RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 GJA5P36382 358 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 BLOC1S3Q6QNY0 202 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 ABCC5O15440 1437 aa11.34□□□□□ -0.59
RPGR-210ENST00000494841 SPAG9O60271 1321 aaKnown RBP11.34□□□□□ -0.59
RPGR-210ENST00000494841 ZNF518AQ6AHZ1 1483 aa11.33□□□□□ -0.6
RPGR-210ENST00000494841 ARHGEF5Q12774 1597 aa11.33□□□□□ -0.6
RPGR-210ENST00000494841 CCDC141Q6ZP82 1450 aa11.32□□□□□ -0.6
RPGR-210ENST00000494841 FDX1P10109 184 aa11.32□□□□□ -0.6
RPGR-210ENST00000494841 PCDHGC3Q9UN70 934 aa11.32□□□□□ -0.6
RPGR-210ENST00000494841 DAPK1P53355 1430 aa11.32□□□□□ -0.6
RPGR-210ENST00000494841 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
RPGR-210ENST00000494841 SLC27A5Q9Y2P5 690 aa11.31□□□□□ -0.6
RPGR-210ENST00000494841 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
RPGR-210ENST00000494841 YEATS2Q9ULM3 1422 aa11.31□□□□□ -0.6
RPGR-210ENST00000494841 KDM5CP41229 1560 aa11.31□□□□□ -0.6
RPGR-210ENST00000494841 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
RPGR-210ENST00000494841 COPS2P61201 443 aa11.3□□□□□ -0.6
RPGR-210ENST00000494841 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
RPGR-210ENST00000494841 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
RPGR-210ENST00000494841 MTRQ99707 1265 aa11.3□□□□□ -0.6
RPGR-210ENST00000494841 PCDHB15Q9Y5E8 787 aa11.3□□□□□ -0.6
RPGR-210ENST00000494841 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
RPGR-210ENST00000494841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPGR-210ENST00000494841 TJAP1Q5JTD0 557 aa11.29□□□□□ -0.6
RPGR-210ENST00000494841 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPGR-210ENST00000494841 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
RPGR-210ENST00000494841 MLH3Q9UHC1 1453 aa11.29□□□□□ -0.6
RPGR-210ENST00000494841 ZMYM4Q5VZL5 1548 aa11.29□□□□□ -0.6
RPGR-210ENST00000494841 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
RPGR-210ENST00000494841 C9orf84Q5VXU9 1444 aa11.28□□□□□ -0.6
RPGR-210ENST00000494841 CROCC2H7BZ55 1655 aa11.28□□□□□ -0.6
RPGR-210ENST00000494841 NR1I2O75469 434 aa11.28□□□□□ -0.6
RPGR-210ENST00000494841 ATP7AQ04656 1500 aa11.27□□□□□ -0.61
RPGR-210ENST00000494841 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
RPGR-210ENST00000494841 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
RPGR-210ENST00000494841 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.61
RPGR-210ENST00000494841 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
RPGR-210ENST00000494841 MAGI2Q86UL8 1455 aa11.26□□□□□ -0.61
RPGR-210ENST00000494841 QPCTQ16769 361 aa11.26□□□□□ -0.61
RPGR-210ENST00000494841 FBXO31Q5XUX0 539 aaPredicted RBP11.26□□□□□ -0.61
RPGR-210ENST00000494841 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
RPGR-210ENST00000494841 RTEL1-TNFRSF6BF6WH68 1400 aa11.26□□□□□ -0.61
RPGR-210ENST00000494841 MAST1Q9Y2H9 1570 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 RNF19BQ6ZMZ0 732 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 IL21Q9HBE4 155 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 ATP10AO60312 1499 aa11.25□□□□□ -0.61
RPGR-210ENST00000494841 DIP2CQ9Y2E4 1556 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 LILRB3O75022 631 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 ZPR1O75312 459 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
RPGR-210ENST00000494841 Q3C1V9 767 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 PRPF38BQ5VTL8 546 aaKnown RBP11.24□□□□□ -0.61
RPGR-210ENST00000494841 ZNF516Q92618 1163 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
RPGR-210ENST00000494841 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
RPGR-210ENST00000494841 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 SHANK2Q9UPX8 1470 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
RPGR-210ENST00000494841 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 TLL1O43897 1013 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 ITGBL1O95965 494 aaPredicted RBP11.23□□□□□ -0.61
RPGR-210ENST00000494841 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 SYMPKQ92797 1274 aaKnown RBP11.23□□□□□ -0.61
RPGR-210ENST00000494841 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
RPGR-210ENST00000494841 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 A2MP01023 1474 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 HRCP23327 699 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 MTMR2Q13614 643 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 MLECQ14165 292 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 KIF15Q9NS87 1388 aa11.22□□□□□ -0.61
RPGR-210ENST00000494841 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
RPGR-210ENST00000494841 FMNL1O95466 1100 aaPredicted RBP11.21□□□□□ -0.61
RPGR-210ENST00000494841 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
RPGR-210ENST00000494841 ADGRL2O95490 1459 aa11.2□□□□□ -0.62
RPGR-210ENST00000494841 ROCK1Q13464 1354 aa11.2□□□□□ -0.62
RPGR-210ENST00000494841 KIF3BO15066 747 aa11.2□□□□□ -0.62
RPGR-210ENST00000494841 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
RPGR-210ENST00000494841 PPP2R2DQ66LE6 453 aa11.2□□□□□ -0.62
RPGR-210ENST00000494841 GGT6Q6P531 493 aa11.19□□□□□ -0.62
RPGR-210ENST00000494841 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
RPGR-210ENST00000494841 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
RPGR-210ENST00000494841 SPSB2Q99619 263 aa11.18□□□□□ -0.62
RPGR-210ENST00000494841 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
RPGR-210ENST00000494841 DUOX2Q9NRD8 1548 aa11.18□□□□□ -0.62
RPGR-210ENST00000494841 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
RPGR-210ENST00000494841 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
RPGR-210ENST00000494841 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
RPGR-210ENST00000494841 ADH1BP00325 375 aa11.17□□□□□ -0.62
RPGR-210ENST00000494841 RFC5P40937 340 aa11.17□□□□□ -0.62
RPGR-210ENST00000494841 KCNC4Q03721 635 aa11.17□□□□□ -0.62
RPGR-210ENST00000494841 NUTM2DQ5VT03 806 aaPredicted RBP11.17□□□□□ -0.62
RPGR-210ENST00000494841 NUTM2AQ8IVF1 878 aaPredicted RBP11.17□□□□□ -0.62
RPGR-210ENST00000494841 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
RPGR-210ENST00000494841 NAIPQ13075 1403 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms