RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 C8orf37Q96NL8 207 aa13.03□□□□□ -0.32
CALCA-206ENST00000494746 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
CALCA-206ENST00000494746 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
CALCA-206ENST00000494746 NWD2Q9ULI1 1742 aa13.03□□□□□ -0.32
CALCA-206ENST00000494746 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
CALCA-206ENST00000494746 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.32
CALCA-206ENST00000494746 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.32
CALCA-206ENST00000494746 RTL1A6NKG5 1358 aa13.02□□□□□ -0.32
CALCA-206ENST00000494746 FLT4P35916 1363 aa13.02□□□□□ -0.32
CALCA-206ENST00000494746 SLIT2O94813 1529 aa13.02□□□□□ -0.33
CALCA-206ENST00000494746 ANP32CO43423 234 aa13.02□□□□□ -0.33
CALCA-206ENST00000494746 MEX3CQ5U5Q3 659 aaKnown RBP13.02□□□□□ -0.33
CALCA-206ENST00000494746 HOXC9P31274 260 aa13.01□□□□□ -0.33
CALCA-206ENST00000494746 AMPHP49418 695 aa13.01□□□□□ -0.33
CALCA-206ENST00000494746 MTHFSP49914 203 aa13.01□□□□□ -0.33
CALCA-206ENST00000494746 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
CALCA-206ENST00000494746 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
CALCA-206ENST00000494746 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
CALCA-206ENST00000494746 HSP90AB2PQ58FF8 381 aa13□□□□□ -0.33
CALCA-206ENST00000494746 BTG4Q9NY30 223 aa13□□□□□ -0.33
CALCA-206ENST00000494746 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
CALCA-206ENST00000494746 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
CALCA-206ENST00000494746 IP6K1Q92551 441 aa12.99□□□□□ -0.33
CALCA-206ENST00000494746 NGLY1Q96IV0 654 aa12.99□□□□□ -0.33
CALCA-206ENST00000494746 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.99□□□□□ -0.33
CALCA-206ENST00000494746 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
CALCA-206ENST00000494746 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
CALCA-206ENST00000494746 INSRP06213 1382 aa12.98□□□□□ -0.33
CALCA-206ENST00000494746 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
CALCA-206ENST00000494746 ERBB3P21860 1342 aa12.97□□□□□ -0.33
CALCA-206ENST00000494746 AFF2P51816 1311 aa12.97□□□□□ -0.33
CALCA-206ENST00000494746 FAM208AQ9UK61 1670 aaKnown RBP12.97□□□□□ -0.33
CALCA-206ENST00000494746 LTV1Q96GA3 475 aaPredicted RBP12.96□□□□□ -0.33
CALCA-206ENST00000494746 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 BCL11AQ9H165 835 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 STRN4Q9NRL3 753 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 RGPD1P0DJD0 1748 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 EIF4A2Q14240 407 aaKnown RBP12.95□□□□□ -0.34
CALCA-206ENST00000494746 CCDC184Q52MB2 194 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 LARP1Q6PKG0 1096 aaKnown RBP12.95□□□□□ -0.34
CALCA-206ENST00000494746 UNC5CLQ8IV45 518 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 USP21Q9UK80 565 aa12.95□□□□□ -0.34
CALCA-206ENST00000494746 WDR17Q8IZU2 1322 aa12.94□□□□□ -0.34
CALCA-206ENST00000494746 EP400Q96L91 3159 aa12.93□□□□□ -0.34
CALCA-206ENST00000494746 CSB-PGBD3P0DP91 1061 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 IL13P35225 146 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 EVA1CP58658 441 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 MIER1Q8N108 512 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 ATRNO75882 1429 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 CRB1P82279 1406 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
CALCA-206ENST00000494746 RGS17Q9UGC6 210 aaPredicted RBP12.92□□□□□ -0.34
CALCA-206ENST00000494746 DIAPH1O60610 1272 aaKnown RBP12.91□□□□□ -0.34
CALCA-206ENST00000494746 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
CALCA-206ENST00000494746 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
CALCA-206ENST00000494746 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
CALCA-206ENST00000494746 WNK3Q9BYP7 1800 aa12.91□□□□□ -0.34
CALCA-206ENST00000494746 GLI3P10071 1580 aa12.91□□□□□ -0.34
CALCA-206ENST00000494746 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 EYA1Q99502 592 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 VPS72Q15906 364 aa12.9□□□□□ -0.34
CALCA-206ENST00000494746 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
CALCA-206ENST00000494746 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 ZNF772Q68DY9 489 aaPredicted RBP12.89□□□□□ -0.35
CALCA-206ENST00000494746 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 MRS2Q9HD23 443 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
CALCA-206ENST00000494746 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
CALCA-206ENST00000494746 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
CALCA-206ENST00000494746 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
CALCA-206ENST00000494746 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
CALCA-206ENST00000494746 AEBP1Q8IUX7 1158 aa12.88□□□□□ -0.35
CALCA-206ENST00000494746 QTRT2Q9H974 415 aaKnown RBP12.88□□□□□ -0.35
CALCA-206ENST00000494746 KDRP35968 1356 aa12.87□□□□□ -0.35
CALCA-206ENST00000494746 MEGF6O75095 1541 aa12.87□□□□□ -0.35
CALCA-206ENST00000494746 HMOX1P09601 288 aa12.86□□□□□ -0.35
CALCA-206ENST00000494746 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
CALCA-206ENST00000494746 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
CALCA-206ENST00000494746 CCER2I3L3R5 266 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 POTEAQ6S8J7 498 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 THSD7AQ9UPZ6 1657 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
CALCA-206ENST00000494746 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
CALCA-206ENST00000494746 NUDCQ9Y266 331 aa12.85□□□□□ -0.35
CALCA-206ENST00000494746 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CALCA-206ENST00000494746 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
CALCA-206ENST00000494746 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
CALCA-206ENST00000494746 THRAP3Q9Y2W1 955 aaKnown RBP12.83□□□□□ -0.35
CALCA-206ENST00000494746 WDR43Q15061 677 aaKnown RBP eCLIP12.83□□□□□ -0.36
CALCA-206ENST00000494746 BARGINQ6ZT62 677 aa12.83□□□□□ -0.36
CALCA-206ENST00000494746 PKD1L3Q7Z443 1732 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms