RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
SNX17-208ENST00000493711 ARHGEF25Q86VW2 580 aa16.74■□□□□ 0.27
SNX17-208ENST00000493711 CABLES1Q8TDN4 633 aa16.74■□□□□ 0.27
SNX17-208ENST00000493711 CFAP53Q96M91 514 aa16.74■□□□□ 0.27
SNX17-208ENST00000493711 POLKQ9UBT6 870 aa16.74■□□□□ 0.27
SNX17-208ENST00000493711 RTL1A6NKG5 1358 aa16.74■□□□□ 0.27
SNX17-208ENST00000493711 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
SNX17-208ENST00000493711 SOX12O15370 315 aa16.73■□□□□ 0.27
SNX17-208ENST00000493711 AMPHP49418 695 aa16.73■□□□□ 0.27
SNX17-208ENST00000493711 MAP3K19Q56UN5 1328 aa16.72■□□□□ 0.27
SNX17-208ENST00000493711 MTHFSP49914 203 aa16.72■□□□□ 0.27
SNX17-208ENST00000493711 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
SNX17-208ENST00000493711 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
SNX17-208ENST00000493711 SMG6Q86US8 1419 aaKnown RBP16.71■□□□□ 0.27
SNX17-208ENST00000493711 NFAT5O94916 1531 aa16.71■□□□□ 0.27
SNX17-208ENST00000493711 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
SNX17-208ENST00000493711 PLEKHG5O94827 1062 aa16.71■□□□□ 0.27
SNX17-208ENST00000493711 FLT4P35916 1363 aa16.71■□□□□ 0.27
SNX17-208ENST00000493711 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
SNX17-208ENST00000493711 INSRP06213 1382 aa16.7■□□□□ 0.26
SNX17-208ENST00000493711 ZC3H6P61129 1189 aaKnown RBP16.7■□□□□ 0.26
SNX17-208ENST00000493711 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
SNX17-208ENST00000493711 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
SNX17-208ENST00000493711 IP6K1Q92551 441 aa16.7■□□□□ 0.26
SNX17-208ENST00000493711 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
SNX17-208ENST00000493711 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
SNX17-208ENST00000493711 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
SNX17-208ENST00000493711 PPM1GO15355 546 aaPredicted RBP16.69■□□□□ 0.26
SNX17-208ENST00000493711 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
SNX17-208ENST00000493711 EMILIN1Q9Y6C2 1016 aa16.69■□□□□ 0.26
SNX17-208ENST00000493711 ABCC6O95255 1503 aa16.69■□□□□ 0.26
SNX17-208ENST00000493711 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
SNX17-208ENST00000493711 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
SNX17-208ENST00000493711 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
SNX17-208ENST00000493711 FBLN1P23142 703 aa16.67■□□□□ 0.26
SNX17-208ENST00000493711 HOXC9P31274 260 aa16.67■□□□□ 0.26
SNX17-208ENST00000493711 MIER1Q8N108 512 aa16.67■□□□□ 0.26
SNX17-208ENST00000493711 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
SNX17-208ENST00000493711 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
SNX17-208ENST00000493711 PHRF1Q9P1Y6 1649 aaKnown RBP16.66■□□□□ 0.26
SNX17-208ENST00000493711 ADAMTS2O95450 1211 aa16.65■□□□□ 0.26
SNX17-208ENST00000493711 MARF1Q9Y4F3 1742 aaKnown RBP16.65■□□□□ 0.26
SNX17-208ENST00000493711 FAM83GA6ND36 823 aa16.64■□□□□ 0.25
SNX17-208ENST00000493711 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
SNX17-208ENST00000493711 RXRBP28702 533 aa16.64■□□□□ 0.25
SNX17-208ENST00000493711 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
SNX17-208ENST00000493711 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
SNX17-208ENST00000493711 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
SNX17-208ENST00000493711 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
SNX17-208ENST00000493711 HSP90AB2PQ58FF8 381 aa16.62■□□□□ 0.25
SNX17-208ENST00000493711 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
SNX17-208ENST00000493711 EVA1CP58658 441 aa16.61■□□□□ 0.25
SNX17-208ENST00000493711 LRP6O75581 1613 aa16.6■□□□□ 0.25
SNX17-208ENST00000493711 ABCA3Q99758 1704 aa16.6■□□□□ 0.25
SNX17-208ENST00000493711 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNX17-208ENST00000493711 FNBP4Q8N3X1 1017 aaPredicted RBP16.6■□□□□ 0.25
SNX17-208ENST00000493711 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
SNX17-208ENST00000493711 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
SNX17-208ENST00000493711 AXIN2Q9Y2T1 843 aa16.6■□□□□ 0.25
SNX17-208ENST00000493711 CSB-PGBD3P0DP91 1061 aa16.59■□□□□ 0.25
SNX17-208ENST00000493711 IL13P35225 146 aa16.59■□□□□ 0.25
SNX17-208ENST00000493711 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
SNX17-208ENST00000493711 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
SNX17-208ENST00000493711 ERBB3P21860 1342 aa16.59■□□□□ 0.25
SNX17-208ENST00000493711 POTEHQ6S545 545 aa16.58■□□□□ 0.24
SNX17-208ENST00000493711 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
SNX17-208ENST00000493711 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
SNX17-208ENST00000493711 COL14A1Q05707 1796 aaKnown RBP16.58■□□□□ 0.24
SNX17-208ENST00000493711 COL3A1P02461 1466 aaPredicted RBP16.57■□□□□ 0.24
SNX17-208ENST00000493711 UNC5CLQ8IV45 518 aa16.57■□□□□ 0.24
SNX17-208ENST00000493711 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
SNX17-208ENST00000493711 SLIT2O94813 1529 aa16.56■□□□□ 0.24
SNX17-208ENST00000493711 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
SNX17-208ENST00000493711 COL5A2P05997 1499 aaPredicted RBP16.55■□□□□ 0.24
SNX17-208ENST00000493711 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
SNX17-208ENST00000493711 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
SNX17-208ENST00000493711 NLRP2Q9NX02 1062 aa16.55■□□□□ 0.24
SNX17-208ENST00000493711 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
SNX17-208ENST00000493711 PEAK1Q9H792 1746 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 IGSF1Q8N6C5 1336 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 LMO7Q8WWI1 1683 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 FCHSD2O94868 740 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 U2AF1L5P0DN76 240 aaPredicted RBP16.54■□□□□ 0.24
SNX17-208ENST00000493711 U2AF1Q01081 240 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX17-208ENST00000493711 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 TOM1L2Q6ZVM7 507 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 CARD10Q9BWT7 1032 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 STRN4Q9NRL3 753 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 USP21Q9UK80 565 aa16.54■□□□□ 0.24
SNX17-208ENST00000493711 CCDC184Q52MB2 194 aa16.53■□□□□ 0.24
SNX17-208ENST00000493711 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
SNX17-208ENST00000493711 EYA1Q99502 592 aa16.53■□□□□ 0.24
SNX17-208ENST00000493711 CRB1P82279 1406 aa16.53■□□□□ 0.24
SNX17-208ENST00000493711 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
SNX17-208ENST00000493711 AFF2P51816 1311 aa16.52■□□□□ 0.24
SNX17-208ENST00000493711 COL18A1P39060 1754 aa16.52■□□□□ 0.24
SNX17-208ENST00000493711 NEFMP07197 916 aa16.52■□□□□ 0.24
SNX17-208ENST00000493711 VPS72Q15906 364 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms