2Q96RR4 588 aa24.82■■□□□ 1.56
COL20A1-207ENST00000494913 RTL1A6NKG5 1358 aa24.81■■□□□ 1.56
COL20A1-207ENST00000494913 SRCAPQ6ZRS2 3230 aa24.8■■□□□ 1.56
COL20A1-207ENST00000494913 PEAK1Q9H792 1746 aa24.8■■□□□ 1.56
COL20A1-207ENST00000494913 HSP90AB2PQ58FF8 381 aa24.77■■□□□ 1.56
COL20A1-207ENST00000494913 TNS2Q63HR2 1409 aa24.77■■□□□ 1.56
COL20A1-207ENST00000494913 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
COL20A1-207ENST00000494913 PTF1AQ7RTS3 328 aa24.76■■□□□ 1.55
COL20A1-207ENST00000494913 BCL11BQ9C0K0 894 aaPredicted RBP24.76■■□□□ 1.55
COL20A1-207ENST00000494913 FLT4P35916 1363 aa24.75■■□□□ 1.55
COL20A1-207ENST00000494913 BCL9O00512 1426 aa24.75■■□□□ 1.55
COL20A1-207ENST00000494913 PPM1GO15355 546 aaPredicted RBP24.75■■□□□ 1.55
COL20A1-207ENST00000494913 NBPF6Q5VWK0 638 aa24.75■■□□□ 1.55
COL20A1-207ENST00000494913 NBPF4Q96M43 638 aa24.75■■□□□ 1.55
COL20A1-207ENST00000494913 FAM208AQ9UK61 1670 aaKnown RBP24.75■■□□□ 1.55
COL20A1-207ENST00000494913 INSRP06213 1382 aa24.74■■□□□ 1.55
COL20A1-207ENST00000494913 KIF24Q5T7B8 1368 aa24.74■■□□□ 1.55
COL20A1-207ENST00000494913 PARD3Q8TEW0 1356 aa24.74■■□□□ 1.55
COL20A1-207ENST00000494913 TNNT2P45379 298 aaPredicted RBP24.73■■□□□ 1.55
COL20A1-207ENST00000494913 SBF2Q86WG5 1849 aa24.73■■□□□ 1.55
COL20A1-207ENST00000494913 KIF7Q2M1P5 1343 aa24.73■■□□□ 1.55
COL20A1-207ENST00000494913 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
COL20A1-207ENST00000494913 PSDA5PKW4 1024 aaPredicted RBP24.72■■□□□ 1.55
COL20A1-207ENST00000494913 USHBP1Q8N6Y0 703 aa24.71■■□□□ 1.55
COL20A1-207ENST00000494913 RGPD2P0DJD1 1756 aa24.71■■□□□ 1.55
COL20A1-207ENST00000494913 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.55
COL20A1-207ENST00000494913 POLKQ9UBT6 870 aa24.7■■□□□ 1.54
COL20A1-207ENST00000494913 PLSCR1O15162 318 aa24.69■■□□□ 1.54
COL20A1-207ENST00000494913 KCNQ2O43526 872 aa24.69■■□□□ 1.54
COL20A1-207ENST00000494913 ACSBG1Q96GR2 724 aa24.69■■□□□ 1.54
COL20A1-207ENST00000494913 KNSTRNQ9Y448 316 aa24.69■■□□□ 1.54
COL20A1-207ENST00000494913 R3HDM1Q15032 1099 aaKnown RBP24.68■■□□□ 1.54
COL20A1-207ENST00000494913 ZCRB1Q8TBF4 217 aaKnown RBP24.67■■□□□ 1.54
COL20A1-207ENST00000494913 MAP2P11137 1827 aaKnown RBP24.66■■□□□ 1.54
COL20A1-207ENST00000494913 WASHC2AQ641Q2 1341 aa24.66■■□□□ 1.54
COL20A1-207ENST00000494913 RAPGEF4Q8WZA2 1011 aa24.65■■□□□ 1.54
COL20A1-207ENST00000494913 MEGF6O75095 1541 aa24.64■■□□□ 1.54
COL20A1-207ENST00000494913 NSD2O96028 1365 aa24.64■■□□□ 1.53
COL20A1-207ENST00000494913 NBPF14Q5TI25 921 aa24.64■■□□□ 1.53
COL20A1-207ENST00000494913 MORC1Q86VD1 984 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms