RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 GJA5P36382 358 aa8.62□□□□□ -1.03
CPSF7-213ENST00000494016 KCNC4Q03721 635 aa8.62□□□□□ -1.03
CPSF7-213ENST00000494016 ZNF516Q92618 1163 aa8.62□□□□□ -1.03
CPSF7-213ENST00000494016 CFDP1Q9UEE9 299 aaPredicted RBP8.62□□□□□ -1.03
CPSF7-213ENST00000494016 LCE2BO14633 110 aa8.61□□□□□ -1.03
CPSF7-213ENST00000494016 SPTLC1O15269 473 aa8.61□□□□□ -1.03
CPSF7-213ENST00000494016 GFRA3O60609 400 aa8.61□□□□□ -1.03
CPSF7-213ENST00000494016 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-213ENST00000494016 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
CPSF7-213ENST00000494016 CDC42BPAQ5VT25 1732 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 ITSN2Q9NZM3 1697 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 FDX1P10109 184 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 GUCA2AQ02747 115 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 SH3D19Q5HYK7 790 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 MPHOSPH9Q99550 1183 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 ABCA9Q8IUA7 1624 aa8.6□□□□□ -1.03
CPSF7-213ENST00000494016 CAMSAP2Q08AD1 1489 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 TEX14Q8IWB6 1497 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 Q3C1V9 767 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 FBXO41Q8TF61 875 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 TRIM52Q96A61 297 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 THAP11Q96EK4 314 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
CPSF7-213ENST00000494016 ADGRL1O94910 1474 aa8.58□□□□□ -1.04
CPSF7-213ENST00000494016 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
CPSF7-213ENST00000494016 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
CPSF7-213ENST00000494016 TUSC1Q2TAM9 212 aa8.58□□□□□ -1.04
CPSF7-213ENST00000494016 BRICD5Q6PL45 260 aa8.58□□□□□ -1.04
CPSF7-213ENST00000494016 GOPCQ9HD26 462 aa8.58□□□□□ -1.04
CPSF7-213ENST00000494016 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
CPSF7-213ENST00000494016 ZNF777Q9ULD5 760 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-213ENST00000494016 NCOA1Q15788 1441 aa8.57□□□□□ -1.04
CPSF7-213ENST00000494016 TLL1O43897 1013 aa8.57□□□□□ -1.04
CPSF7-213ENST00000494016 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-213ENST00000494016 CLK2P49760 499 aaKnown RBP8.57□□□□□ -1.04
CPSF7-213ENST00000494016 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 HECW2Q9P2P5 1572 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 CD109Q6YHK3 1445 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 ADH1BP00325 375 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 NKX2-3Q8TAU0 364 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 SPSB2Q99619 263 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 ADGRL2O95490 1459 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
CPSF7-213ENST00000494016 CDC42BPBQ9Y5S2 1711 aa8.55□□□□□ -1.04
CPSF7-213ENST00000494016 TONSLQ96HA7 1378 aa8.54□□□□□ -1.04
CPSF7-213ENST00000494016 ANKRD30BQ9BXX2 1392 aa8.54□□□□□ -1.04
CPSF7-213ENST00000494016 HNRNPMP52272 730 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPSF7-213ENST00000494016 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
CPSF7-213ENST00000494016 MBD5Q9P267 1494 aa8.53□□□□□ -1.04
CPSF7-213ENST00000494016 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
CPSF7-213ENST00000494016 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-213ENST00000494016 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
CPSF7-213ENST00000494016 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
CPSF7-213ENST00000494016 PZPP20742 1482 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 ANKRD30AQ9BXX3 1397 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 SPDYE5A6NIY4 337 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 LILRB3O75022 631 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 MTMR2Q13614 643 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 FAM160A2Q8N612 972 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-213ENST00000494016 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPSF7-213ENST00000494016 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.52□□□□□ -1.05
CPSF7-213ENST00000494016 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.05
CPSF7-213ENST00000494016 ARAP3Q8WWN8 1544 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 QPCTQ16769 361 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 CSPP1Q1MSJ5 1256 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 L3MBTL2Q969R5 705 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 PCMTD1Q96MG8 357 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-213ENST00000494016 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-213ENST00000494016 SLC6A16Q9GZN6 736 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 SAMD9LQ8IVG5 1584 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 RICTORQ6R327 1708 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 PREX2Q70Z35 1606 aa8.51□□□□□ -1.05
CPSF7-213ENST00000494016 TSPY4P0CV99 314 aa8.5□□□□□ -1.05
CPSF7-213ENST00000494016 TSPY10P0CW01 314 aa8.5□□□□□ -1.05
CPSF7-213ENST00000494016 C9orf84Q5VXU9 1444 aa8.5□□□□□ -1.05
CPSF7-213ENST00000494016 CABLES1Q8TDN4 633 aa8.5□□□□□ -1.05
CPSF7-213ENST00000494016 SIGLEC1Q9BZZ2 1709 aa8.49□□□□□ -1.05
CPSF7-213ENST00000494016 CFAP74Q9C0B2 1584 aa8.49□□□□□ -1.05
CPSF7-213ENST00000494016 CENPBP07199 599 aaPredicted RBP8.49□□□□□ -1.05
CPSF7-213ENST00000494016 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
CPSF7-213ENST00000494016 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
CPSF7-213ENST00000494016 ARHGEF40Q8TER5 1519 aa8.49□□□□□ -1.05
CPSF7-213ENST00000494016 ANKRD50Q9ULJ7 1429 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 NRG2O14511 850 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-213ENST00000494016 S1PR4O95977 384 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 MMP16P51512 607 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 NBPF8Q3BBV2 869 aa8.48□□□□□ -1.05
CPSF7-213ENST00000494016 PPP2R2DQ66LE6 453 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms