RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 ZRANB1Q9UGI0 708 aa18.66■□□□□ 0.58
SAPCD1-211ENST00000494299 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
SAPCD1-211ENST00000494299 STRN4Q9NRL3 753 aa18.65■□□□□ 0.58
SAPCD1-211ENST00000494299 LTN1O94822 1766 aa18.65■□□□□ 0.58
SAPCD1-211ENST00000494299 WNK3Q9BYP7 1800 aa18.65■□□□□ 0.58
SAPCD1-211ENST00000494299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
SAPCD1-211ENST00000494299 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
SAPCD1-211ENST00000494299 WDR17Q8IZU2 1322 aa18.63■□□□□ 0.57
SAPCD1-211ENST00000494299 EVA1CP58658 441 aa18.62■□□□□ 0.57
SAPCD1-211ENST00000494299 CDCA8Q53HL2 280 aa18.62■□□□□ 0.57
SAPCD1-211ENST00000494299 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
SAPCD1-211ENST00000494299 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
SAPCD1-211ENST00000494299 TNS1Q9HBL0 1735 aaKnown RBP18.6■□□□□ 0.57
SAPCD1-211ENST00000494299 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
SAPCD1-211ENST00000494299 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
SAPCD1-211ENST00000494299 CARD10Q9BWT7 1032 aa18.58■□□□□ 0.56
SAPCD1-211ENST00000494299 FYB1O15117 783 aa18.57■□□□□ 0.56
SAPCD1-211ENST00000494299 KIF20BQ96Q89 1820 aa18.56■□□□□ 0.56
SAPCD1-211ENST00000494299 ERBB3P21860 1342 aa18.56■□□□□ 0.56
SAPCD1-211ENST00000494299 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
SAPCD1-211ENST00000494299 BCL9O00512 1426 aa18.56■□□□□ 0.56
SAPCD1-211ENST00000494299 USP35Q9P2H5 1018 aa18.55■□□□□ 0.56
SAPCD1-211ENST00000494299 SBF2Q86WG5 1849 aa18.54■□□□□ 0.56
SAPCD1-211ENST00000494299 FAM208AQ9UK61 1670 aaKnown RBP18.54■□□□□ 0.56
SAPCD1-211ENST00000494299 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
SAPCD1-211ENST00000494299 FAM182BQ5T319 152 aa18.53■□□□□ 0.56
SAPCD1-211ENST00000494299 FAM196AQ6ZSG2 479 aa18.53■□□□□ 0.56
SAPCD1-211ENST00000494299 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
SAPCD1-211ENST00000494299 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
SAPCD1-211ENST00000494299 A0A0G2JS52 829 aa18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 SOX12O15370 315 aa18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 MYT1Q01538 1121 aa18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 TOM1L2Q6ZVM7 507 aa18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 IP6K1Q92551 441 aa18.52■□□□□ 0.56
SAPCD1-211ENST00000494299 DEFB132Q7Z7B7 95 aa18.51■□□□□ 0.55
SAPCD1-211ENST00000494299 COG3Q96JB2 828 aa18.51■□□□□ 0.55
SAPCD1-211ENST00000494299 MAP3K19Q56UN5 1328 aa18.5■□□□□ 0.55
SAPCD1-211ENST00000494299 ANKRD26Q9UPS8 1709 aa18.5■□□□□ 0.55
SAPCD1-211ENST00000494299 C11orf95C9JLR9 678 aaPredicted RBP18.5■□□□□ 0.55
SAPCD1-211ENST00000494299 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
SAPCD1-211ENST00000494299 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
SAPCD1-211ENST00000494299 KIF24Q5T7B8 1368 aa18.48■□□□□ 0.55
SAPCD1-211ENST00000494299 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
SAPCD1-211ENST00000494299 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
SAPCD1-211ENST00000494299 NSD3Q9BZ95 1437 aa18.48■□□□□ 0.55
SAPCD1-211ENST00000494299 RGPD3A6NKT7 1758 aaPredicted RBP18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 RGPD4Q7Z3J3 1758 aa18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 FBLN1P23142 703 aa18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 ANKRD24Q8TF21 1146 aa18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 TNS2Q63HR2 1409 aa18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 RREB1Q92766 1687 aa18.47■□□□□ 0.55
SAPCD1-211ENST00000494299 HOXC9P31274 260 aa18.46■□□□□ 0.55
SAPCD1-211ENST00000494299 DDB1Q16531 1140 aa18.46■□□□□ 0.55
SAPCD1-211ENST00000494299 GGNBP2Q9H3C7 697 aa18.46■□□□□ 0.55
SAPCD1-211ENST00000494299 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 PARD3Q8TEW0 1356 aa18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 BAG6P46379 1132 aa18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 SF3B2Q13435 895 aaKnown RBP18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 MARCH10Q8NA82 808 aaPredicted RBP18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 CAMKK2Q96RR4 588 aa18.45■□□□□ 0.54
SAPCD1-211ENST00000494299 TRIM37O94972 964 aa18.43■□□□□ 0.54
SAPCD1-211ENST00000494299 CSB-PGBD3P0DP91 1061 aa18.42■□□□□ 0.54
SAPCD1-211ENST00000494299 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
SAPCD1-211ENST00000494299 INSRP06213 1382 aa18.42■□□□□ 0.54
SAPCD1-211ENST00000494299 NCAPD2Q15021 1401 aa18.41■□□□□ 0.54
SAPCD1-211ENST00000494299 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
SAPCD1-211ENST00000494299 CGNL1Q0VF96 1302 aa18.41■□□□□ 0.54
SAPCD1-211ENST00000494299 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
SAPCD1-211ENST00000494299 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
SAPCD1-211ENST00000494299 NLRP2Q9NX02 1062 aa18.4■□□□□ 0.54
SAPCD1-211ENST00000494299 NUP188Q5SRE5 1749 aa18.4■□□□□ 0.54
SAPCD1-211ENST00000494299 EXOC5O00471 708 aa18.39■□□□□ 0.53
SAPCD1-211ENST00000494299 IL2RBP14784 551 aa18.39■□□□□ 0.53
SAPCD1-211ENST00000494299 FLT4P35916 1363 aa18.39■□□□□ 0.53
SAPCD1-211ENST00000494299 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
SAPCD1-211ENST00000494299 PLSCR1O15162 318 aa18.38■□□□□ 0.53
SAPCD1-211ENST00000494299 BCL11BQ9C0K0 894 aaPredicted RBP18.38■□□□□ 0.53
SAPCD1-211ENST00000494299 AMPHP49418 695 aa18.37■□□□□ 0.53
SAPCD1-211ENST00000494299 EZH2Q15910 746 aaKnown RBP18.37■□□□□ 0.53
SAPCD1-211ENST00000494299 APBA3O96018 575 aa18.36■□□□□ 0.53
SAPCD1-211ENST00000494299 NSD2O96028 1365 aa18.36■□□□□ 0.53
SAPCD1-211ENST00000494299 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
SAPCD1-211ENST00000494299 PANK3Q9H999 370 aa18.36■□□□□ 0.53
SAPCD1-211ENST00000494299 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 KIF7Q2M1P5 1343 aa18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 HSP90AB2PQ58FF8 381 aa18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
SAPCD1-211ENST00000494299 MEGF6O75095 1541 aa18.34■□□□□ 0.53
SAPCD1-211ENST00000494299 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
SAPCD1-211ENST00000494299 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
SAPCD1-211ENST00000494299 LRP5O75197 1615 aa18.33■□□□□ 0.52
SAPCD1-211ENST00000494299 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
SAPCD1-211ENST00000494299 PROM2Q8N271 834 aa18.31■□□□□ 0.52
SAPCD1-211ENST00000494299 LTV1Q96GA3 475 aaPredicted RBP18.31■□□□□ 0.52
SAPCD1-211ENST00000494299 BTAF1O14981 1849 aa18.3■□□□□ 0.52
SAPCD1-211ENST00000494299 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
SAPCD1-211ENST00000494299 AMER1Q5JTC6 1135 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms