RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 CDK12Q9NYV4 1490 aaPredicted RBP28.85■■■□□ 2.21
STX1A-212ENST00000494245 PPP2R1AP30153 589 aa28.85■■■□□ 2.21
STX1A-212ENST00000494245 EMILIN1Q9Y6C2 1016 aa28.85■■■□□ 2.21
STX1A-212ENST00000494245 BLMP54132 1417 aaPredicted RBP28.85■■■□□ 2.21
STX1A-212ENST00000494245 FAM83GA6ND36 823 aa28.83■■■□□ 2.21
STX1A-212ENST00000494245 IP6K1Q92551 441 aa28.83■■■□□ 2.21
STX1A-212ENST00000494245 CHRNA2Q15822 529 aa28.82■■■□□ 2.2
STX1A-212ENST00000494245 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.81■■■□□ 2.2
STX1A-212ENST00000494245 HOXC9P31274 260 aa28.81■■■□□ 2.2
STX1A-212ENST00000494245 NRAPQ86VF7 1730 aa28.8■■■□□ 2.2
STX1A-212ENST00000494245 FAM208AQ9UK61 1670 aaKnown RBP28.8■■■□□ 2.2
STX1A-212ENST00000494245 SLIT2O94813 1529 aa28.8■■■□□ 2.2
STX1A-212ENST00000494245 PPM1GO15355 546 aaPredicted RBP28.8■■■□□ 2.2
STX1A-212ENST00000494245 MTHFSP49914 203 aa28.8■■■□□ 2.2
STX1A-212ENST00000494245 C8orf37Q96NL8 207 aa28.8■■■□□ 2.2
STX1A-212ENST00000494245 INSRP06213 1382 aa28.79■■■□□ 2.2
STX1A-212ENST00000494245 CAMTA1Q9Y6Y1 1673 aa28.79■■■□□ 2.2
STX1A-212ENST00000494245 NGLY1Q96IV0 654 aa28.78■■■□□ 2.2
STX1A-212ENST00000494245 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
STX1A-212ENST00000494245 COL5A2P05997 1499 aaPredicted RBP28.76■■■□□ 2.19
STX1A-212ENST00000494245 FNBP4Q8N3X1 1017 aaPredicted RBP28.75■■■□□ 2.19
STX1A-212ENST00000494245 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
STX1A-212ENST00000494245 AXIN2Q9Y2T1 843 aa28.74■■■□□ 2.19
STX1A-212ENST00000494245 HSP90AB2PQ58FF8 381 aa28.72■■■□□ 2.19
STX1A-212ENST00000494245 ERBB3P21860 1342 aa28.71■■■□□ 2.19
STX1A-212ENST00000494245 AFF2P51816 1311 aa28.71■■■□□ 2.19
STX1A-212ENST00000494245 COL3A1P02461 1466 aaPredicted RBP28.71■■■□□ 2.19
STX1A-212ENST00000494245 ANKRD24Q8TF21 1146 aa28.7■■■□□ 2.18
STX1A-212ENST00000494245 EVA1CP58658 441 aa28.69■■■□□ 2.18
STX1A-212ENST00000494245 UNC5CLQ8IV45 518 aa28.69■■■□□ 2.18
STX1A-212ENST00000494245 BCL9LQ86UU0 1499 aa28.69■■■□□ 2.18
STX1A-212ENST00000494245 USP21Q9UK80 565 aa28.68■■■□□ 2.18
STX1A-212ENST00000494245 WDR17Q8IZU2 1322 aa28.68■■■□□ 2.18
STX1A-212ENST00000494245 RGPD2P0DJD1 1756 aa28.67■■■□□ 2.18
STX1A-212ENST00000494245 DIAPH1O60610 1272 aaKnown RBP28.66■■■□□ 2.18
STX1A-212ENST00000494245 CSB-PGBD3P0DP91 1061 aa28.66■■■□□ 2.18
STX1A-212ENST00000494245 STRN4Q9NRL3 753 aa28.66■■■□□ 2.18
STX1A-212ENST00000494245 EIF4A2Q14240 407 aaKnown RBP28.65■■■□□ 2.18
STX1A-212ENST00000494245 LTV1Q96GA3 475 aaPredicted RBP28.65■■■□□ 2.18
STX1A-212ENST00000494245 RGPD1P0DJD0 1748 aa28.64■■■□□ 2.18
STX1A-212ENST00000494245 CRB1P82279 1406 aa28.64■■■□□ 2.18
STX1A-212ENST00000494245 ZNF772Q68DY9 489 aaPredicted RBP28.63■■■□□ 2.17
STX1A-212ENST00000494245 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
STX1A-212ENST00000494245 IL13P35225 146 aa28.61■■■□□ 2.17
STX1A-212ENST00000494245 VPS72Q15906 364 aa28.61■■■□□ 2.17
STX1A-212ENST00000494245 TOM1L2Q6ZVM7 507 aa28.61■■■□□ 2.17
STX1A-212ENST00000494245 ATRNO75882 1429 aa28.6■■■□□ 2.17
STX1A-212ENST00000494245 LARP1Q6PKG0 1096 aaKnown RBP28.6■■■□□ 2.17
STX1A-212ENST00000494245 PHF23Q9BUL5 403 aaPredicted RBP28.6■■■□□ 2.17
STX1A-212ENST00000494245 TRPC5Q9UL62 973 aaPredicted RBP28.6■■■□□ 2.17
STX1A-212ENST00000494245 CCER2I3L3R5 266 aa28.59■■■□□ 2.17
STX1A-212ENST00000494245 WNK3Q9BYP7 1800 aa28.58■■■□□ 2.17
STX1A-212ENST00000494245 CARD10Q9BWT7 1032 aa28.58■■■□□ 2.17
STX1A-212ENST00000494245 NLRP2Q9NX02 1062 aa28.58■■■□□ 2.17
STX1A-212ENST00000494245 MIER1Q8N108 512 aa28.57■■■□□ 2.16
STX1A-212ENST00000494245 NCAPD2Q15021 1401 aa28.57■■■□□ 2.16
STX1A-212ENST00000494245 IGSF1Q8N6C5 1336 aa28.56■■■□□ 2.16
STX1A-212ENST00000494245 MRS2Q9HD23 443 aa28.56■■■□□ 2.16
STX1A-212ENST00000494245 SPATA31A5Q5VU36 1347 aa28.55■■■□□ 2.16
STX1A-212ENST00000494245 SPATA31A7Q8IWB4 1347 aa28.55■■■□□ 2.16
STX1A-212ENST00000494245 EYA1Q99502 592 aa28.55■■■□□ 2.16
STX1A-212ENST00000494245 CCDC9Q9Y3X0 531 aaKnown RBP28.55■■■□□ 2.16
STX1A-212ENST00000494245 SPATA31A1Q5TZJ5 1347 aa28.54■■■□□ 2.16
STX1A-212ENST00000494245 NBPF6Q5VWK0 638 aa28.54■■■□□ 2.16
STX1A-212ENST00000494245 NBPF4Q96M43 638 aa28.54■■■□□ 2.16
STX1A-212ENST00000494245 THRAP3Q9Y2W1 955 aaKnown RBP28.54■■■□□ 2.16
STX1A-212ENST00000494245 QTRT2Q9H974 415 aaKnown RBP28.53■■■□□ 2.16
STX1A-212ENST00000494245 U2SURPO15042 1029 aaKnown RBP28.52■■■□□ 2.16
STX1A-212ENST00000494245 PARP4Q9UKK3 1724 aaKnown RBP28.52■■■□□ 2.16
STX1A-212ENST00000494245 GLI3P10071 1580 aa28.51■■■□□ 2.15
STX1A-212ENST00000494245 WDR43Q15061 677 aaKnown RBP eCLIP28.5■■■□□ 2.15
STX1A-212ENST00000494245 CCDC184Q52MB2 194 aa28.5■■■□□ 2.15
STX1A-212ENST00000494245 TCP11L2Q8N4U5 519 aa28.5■■■□□ 2.15
STX1A-212ENST00000494245 GJD4Q96KN9 370 aaPredicted RBP28.49■■■□□ 2.15
STX1A-212ENST00000494245 KDRP35968 1356 aa28.49■■■□□ 2.15
STX1A-212ENST00000494245 U2AF1L5P0DN76 240 aaPredicted RBP28.48■■■□□ 2.15
STX1A-212ENST00000494245 U2AF1Q01081 240 aaKnown RBP eCLIP28.48■■■□□ 2.15
STX1A-212ENST00000494245 PLEKHG2Q9H7P9 1386 aa28.48■■■□□ 2.15
STX1A-212ENST00000494245 USHBP1Q8N6Y0 703 aa28.47■■■□□ 2.15
STX1A-212ENST00000494245 USP35Q9P2H5 1018 aa28.47■■■□□ 2.15
STX1A-212ENST00000494245 SULT6B1Q6IMI4 303 aa28.46■■■□□ 2.15
STX1A-212ENST00000494245 BARGINQ6ZT62 677 aa28.46■■■□□ 2.15
STX1A-212ENST00000494245 CDCA7Q9BWT1 371 aaPredicted RBP28.46■■■□□ 2.15
STX1A-212ENST00000494245 RGS17Q9UGC6 210 aaPredicted RBP28.46■■■□□ 2.15
STX1A-212ENST00000494245 RBM6P78332 1123 aaKnown RBP28.44■■■□□ 2.14
STX1A-212ENST00000494245 RAPGEF4Q8WZA2 1011 aa28.44■■■□□ 2.14
STX1A-212ENST00000494245 DISP2A7MBM2 1401 aa28.43■■■□□ 2.14
STX1A-212ENST00000494245 THSD7AQ9UPZ6 1657 aa28.43■■■□□ 2.14
STX1A-212ENST00000494245 IL2RBP14784 551 aa28.43■■■□□ 2.14
STX1A-212ENST00000494245 PNNQ9H307 717 aaKnown RBP28.43■■■□□ 2.14
STX1A-212ENST00000494245 FCHSD2O94868 740 aa28.42■■■□□ 2.14
STX1A-212ENST00000494245 HMOX1P09601 288 aa28.42■■■□□ 2.14
STX1A-212ENST00000494245 TATP17735 454 aaPredicted RBP28.42■■■□□ 2.14
STX1A-212ENST00000494245 PNISRQ8TF01 805 aaKnown RBP28.42■■■□□ 2.14
STX1A-212ENST00000494245 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
STX1A-212ENST00000494245 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
STX1A-212ENST00000494245 MEGF6O75095 1541 aa28.4■■■□□ 2.14
STX1A-212ENST00000494245 OVOS2A0A0G2JMS6 1433 aa28.39■■■□□ 2.14
STX1A-212ENST00000494245 RXRBP28702 533 aa28.39■■■□□ 2.14
STX1A-212ENST00000494245 RSPH6AQ9H0K4 717 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms