RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CRB1P82279 1406 aa31.53■■■□□ 2.64
SNIP1-203ENST00000493916 A0A0G2JS52 829 aa31.53■■■□□ 2.64
SNIP1-203ENST00000493916 MYT1Q01538 1121 aa31.53■■■□□ 2.64
SNIP1-203ENST00000493916 KRT27Q7Z3Y8 459 aa31.53■■■□□ 2.64
SNIP1-203ENST00000493916 BARGINQ6ZT62 677 aa31.52■■■□□ 2.64
SNIP1-203ENST00000493916 AXIN2Q9Y2T1 843 aa31.51■■■□□ 2.63
SNIP1-203ENST00000493916 THRAP3Q9Y2W1 955 aaKnown RBP31.5■■■□□ 2.63
SNIP1-203ENST00000493916 TCP11L2Q8N4U5 519 aa31.49■■■□□ 2.63
SNIP1-203ENST00000493916 USP35Q9P2H5 1018 aa31.49■■■□□ 2.63
SNIP1-203ENST00000493916 LTN1O94822 1766 aa31.48■■■□□ 2.63
SNIP1-203ENST00000493916 WDR17Q8IZU2 1322 aa31.48■■■□□ 2.63
SNIP1-203ENST00000493916 CCDC125Q86Z20 511 aa31.47■■■□□ 2.63
SNIP1-203ENST00000493916 COG3Q96JB2 828 aa31.46■■■□□ 2.63
SNIP1-203ENST00000493916 RGPD5Q99666 1765 aa31.45■■■□□ 2.63
SNIP1-203ENST00000493916 BLMP54132 1417 aaPredicted RBP31.43■■■□□ 2.62
SNIP1-203ENST00000493916 KIF20BQ96Q89 1820 aa31.42■■■□□ 2.62
SNIP1-203ENST00000493916 PARP4Q9UKK3 1724 aaKnown RBP31.41■■■□□ 2.62
SNIP1-203ENST00000493916 FYB1O15117 783 aa31.41■■■□□ 2.62
SNIP1-203ENST00000493916 TOM1L2Q6ZVM7 507 aa31.41■■■□□ 2.62
SNIP1-203ENST00000493916 NSD3Q9BZ95 1437 aa31.41■■■□□ 2.62
SNIP1-203ENST00000493916 CARD14Q9BXL6 1004 aa31.4■■■□□ 2.62
SNIP1-203ENST00000493916 WNK3Q9BYP7 1800 aa31.39■■■□□ 2.62
SNIP1-203ENST00000493916 CARD10Q9BWT7 1032 aa31.37■■■□□ 2.61
SNIP1-203ENST00000493916 ERBB3P21860 1342 aa31.37■■■□□ 2.61
SNIP1-203ENST00000493916 CSB-PGBD3P0DP91 1061 aa31.36■■■□□ 2.61
SNIP1-203ENST00000493916 GGNBP2Q9H3C7 697 aa31.36■■■□□ 2.61
SNIP1-203ENST00000493916 POLR3GLQ9BT43 218 aa31.34■■■□□ 2.61
SNIP1-203ENST00000493916 LRRC37A3O60309 1634 aa31.34■■■□□ 2.61
SNIP1-203ENST00000493916 CCDC7Q96M83 1385 aa31.33■■■□□ 2.61
SNIP1-203ENST00000493916 IP6K1Q92551 441 aa31.33■■■□□ 2.61
SNIP1-203ENST00000493916 MAP3K19Q56UN5 1328 aa31.32■■■□□ 2.6
SNIP1-203ENST00000493916 PDE3BQ13370 1112 aa31.31■■■□□ 2.6
SNIP1-203ENST00000493916 FAM182BQ5T319 152 aa31.31■■■□□ 2.6
SNIP1-203ENST00000493916 CDCA7Q9BWT1 371 aaPredicted RBP31.31■■■□□ 2.6
SNIP1-203ENST00000493916 DISP2A7MBM2 1401 aa31.31■■■□□ 2.6
SNIP1-203ENST00000493916 RTL1A6NKG5 1358 aa31.3■■■□□ 2.6
SNIP1-203ENST00000493916 RGPD1P0DJD0 1748 aa31.3■■■□□ 2.6
SNIP1-203ENST00000493916 C11orf95C9JLR9 678 aaPredicted RBP31.29■■■□□ 2.6
SNIP1-203ENST00000493916 SF3B2Q13435 895 aaKnown RBP31.29■■■□□ 2.6
SNIP1-203ENST00000493916 ANKRD24Q8TF21 1146 aa31.29■■■□□ 2.6
SNIP1-203ENST00000493916 FAM208AQ9UK61 1670 aaKnown RBP31.29■■■□□ 2.6
SNIP1-203ENST00000493916 CGNL1Q0VF96 1302 aa31.28■■■□□ 2.6
SNIP1-203ENST00000493916 FAM196AQ6ZSG2 479 aa31.28■■■□□ 2.6
SNIP1-203ENST00000493916 FBLN1P23142 703 aa31.26■■■□□ 2.59
SNIP1-203ENST00000493916 HOXC9P31274 260 aa31.26■■■□□ 2.59
SNIP1-203ENST00000493916 TNS1Q9HBL0 1735 aaKnown RBP31.24■■■□□ 2.59
SNIP1-203ENST00000493916 AMPHP49418 695 aa31.24■■■□□ 2.59
SNIP1-203ENST00000493916 DDB1Q16531 1140 aa31.24■■■□□ 2.59
SNIP1-203ENST00000493916 NLRP2Q9NX02 1062 aa31.24■■■□□ 2.59
SNIP1-203ENST00000493916 RRS1Q15050 365 aaKnown RBP31.23■■■□□ 2.59
SNIP1-203ENST00000493916 PEAK1Q9H792 1746 aa31.23■■■□□ 2.59
SNIP1-203ENST00000493916 KIF24Q5T7B8 1368 aa31.22■■■□□ 2.59
SNIP1-203ENST00000493916 PANK3Q9H999 370 aa31.22■■■□□ 2.59
SNIP1-203ENST00000493916 ANKRD26Q9UPS8 1709 aa31.21■■■□□ 2.59
SNIP1-203ENST00000493916 OVOS2A0A0G2JMS6 1433 aa31.21■■■□□ 2.59
SNIP1-203ENST00000493916 KIF7Q2M1P5 1343 aa31.21■■■□□ 2.59
SNIP1-203ENST00000493916 DEFB132Q7Z7B7 95 aa31.2■■■□□ 2.59
SNIP1-203ENST00000493916 TNS2Q63HR2 1409 aa31.19■■■□□ 2.58
SNIP1-203ENST00000493916 BAG6P46379 1132 aa31.18■■■□□ 2.58
SNIP1-203ENST00000493916 FLT4P35916 1363 aa31.17■■■□□ 2.58
SNIP1-203ENST00000493916 LTV1Q96GA3 475 aaPredicted RBP31.16■■■□□ 2.58
SNIP1-203ENST00000493916 NSD2O96028 1365 aa31.16■■■□□ 2.58
SNIP1-203ENST00000493916 BCL9O00512 1426 aa31.15■■■□□ 2.58
SNIP1-203ENST00000493916 TRIM37O94972 964 aa31.15■■■□□ 2.58
SNIP1-203ENST00000493916 INSRP06213 1382 aa31.15■■■□□ 2.58
SNIP1-203ENST00000493916 IL2RBP14784 551 aa31.14■■■□□ 2.58
SNIP1-203ENST00000493916 SMG6Q86US8 1419 aaKnown RBP31.14■■■□□ 2.58
SNIP1-203ENST00000493916 EXOC5O00471 708 aa31.13■■■□□ 2.57
SNIP1-203ENST00000493916 MARCH10Q8NA82 808 aaPredicted RBP31.12■■■□□ 2.57
SNIP1-203ENST00000493916 EMILIN1Q9Y6C2 1016 aa31.1■■■□□ 2.57
SNIP1-203ENST00000493916 HSP90AB2PQ58FF8 381 aa31.09■■■□□ 2.57
SNIP1-203ENST00000493916 RGPD2P0DJD1 1756 aa31.09■■■□□ 2.57
SNIP1-203ENST00000493916 SBF2Q86WG5 1849 aa31.08■■■□□ 2.57
SNIP1-203ENST00000493916 EN1Q05925 392 aaPredicted RBP31.06■■■□□ 2.56
SNIP1-203ENST00000493916 PARD3Q8TEW0 1356 aa31.05■■■□□ 2.56
SNIP1-203ENST00000493916 KNSTRNQ9Y448 316 aa31.05■■■□□ 2.56
SNIP1-203ENST00000493916 MAP2P11137 1827 aaKnown RBP31.05■■■□□ 2.56
SNIP1-203ENST00000493916 APBA3O96018 575 aa31.04■■■□□ 2.56
SNIP1-203ENST00000493916 NBPF6Q5VWK0 638 aa31.04■■■□□ 2.56
SNIP1-203ENST00000493916 NBPF4Q96M43 638 aa31.04■■■□□ 2.56
SNIP1-203ENST00000493916 WASHC2AQ641Q2 1341 aa31.03■■■□□ 2.56
SNIP1-203ENST00000493916 POLKQ9UBT6 870 aa31.03■■■□□ 2.56
SNIP1-203ENST00000493916 CAMKK2Q96RR4 588 aa31.02■■■□□ 2.56
SNIP1-203ENST00000493916 MEGF6O75095 1541 aa31.02■■■□□ 2.56
SNIP1-203ENST00000493916 PPM1GO15355 546 aaPredicted RBP31■■■□□ 2.55
SNIP1-203ENST00000493916 RGPD3A6NKT7 1758 aaPredicted RBP31■■■□□ 2.55
SNIP1-203ENST00000493916 RGPD4Q7Z3J3 1758 aa31■■■□□ 2.55
SNIP1-203ENST00000493916 TNNT2P45379 298 aaPredicted RBP30.99■■■□□ 2.55
SNIP1-203ENST00000493916 EZH2Q15910 746 aaKnown RBP30.99■■■□□ 2.55
SNIP1-203ENST00000493916 AMER1Q5JTC6 1135 aaPredicted RBP30.99■■■□□ 2.55
SNIP1-203ENST00000493916 BCL11BQ9C0K0 894 aaPredicted RBP30.99■■■□□ 2.55
SNIP1-203ENST00000493916 RREB1Q92766 1687 aa30.99■■■□□ 2.55
SNIP1-203ENST00000493916 NCAPD2Q15021 1401 aa30.98■■■□□ 2.55
SNIP1-203ENST00000493916 MORC1Q86VD1 984 aa30.97■■■□□ 2.55
SNIP1-203ENST00000493916 NHSQ6T4R5 1651 aa30.97■■■□□ 2.55
SNIP1-203ENST00000493916 USHBP1Q8N6Y0 703 aa30.96■■■□□ 2.55
SNIP1-203ENST00000493916 SHANK3Q9BYB0 1731 aa30.95■■■□□ 2.55
SNIP1-203ENST00000493916 PER1O15534 1290 aaPredicted RBP30.95■■■□□ 2.55
SNIP1-203ENST00000493916 PLSCR1O15162 318 aa30.92■■■□□ 2.54
SNIP1-203ENST00000493916 PTF1AQ7RTS3 328 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms