RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, human

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT6A-208	ENST00000493855	PIK3CD	O00329	1044 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	BRD1	O95696	1058 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	RASA1	P20936	1047 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	ATP1A2	P50993	1020 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	PSME1	Q06323	249 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	KCNA1	Q09470	495 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	PLEKHM2	Q8IWE5	1019 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	DEPDC4	Q8N2C3	294 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	ZNF511	Q8NB15	262 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	BAP1	Q92560	729 aa		5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	MKRN1	Q9UHC7	482 aa	Known RBP	5.24	□□□□□ -1.57
CCT6A-208	ENST00000493855	NCOA4	Q13772	614 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	OXLD1	Q5BKU9	147 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	TMCO4	Q5TGY1	634 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	SH3BP5L	Q7L8J4	393 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	CCDC125	Q86Z20	511 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	NOVA2	Q9UNW9	492 aa	Known RBP	5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	NOD1	Q9Y239	953 aa		5.23	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L15	C9J2P7	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L10	C9JJH3	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L13	C9JLJ4	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L12	C9JPN9	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L11	C9JVI0	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L21	D6R901	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L18	D6R9N7	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L22	D6RA61	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L17	D6RBQ6	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L19	D6RCP7	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L20	D6RJB6	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	USP17L24	Q0WX57	530 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	PTCRA	Q6ISU1	281 aa	Predicted RBP	5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	NKX2-3	Q8TAU0	364 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	FAM174A	Q8TBP5	190 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	FAM200A	Q8TCP9	573 aa		5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	RNF166	Q96A37	237 aa	Predicted RBP	5.22	□□□□□ -1.57
CCT6A-208	ENST00000493855	FAM196B	A6NMK8	535 aa		5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	MYC	P01106	439 aa	Predicted RBP	5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	RAB15	P59190	212 aa		5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	ELOA	Q14241	798 aa	Known RBP	5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	ERFE	Q4G0M1	354 aa		5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	FOXJ1	Q92949	421 aa		5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	GZF1	Q9H116	711 aa	Predicted RBP	5.21	□□□□□ -1.58
CCT6A-208	ENST00000493855	SEPT12	Q8IYM1	358 aa		5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	OGFOD1	Q8N543	542 aa		5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	ZNF594	Q96JF6	807 aa	Predicted RBP	5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	DNAAF2	Q9NVR5	837 aa	Known RBP	5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	MTMR7	Q9Y216	660 aa		5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	PCDHB11	Q9Y5F2	797 aa		5.2	□□□□□ -1.58
CCT6A-208	ENST00000493855	CD2BP2	O95400	341 aa	Known RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	VARS	P26640	1264 aa	Known RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	WNT7B	P56706	349 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	SRPK2	P78362	688 aa	Known RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	TRIM32	Q13049	653 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	USP4	Q13107	963 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	ARID5B	Q14865	1188 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	KANK4	Q5T7N3	995 aa	Predicted RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	VASH1	Q7L8A9	365 aa	Predicted RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	SH3RF1	Q7Z6J0	888 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	ANKMY2	Q8IV38	441 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	ANKLE1	Q8NAG6	615 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	EHBP1	Q8NDI1	1231 aa		5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	CCER1	Q8TC90	406 aa	Predicted RBP	5.19	□□□□□ -1.58
CCT6A-208	ENST00000493855	PPEF1	O14829	653 aa	Predicted RBP	5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	GIGYF1	O75420	1035 aa	Predicted RBP	5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	SH3BP2	P78314	561 aa		5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	GTF2I	P78347	998 aa		5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	OCSTAMP	Q9BR26	566 aa		5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	CDCA7	Q9BWT1	371 aa	Predicted RBP	5.18	□□□□□ -1.58
CCT6A-208	ENST00000493855	RNF223	E7ERA6	249 aa		5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	ITGBL1	O95965	494 aa	Predicted RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	RPIA	P49247	311 aa		5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	DHX9	Q08211	1270 aa	Known RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	CRTC2	Q53ET0	693 aa	Predicted RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	TMEM164	Q5U3C3	297 aa		5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	TRMT44	Q8IYL2	757 aa	Known RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	LARGE2	Q8N3Y3	721 aa		5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	STK32A	Q8WU08	396 aa		5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	KCTD15	Q96SI1	283 aa	Predicted RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	5.17	□□□□□ -1.58
CCT6A-208	ENST00000493855	SEC13	P55735	322 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	DPYD	Q12882	1025 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	PTK7	Q13308	1070 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	SWI5	Q1ZZU3	235 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	PHTF2	Q8N3S3	785 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	TPCN2	Q8NHX9	752 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	C1QTNF2	Q9BXJ5	285 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	ZMIZ1	Q9ULJ6	1067 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	IVNS1ABP	Q9Y6Y0	642 aa		5.16	□□□□□ -1.58
CCT6A-208	ENST00000493855	CARNS1	A5YM72	827 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	TMEM88B	A6NKF7	163 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	CCDC102B	Q68D86	513 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	TRAF7	Q6Q0C0	670 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	HINFP	Q9BQA5	517 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	MAP4K5	Q9Y4K4	846 aa		5.15	□□□□□ -1.59
CCT6A-208	ENST00000493855	ATP2B4	P23634	1241 aa		5.14	□□□□□ -1.59
CCT6A-208	ENST00000493855	FSHR	P23945	695 aa		5.14	□□□□□ -1.59
CCT6A-208	ENST00000493855	ARID4A	P29374	1257 aa	Predicted RBP	5.14	□□□□□ -1.59
CCT6A-208	ENST00000493855	MFAP1	P55081	439 aa	Known RBP	5.14	□□□□□ -1.59
CCT6A-208	ENST00000493855	C4orf48	Q5BLP8	95 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms