RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
COL9A1-210ENST00000493682 DDB1Q16531 1140 aa24.86■■□□□ 1.57
COL9A1-210ENST00000493682 KCNH5Q8NCM2 988 aa24.86■■□□□ 1.57
COL9A1-210ENST00000493682 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
COL9A1-210ENST00000493682 AKAP12Q02952 1782 aa24.85■■□□□ 1.57
COL9A1-210ENST00000493682 SOX12O15370 315 aa24.84■■□□□ 1.57
COL9A1-210ENST00000493682 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
COL9A1-210ENST00000493682 MARCH10Q8NA82 808 aaPredicted RBP24.8■■□□□ 1.56
COL9A1-210ENST00000493682 CDCA7Q9BWT1 371 aaPredicted RBP24.8■■□□□ 1.56
COL9A1-210ENST00000493682 CARD10Q9BWT7 1032 aa24.8■■□□□ 1.56
COL9A1-210ENST00000493682 NFAT5O94916 1531 aa24.8■■□□□ 1.56
COL9A1-210ENST00000493682 WNK3Q9BYP7 1800 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 PLSCR1O15162 318 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 CSB-PGBD3P0DP91 1061 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 PTF1AQ7RTS3 328 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 RGPD5Q99666 1765 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
COL9A1-210ENST00000493682 BCL11BQ9C0K0 894 aaPredicted RBP24.78■■□□□ 1.56
COL9A1-210ENST00000493682 SBNO2Q9Y2G9 1366 aa24.78■■□□□ 1.56
COL9A1-210ENST00000493682 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
COL9A1-210ENST00000493682 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
COL9A1-210ENST00000493682 BCL9O00512 1426 aa24.76■■□□□ 1.55
COL9A1-210ENST00000493682 MON2Q7Z3U7 1717 aa24.75■■□□□ 1.55
COL9A1-210ENST00000493682 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.75■■□□□ 1.55
COL9A1-210ENST00000493682 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
COL9A1-210ENST00000493682 SPON1Q9HCB6 807 aa24.74■■□□□ 1.55
COL9A1-210ENST00000493682 ABCC6O95255 1503 aa24.73■■□□□ 1.55
COL9A1-210ENST00000493682 USP31Q70CQ4 1352 aa24.73■■□□□ 1.55
COL9A1-210ENST00000493682 CD163L1Q9NR16 1453 aa24.72■■□□□ 1.55
COL9A1-210ENST00000493682 CCDC7Q96M83 1385 aa24.72■■□□□ 1.55
COL9A1-210ENST00000493682 KCNQ2O43526 872 aa24.72■■□□□ 1.55
COL9A1-210ENST00000493682 ADRA2BP18089 450 aa24.72■■□□□ 1.55
COL9A1-210ENST00000493682 ANO8Q9HCE9 1232 aaPredicted RBP24.72■■□□□ 1.55
COL9A1-210ENST00000493682 EXOC5O00471 708 aa24.71■■□□□ 1.55
COL9A1-210ENST00000493682 NME9Q86XW9 330 aa24.71■■□□□ 1.55
COL9A1-210ENST00000493682 PROM2Q8N271 834 aa24.71■■□□□ 1.55
COL9A1-210ENST00000493682 TMC1Q8TDI8 760 aa24.7■■□□□ 1.54
COL9A1-210ENST00000493682 PPP1R1BQ9UD71 204 aaPredicted RBP24.69■■□□□ 1.54
COL9A1-210ENST00000493682 USP54Q70EL1 1684 aa24.69■■□□□ 1.54
COL9A1-210ENST00000493682 SLC12A5Q9H2X9 1139 aa24.68■■□□□ 1.54
COL9A1-210ENST00000493682 HDGFL2Q7Z4V5 671 aaPredicted RBP24.67■■□□□ 1.54
COL9A1-210ENST00000493682 TNS2Q63HR2 1409 aa24.67■■□□□ 1.54
COL9A1-210ENST00000493682 ERBB3P21860 1342 aa24.66■■□□□ 1.54
COL9A1-210ENST00000493682 NLRP2Q9NX02 1062 aa24.65■■□□□ 1.54
COL9A1-210ENST00000493682 EDC4Q6P2E9 1401 aaKnown RBP24.64■■□□□ 1.54
COL9A1-210ENST00000493682 PDGFDQ9GZP0 370 aaPredicted RBP24.64■■□□□ 1.54
COL9A1-210ENST00000493682 TONSLQ96HA7 1378 aa24.64■■□□□ 1.53
COL9A1-210ENST00000493682 CASZ1Q86V15 1759 aa24.63■■□□□ 1.53
COL9A1-210ENST00000493682 TXNRD1Q16881 649 aa24.63■■□□□ 1.53
COL9A1-210ENST00000493682 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
COL9A1-210ENST00000493682 NINLQ9Y2I6 1382 aa24.62■■□□□ 1.53
COL9A1-210ENST00000493682 LTN1O94822 1766 aa24.62■■□□□ 1.53
COL9A1-210ENST00000493682 ANKRD24Q8TF21 1146 aa24.61■■□□□ 1.53
COL9A1-210ENST00000493682 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
COL9A1-210ENST00000493682 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
COL9A1-210ENST00000493682 IL2RBP14784 551 aa24.6■■□□□ 1.53
COL9A1-210ENST00000493682 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
COL9A1-210ENST00000493682 ZBTB7AO95365 584 aa24.58■■□□□ 1.53
COL9A1-210ENST00000493682 ACSBG1Q96GR2 724 aa24.58■■□□□ 1.53
COL9A1-210ENST00000493682 NHSQ6T4R5 1651 aa24.58■■□□□ 1.53
COL9A1-210ENST00000493682 SLC15A2Q16348 729 aa24.57■■□□□ 1.52
COL9A1-210ENST00000493682 YY1P25490 414 aa24.55■■□□□ 1.52
COL9A1-210ENST00000493682 TESK2Q96S53 571 aa24.55■■□□□ 1.52
COL9A1-210ENST00000493682 PTGER2P43116 358 aa24.54■■□□□ 1.52
COL9A1-210ENST00000493682 ST20-MTHFSA0A0A6YYL1 179 aa24.53■■□□□ 1.52
COL9A1-210ENST00000493682 DCAF8L1A6NGE4 600 aa24.53■■□□□ 1.52
COL9A1-210ENST00000493682 IP6K1Q92551 441 aa24.53■■□□□ 1.52
COL9A1-210ENST00000493682 ATF5Q9Y2D1 282 aaPredicted RBP24.53■■□□□ 1.52
COL9A1-210ENST00000493682 LTV1Q96GA3 475 aaPredicted RBP24.5■■□□□ 1.51
COL9A1-210ENST00000493682 MYOM1P52179 1685 aa24.5■■□□□ 1.51
COL9A1-210ENST00000493682 BTAF1O14981 1849 aa24.48■■□□□ 1.51
COL9A1-210ENST00000493682 COG3Q96JB2 828 aa24.48■■□□□ 1.51
COL9A1-210ENST00000493682 MAP3K19Q56UN5 1328 aa24.47■■□□□ 1.51
COL9A1-210ENST00000493682 MTFR1LQ9H019 292 aa24.47■■□□□ 1.51
COL9A1-210ENST00000493682 PAPPAQ13219 1627 aa24.46■■□□□ 1.51
COL9A1-210ENST00000493682 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
COL9A1-210ENST00000493682 DDX54Q8TDD1 881 aaKnown RBP24.46■■□□□ 1.51
COL9A1-210ENST00000493682 FAM208AQ9UK61 1670 aaKnown RBP24.46■■□□□ 1.51
COL9A1-210ENST00000493682 FBLN1P23142 703 aa24.45■■□□□ 1.5
COL9A1-210ENST00000493682 HOXC9P31274 260 aa24.44■■□□□ 1.5
COL9A1-210ENST00000493682 SGIP1Q9BQI5 828 aa24.44■■□□□ 1.5
COL9A1-210ENST00000493682 LRRC4BQ9NT99 713 aa24.44■■□□□ 1.5
COL9A1-210ENST00000493682 AMPHP49418 695 aa24.43■■□□□ 1.5
COL9A1-210ENST00000493682 FHDC1Q9C0D6 1143 aaPredicted RBP24.43■■□□□ 1.5
COL9A1-210ENST00000493682 ANKRD36BQ8N2N9 1353 aa24.42■■□□□ 1.5
COL9A1-210ENST00000493682 ZNF827Q17R98 1081 aa24.42■■□□□ 1.5
COL9A1-210ENST00000493682 SYT17Q9BSW7 474 aa24.41■■□□□ 1.5
COL9A1-210ENST00000493682 KAT6BQ8WYB5 2073 aa24.39■■□□□ 1.5
COL9A1-210ENST00000493682 SLC27A3Q5K4L6 730 aa24.38■■□□□ 1.49
COL9A1-210ENST00000493682 FYB1O15117 783 aa24.37■■□□□ 1.49
COL9A1-210ENST00000493682 PRIM1P49642 420 aaKnown RBP24.37■■□□□ 1.49
COL9A1-210ENST00000493682 AKT1S1Q96B36 256 aa24.37■■□□□ 1.49
COL9A1-210ENST00000493682 ARXQ96QS3 562 aa24.37■■□□□ 1.49
COL9A1-210ENST00000493682 TMF1P82094 1093 aa24.36■■□□□ 1.49
COL9A1-210ENST00000493682 RRS1Q15050 365 aaKnown RBP24.36■■□□□ 1.49
COL9A1-210ENST00000493682 ZCRB1Q8TBF4 217 aaKnown RBP24.36■■□□□ 1.49
COL9A1-210ENST00000493682 SYTL4Q96C24 671 aaPredicted RBP24.36■■□□□ 1.49
COL9A1-210ENST00000493682 RTL1A6NKG5 1358 aa24.36■■□□□ 1.49
COL9A1-210ENST00000493682 MEGF6O75095 1541 aa24.35■■□□□ 1.49
COL9A1-210ENST00000493682 RGPD2P0DJD1 1756 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms