RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 OVOS2Q6IE36 1432 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 ZBTB7AO95365 584 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 DDB1Q16531 1140 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 SLIT3O75094 1523 aa16.91■□□□□ 0.3
CSNK1E-212ENST00000494610 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.3
CSNK1E-212ENST00000494610 CASZ1Q86V15 1759 aa16.89■□□□□ 0.3
CSNK1E-212ENST00000494610 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
CSNK1E-212ENST00000494610 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
CSNK1E-212ENST00000494610 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-212ENST00000494610 GOLGB1Q14789 3259 aaKnown RBP16.87■□□□□ 0.29
CSNK1E-212ENST00000494610 PLSCR1O15162 318 aa16.87■□□□□ 0.29
CSNK1E-212ENST00000494610 MYOM1P52179 1685 aa16.86■□□□□ 0.29
CSNK1E-212ENST00000494610 WDR17Q8IZU2 1322 aa16.86■□□□□ 0.29
CSNK1E-212ENST00000494610 PTGER2P43116 358 aa16.85■□□□□ 0.29
CSNK1E-212ENST00000494610 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
CSNK1E-212ENST00000494610 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
CSNK1E-212ENST00000494610 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
CSNK1E-212ENST00000494610 AKAP12Q02952 1782 aa16.84■□□□□ 0.29
CSNK1E-212ENST00000494610 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
CSNK1E-212ENST00000494610 ARHGEF25Q86VW2 580 aa16.84■□□□□ 0.29
CSNK1E-212ENST00000494610 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
CSNK1E-212ENST00000494610 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
CSNK1E-212ENST00000494610 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
CSNK1E-212ENST00000494610 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
CSNK1E-212ENST00000494610 L3MBTL2Q969R5 705 aa16.83■□□□□ 0.28
CSNK1E-212ENST00000494610 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
CSNK1E-212ENST00000494610 ACSBG1Q96GR2 724 aa16.82■□□□□ 0.28
CSNK1E-212ENST00000494610 SIN3AQ96ST3 1273 aa16.82■□□□□ 0.28
CSNK1E-212ENST00000494610 BRD4O60885 1362 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-212ENST00000494610 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
CSNK1E-212ENST00000494610 FHDC1Q9C0D6 1143 aaPredicted RBP16.79■□□□□ 0.28
CSNK1E-212ENST00000494610 NFAT5O94916 1531 aa16.79■□□□□ 0.28
CSNK1E-212ENST00000494610 EVC2Q86UK5 1308 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 DCAF8L1A6NGE4 600 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 C11orf95C9JLR9 678 aaPredicted RBP16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 EXOC5O00471 708 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 SLC15A2Q16348 729 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 STK32BQ9NY57 414 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
CSNK1E-212ENST00000494610 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
CSNK1E-212ENST00000494610 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
CSNK1E-212ENST00000494610 BCL9O00512 1426 aa16.76■□□□□ 0.27
CSNK1E-212ENST00000494610 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 NME9Q86XW9 330 aa16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 ZNF784Q8NCA9 323 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
CSNK1E-212ENST00000494610 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
CSNK1E-212ENST00000494610 ZEB1P37275 1124 aaPredicted RBP16.74■□□□□ 0.27
CSNK1E-212ENST00000494610 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
CSNK1E-212ENST00000494610 TNS2Q63HR2 1409 aa16.73■□□□□ 0.27
CSNK1E-212ENST00000494610 NHSQ6T4R5 1651 aa16.73■□□□□ 0.27
CSNK1E-212ENST00000494610 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
CSNK1E-212ENST00000494610 NLRP2Q9NX02 1062 aa16.73■□□□□ 0.27
CSNK1E-212ENST00000494610 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
CSNK1E-212ENST00000494610 ROCK2O75116 1388 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-212ENST00000494610 TTC21AQ8NDW8 1320 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 MON2Q7Z3U7 1717 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 BTAF1O14981 1849 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 KCNQ4P56696 695 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 MTFR1LQ9H019 292 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 CCDC7Q96M83 1385 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 CD163L1Q9NR16 1453 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 LTN1O94822 1766 aa16.71■□□□□ 0.27
CSNK1E-212ENST00000494610 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
CSNK1E-212ENST00000494610 CEP350Q5VT06 3117 aa16.7■□□□□ 0.26
CSNK1E-212ENST00000494610 ERBB3P21860 1342 aa16.7■□□□□ 0.26
CSNK1E-212ENST00000494610 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
CSNK1E-212ENST00000494610 ANKRD24Q8TF21 1146 aa16.68■□□□□ 0.26
CSNK1E-212ENST00000494610 ARXQ96QS3 562 aa16.68■□□□□ 0.26
CSNK1E-212ENST00000494610 SLC12A5Q9H2X9 1139 aa16.68■□□□□ 0.26
CSNK1E-212ENST00000494610 ABCC6O95255 1503 aa16.68■□□□□ 0.26
CSNK1E-212ENST00000494610 IL2RBP14784 551 aa16.67■□□□□ 0.26
CSNK1E-212ENST00000494610 FBLN1P23142 703 aa16.67■□□□□ 0.26
CSNK1E-212ENST00000494610 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
CSNK1E-212ENST00000494610 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
CSNK1E-212ENST00000494610 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
CSNK1E-212ENST00000494610 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-212ENST00000494610 CHD4Q14839 1912 aa16.65■□□□□ 0.26
CSNK1E-212ENST00000494610 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-212ENST00000494610 USP54Q70EL1 1684 aa16.63■□□□□ 0.25
CSNK1E-212ENST00000494610 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
CSNK1E-212ENST00000494610 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
CSNK1E-212ENST00000494610 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
CSNK1E-212ENST00000494610 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
CSNK1E-212ENST00000494610 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
CSNK1E-212ENST00000494610 GPR162Q16538 588 aa16.61■□□□□ 0.25
CSNK1E-212ENST00000494610 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
CSNK1E-212ENST00000494610 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
CSNK1E-212ENST00000494610 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
CSNK1E-212ENST00000494610 RGPD2P0DJD1 1756 aa16.61■□□□□ 0.25
CSNK1E-212ENST00000494610 C1QTNF8P60827 252 aa16.6■□□□□ 0.25
CSNK1E-212ENST00000494610 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
CSNK1E-212ENST00000494610 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
CSNK1E-212ENST00000494610 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
CSNK1E-212ENST00000494610 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
CSNK1E-212ENST00000494610 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
CSNK1E-212ENST00000494610 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms