RNA–Protein interactions for RNA: ENST00000493653.1

PDS5B-208, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 972 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-208ENST00000493653 NFAT5O94916 1531 aa16.8■□□□□ 0.28
PDS5B-208ENST00000493653 COL18A1P39060 1754 aa16.79■□□□□ 0.28
PDS5B-208ENST00000493653 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
PDS5B-208ENST00000493653 TTC21BQ7Z4L5 1316 aa16.79■□□□□ 0.28
PDS5B-208ENST00000493653 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
PDS5B-208ENST00000493653 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
PDS5B-208ENST00000493653 KTN1Q86UP2 1357 aaKnown RBP16.78■□□□□ 0.28
PDS5B-208ENST00000493653 PSDA5PKW4 1024 aaPredicted RBP16.78■□□□□ 0.28
PDS5B-208ENST00000493653 SOX12O15370 315 aa16.78■□□□□ 0.28
PDS5B-208ENST00000493653 TTC21AQ8NDW8 1320 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 TRIM37O94972 964 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 PDE3BQ13370 1112 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 RREB1Q92766 1687 aa16.77■□□□□ 0.28
PDS5B-208ENST00000493653 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
PDS5B-208ENST00000493653 PLCB2Q00722 1185 aa16.76■□□□□ 0.27
PDS5B-208ENST00000493653 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
PDS5B-208ENST00000493653 ABCC6O95255 1503 aa16.75■□□□□ 0.27
PDS5B-208ENST00000493653 NUP188Q5SRE5 1749 aa16.75■□□□□ 0.27
PDS5B-208ENST00000493653 PEAK1Q9H792 1746 aa16.75■□□□□ 0.27
PDS5B-208ENST00000493653 RGPD5Q99666 1765 aa16.74■□□□□ 0.27
PDS5B-208ENST00000493653 OVOS2A0A0G2JMS6 1433 aa16.74■□□□□ 0.27
PDS5B-208ENST00000493653 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
PDS5B-208ENST00000493653 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
PDS5B-208ENST00000493653 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
PDS5B-208ENST00000493653 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
PDS5B-208ENST00000493653 WDR17Q8IZU2 1322 aa16.73■□□□□ 0.27
PDS5B-208ENST00000493653 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
PDS5B-208ENST00000493653 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
PDS5B-208ENST00000493653 PARD3Q8TEW0 1356 aa16.73■□□□□ 0.27
PDS5B-208ENST00000493653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■□□□ 12
PDS5B-208ENST00000493653 LTN1O94822 1766 aa16.72■□□□□ 0.27
PDS5B-208ENST00000493653 APBA3O96018 575 aa16.71■□□□□ 0.27
PDS5B-208ENST00000493653 ARHGEF25Q86VW2 580 aa16.71■□□□□ 0.27
PDS5B-208ENST00000493653 TMC1Q8TDI8 760 aa16.71■□□□□ 0.27
PDS5B-208ENST00000493653 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
PDS5B-208ENST00000493653 AXIN2Q9Y2T1 843 aa16.71■□□□□ 0.27
PDS5B-208ENST00000493653 A0A1W2PP64 1363 aa16.71■□□□□ 0.27
PDS5B-208ENST00000493653 R3HDM1Q15032 1099 aaKnown RBP16.7■□□□□ 0.26
PDS5B-208ENST00000493653 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
PDS5B-208ENST00000493653 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
PDS5B-208ENST00000493653 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
PDS5B-208ENST00000493653 CSB-PGBD3P0DP91 1061 aa16.69■□□□□ 0.26
PDS5B-208ENST00000493653 NME9Q86XW9 330 aa16.69■□□□□ 0.26
PDS5B-208ENST00000493653 RGPD3A6NKT7 1758 aaPredicted RBP16.69■□□□□ 0.26
PDS5B-208ENST00000493653 RGPD4Q7Z3J3 1758 aa16.69■□□□□ 0.26
PDS5B-208ENST00000493653 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
PDS5B-208ENST00000493653 DDB1Q16531 1140 aa16.68■□□□□ 0.26
PDS5B-208ENST00000493653 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
PDS5B-208ENST00000493653 SBF2Q86WG5 1849 aa16.68■□□□□ 0.26
PDS5B-208ENST00000493653 TRIM26Q12899 539 aaPredicted RBP16.67■□□□□ 0.26
PDS5B-208ENST00000493653 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
PDS5B-208ENST00000493653 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
PDS5B-208ENST00000493653 CCDC7Q96M83 1385 aa16.64■□□□□ 0.26
PDS5B-208ENST00000493653 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
PDS5B-208ENST00000493653 CARD10Q9BWT7 1032 aa16.64■□□□□ 0.25
PDS5B-208ENST00000493653 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
PDS5B-208ENST00000493653 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
PDS5B-208ENST00000493653 ERBB3P21860 1342 aa16.64■□□□□ 0.25
PDS5B-208ENST00000493653 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
PDS5B-208ENST00000493653 C11orf95C9JLR9 678 aaPredicted RBP16.63■□□□□ 0.25
PDS5B-208ENST00000493653 TESK2Q96S53 571 aa16.63■□□□□ 0.25
PDS5B-208ENST00000493653 CDCA7Q9BWT1 371 aaPredicted RBP16.63■□□□□ 0.25
PDS5B-208ENST00000493653 USP47Q96K76 1375 aa16.62■□□□□ 0.25
PDS5B-208ENST00000493653 MARCH10Q8NA82 808 aaPredicted RBP16.61■□□□□ 0.25
PDS5B-208ENST00000493653 FAM208AQ9UK61 1670 aaKnown RBP16.61■□□□□ 0.25
PDS5B-208ENST00000493653 BCL9O00512 1426 aa16.61■□□□□ 0.25
PDS5B-208ENST00000493653 NHSQ6T4R5 1651 aa16.6■□□□□ 0.25
PDS5B-208ENST00000493653 PTF1AQ7RTS3 328 aa16.59■□□□□ 0.25
PDS5B-208ENST00000493653 PUS7Q96PZ0 661 aaKnown RBP16.59■□□□□ 0.25
PDS5B-208ENST00000493653 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
PDS5B-208ENST00000493653 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
PDS5B-208ENST00000493653 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
PDS5B-208ENST00000493653 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
PDS5B-208ENST00000493653 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
PDS5B-208ENST00000493653 MYOM1P52179 1685 aa16.56■□□□□ 0.24
PDS5B-208ENST00000493653 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
PDS5B-208ENST00000493653 EXOC5O00471 708 aa16.55■□□□□ 0.24
PDS5B-208ENST00000493653 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
PDS5B-208ENST00000493653 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
PDS5B-208ENST00000493653 IL2RBP14784 551 aa16.54■□□□□ 0.24
PDS5B-208ENST00000493653 COG3Q96JB2 828 aa16.54■□□□□ 0.24
PDS5B-208ENST00000493653 PLSCR1O15162 318 aa16.53■□□□□ 0.24
PDS5B-208ENST00000493653 TMF1P82094 1093 aa16.53■□□□□ 0.24
PDS5B-208ENST00000493653 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
PDS5B-208ENST00000493653 BTAF1O14981 1849 aa16.52■□□□□ 0.23
PDS5B-208ENST00000493653 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
PDS5B-208ENST00000493653 MAP3K19Q56UN5 1328 aa16.51■□□□□ 0.23
PDS5B-208ENST00000493653 IP6K1Q92551 441 aa16.51■□□□□ 0.23
PDS5B-208ENST00000493653 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
PDS5B-208ENST00000493653 KCNQ2O43526 872 aa16.5■□□□□ 0.23
PDS5B-208ENST00000493653 RGPD2P0DJD1 1756 aa16.5■□□□□ 0.23
PDS5B-208ENST00000493653 PAPPAQ13219 1627 aa16.49■□□□□ 0.23
PDS5B-208ENST00000493653 HOXC9P31274 260 aa16.49■□□□□ 0.23
PDS5B-208ENST00000493653 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
PDS5B-208ENST00000493653 SHANK3Q9BYB0 1731 aa16.49■□□□□ 0.23
PDS5B-208ENST00000493653 FBLN1P23142 703 aa16.48■□□□□ 0.23
PDS5B-208ENST00000493653 AMPHP49418 695 aa16.48■□□□□ 0.23
PDS5B-208ENST00000493653 TXNRD1Q16881 649 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms