RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 POLKQ9UBT6 870 aa24.33■■□□□ 1.49
PDLIM7-208ENST00000493815 LMO7Q8WWI1 1683 aa24.32■■□□□ 1.48
PDLIM7-208ENST00000493815 COL18A1P39060 1754 aa24.32■■□□□ 1.48
PDLIM7-208ENST00000493815 ZNF772Q68DY9 489 aaPredicted RBP24.31■■□□□ 1.48
PDLIM7-208ENST00000493815 HOXC9P31274 260 aa24.3■■□□□ 1.48
PDLIM7-208ENST00000493815 EVA1CP58658 441 aa24.3■■□□□ 1.48
PDLIM7-208ENST00000493815 POTEAQ6S8J7 498 aa24.3■■□□□ 1.48
PDLIM7-208ENST00000493815 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
PDLIM7-208ENST00000493815 IP6K1Q92551 441 aa24.3■■□□□ 1.48
PDLIM7-208ENST00000493815 HSP90AB2PQ58FF8 381 aa24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 LARP1Q6PKG0 1096 aaKnown RBP24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 LTV1Q96GA3 475 aaPredicted RBP24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 CCDC9Q9Y3X0 531 aaKnown RBP24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 COL5A2P05997 1499 aaPredicted RBP24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 PEAK1Q9H792 1746 aa24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 NWD2Q9ULI1 1742 aa24.28■■□□□ 1.48
PDLIM7-208ENST00000493815 RGPD5Q99666 1765 aa24.27■■□□□ 1.48
PDLIM7-208ENST00000493815 TRPC5Q9UL62 973 aaPredicted RBP24.27■■□□□ 1.48
PDLIM7-208ENST00000493815 NRAPQ86VF7 1730 aa24.27■■□□□ 1.48
PDLIM7-208ENST00000493815 MAP2P11137 1827 aaKnown RBP24.27■■□□□ 1.48
PDLIM7-208ENST00000493815 ATRNO75882 1429 aa24.25■■□□□ 1.47
PDLIM7-208ENST00000493815 FLT4P35916 1363 aa24.25■■□□□ 1.47
PDLIM7-208ENST00000493815 CSB-PGBD3P0DP91 1061 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 ANKRD24Q8TF21 1146 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 USP35Q9P2H5 1018 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 RTL1A6NKG5 1358 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 MTHFSP49914 203 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 VPS72Q15906 364 aa24.24■■□□□ 1.47
PDLIM7-208ENST00000493815 ERBB3P21860 1342 aa24.23■■□□□ 1.47
PDLIM7-208ENST00000493815 PARD3Q8TEW0 1356 aa24.22■■□□□ 1.47
PDLIM7-208ENST00000493815 ABCC6O95255 1503 aa24.22■■□□□ 1.47
PDLIM7-208ENST00000493815 BLMP54132 1417 aaPredicted RBP24.22■■□□□ 1.47
PDLIM7-208ENST00000493815 WDR17Q8IZU2 1322 aa24.22■■□□□ 1.47
PDLIM7-208ENST00000493815 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.22■■□□□ 1.47
PDLIM7-208ENST00000493815 TOM1L2Q6ZVM7 507 aa24.21■■□□□ 1.47
PDLIM7-208ENST00000493815 GJD4Q96KN9 370 aaPredicted RBP24.21■■□□□ 1.47
PDLIM7-208ENST00000493815 PPP2R1AP30153 589 aa24.21■■□□□ 1.47
PDLIM7-208ENST00000493815 INSRP06213 1382 aa24.2■■□□□ 1.47
PDLIM7-208ENST00000493815 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.46
PDLIM7-208ENST00000493815 KIF24Q5T7B8 1368 aa24.2■■□□□ 1.46
PDLIM7-208ENST00000493815 SPATA31A5Q5VU36 1347 aa24.19■■□□□ 1.46
PDLIM7-208ENST00000493815 SPATA31A7Q8IWB4 1347 aa24.19■■□□□ 1.46
PDLIM7-208ENST00000493815 NLRP2Q9NX02 1062 aa24.19■■□□□ 1.46
PDLIM7-208ENST00000493815 RXRBP28702 533 aa24.18■■□□□ 1.46
PDLIM7-208ENST00000493815 SPATA31A1Q5TZJ5 1347 aa24.18■■□□□ 1.46
PDLIM7-208ENST00000493815 CRB1P82279 1406 aa24.17■■□□□ 1.46
PDLIM7-208ENST00000493815 RBM6P78332 1123 aaKnown RBP24.17■■□□□ 1.46
PDLIM7-208ENST00000493815 RALBP1Q15311 655 aa24.16■■□□□ 1.46
PDLIM7-208ENST00000493815 PRKRIP1Q9H875 184 aaPredicted RBP24.16■■□□□ 1.46
PDLIM7-208ENST00000493815 GLI3P10071 1580 aa24.16■■□□□ 1.46
PDLIM7-208ENST00000493815 CDK12Q9NYV4 1490 aaPredicted RBP24.15■■□□□ 1.46
PDLIM7-208ENST00000493815 EIF4A2Q14240 407 aaKnown RBP24.15■■□□□ 1.46
PDLIM7-208ENST00000493815 FAM98CQ17RN3 349 aaKnown RBP24.15■■□□□ 1.46
PDLIM7-208ENST00000493815 NBPF6Q5VWK0 638 aa24.14■■□□□ 1.45
PDLIM7-208ENST00000493815 USHBP1Q8N6Y0 703 aa24.14■■□□□ 1.45
PDLIM7-208ENST00000493815 NBPF4Q96M43 638 aa24.14■■□□□ 1.45
PDLIM7-208ENST00000493815 TCP11L2Q8N4U5 519 aa24.13■■□□□ 1.45
PDLIM7-208ENST00000493815 CARD10Q9BWT7 1032 aa24.13■■□□□ 1.45
PDLIM7-208ENST00000493815 A0A0G2JS52 829 aa24.11■■□□□ 1.45
PDLIM7-208ENST00000493815 MYT1Q01538 1121 aa24.11■■□□□ 1.45
PDLIM7-208ENST00000493815 RGPD2P0DJD1 1756 aa24.1■■□□□ 1.45
PDLIM7-208ENST00000493815 EYA1Q99502 592 aa24.09■■□□□ 1.45
PDLIM7-208ENST00000493815 MYBBP1AQ9BQG0 1328 aaKnown RBP24.09■■□□□ 1.45
PDLIM7-208ENST00000493815 IL13P35225 146 aa24.08■■□□□ 1.45
PDLIM7-208ENST00000493815 ANP32CO43423 234 aa24.08■■□□□ 1.44
PDLIM7-208ENST00000493815 DIAPH1O60610 1272 aaKnown RBP24.07■■□□□ 1.44
PDLIM7-208ENST00000493815 COL3A1P02461 1466 aaPredicted RBP24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 RGS12O14924 1447 aa24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 BARGINQ6ZT62 677 aa24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 SEPT12Q8IYM1 358 aa24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 CFAP53Q96M91 514 aa24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 THRAP3Q9Y2W1 955 aaKnown RBP24.06■■□□□ 1.44
PDLIM7-208ENST00000493815 ILDR2Q71H61 639 aa24.05■■□□□ 1.44
PDLIM7-208ENST00000493815 ONECUT3O60422 494 aaPredicted RBP24.05■■□□□ 1.44
PDLIM7-208ENST00000493815 FAM208AQ9UK61 1670 aaKnown RBP24.04■■□□□ 1.44
PDLIM7-208ENST00000493815 IGSF1Q8N6C5 1336 aa24.02■■□□□ 1.44
PDLIM7-208ENST00000493815 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
PDLIM7-208ENST00000493815 DIEXFQ68CQ4 756 aaKnown RBP24.02■■□□□ 1.44
PDLIM7-208ENST00000493815 AEBP1Q8IUX7 1158 aa24.02■■□□□ 1.44
PDLIM7-208ENST00000493815 IL2RBP14784 551 aa24.01■■□□□ 1.43
PDLIM7-208ENST00000493815 DISP2A7MBM2 1401 aa24■■□□□ 1.43
PDLIM7-208ENST00000493815 HMOX1P09601 288 aa23.99■■□□□ 1.43
PDLIM7-208ENST00000493815 SULT6B1Q6IMI4 303 aa23.99■■□□□ 1.43
PDLIM7-208ENST00000493815 THSD7AQ9UPZ6 1657 aa23.99■■□□□ 1.43
PDLIM7-208ENST00000493815 MEGF6O75095 1541 aa23.99■■□□□ 1.43
PDLIM7-208ENST00000493815 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
PDLIM7-208ENST00000493815 RAPGEF4Q8WZA2 1011 aa23.98■■□□□ 1.43
PDLIM7-208ENST00000493815 NCAPD2Q15021 1401 aa23.97■■□□□ 1.43
PDLIM7-208ENST00000493815 DDB1Q16531 1140 aa23.96■■□□□ 1.43
PDLIM7-208ENST00000493815 FAM182BQ5T319 152 aa23.96■■□□□ 1.43
PDLIM7-208ENST00000493815 RGPD1P0DJD0 1748 aa23.96■■□□□ 1.43
PDLIM7-208ENST00000493815 CDCA7Q9BWT1 371 aaPredicted RBP23.95■■□□□ 1.43
PDLIM7-208ENST00000493815 WNK3Q9BYP7 1800 aa23.95■■□□□ 1.42
PDLIM7-208ENST00000493815 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
PDLIM7-208ENST00000493815 U2AF1L5P0DN76 240 aaPredicted RBP23.94■■□□□ 1.42
PDLIM7-208ENST00000493815 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
PDLIM7-208ENST00000493815 U2AF1Q01081 240 aaKnown RBP eCLIP23.94■■□□□ 1.424e-6■■□□□ 12.1
PDLIM7-208ENST00000493815 EXOC5O00471 708 aa23.93■■□□□ 1.42
PDLIM7-208ENST00000493815 KRT27Q7Z3Y8 459 aa23.93■■□□□ 1.42
PDLIM7-208ENST00000493815 BRWD3Q6RI45 1802 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms